CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43476	Soybean	nucleus	87.72	88.89
KRH20846	Soybean	nucleus	61.84	64.38
KRH27501	Soybean	nucleus	59.21	62.21
KRH38466	Soybean	nucleus	8.55	46.43
Zm00001d023444_P001	Maize	cytosol	4.61	44.68
VIT_13s0064g01290.t01	Wine grape	nucleus, plastid	35.75	42.56
Zm00001d051122_P001	Maize	nucleus	14.04	42.11
KRH44925	Soybean	nucleus	14.47	42.04
PGSC0003DMT400065029	Potato	nucleus	32.89	37.78
KRG93108	Soybean	extracellular	23.46	37.41
KRH71888	Soybean	nucleus, plastid	30.26	36.51
Solyc01g086870.2.1	Tomato	nucleus	32.46	36.36
KRH33007	Soybean	nucleus, plastid	30.48	36.2
GSMUA_Achr7P20490_001	Banana	nucleus	27.41	35.61
HORVU5Hr1G073170.5	Barley	cytosol, nucleus, plastid	14.25	35.52
Zm00001d006578_P001	Maize	nucleus	27.85	34.6
KRH67021	Soybean	nucleus	29.17	34.37
KRH29679	Soybean	nucleus	31.36	34.21
KRG95337	Soybean	nucleus	28.73	34.2
KRH23160	Soybean	nucleus	30.48	34.07
KRH24679	Soybean	nucleus	30.7	33.73
HORVU7Hr1G050530.1	Barley	cytosol	19.74	33.46
TraesCS7A01G245800.1	Wheat	nucleus	27.85	33.16
TraesCS7D01G244300.1	Wheat	nucleus, plastid	27.85	32.9
TraesCS7B01G145800.1	Wheat	nucleus, plastid	27.63	32.56
Os09t0487900-01	Rice	nucleus	28.51	32.42
GSMUA_Achr5P22310_001	Banana	nucleus	27.41	32.3
Os08t0506700-01	Rice	nucleus	27.85	31.83
Zm00001d031441_P001	Maize	nucleus	26.1	31.32
Zm00001d020932_P001	Maize	nucleus	27.85	31.13
Zm00001d021748_P001	Maize	plastid	25.44	31.02
Zm00001d006022_P001	Maize	nucleus, plastid	27.41	30.79
GSMUA_Achr3P11110_001	Banana	nucleus	26.54	30.71
KRH10175	Soybean	nucleus	26.75	29.61
TraesCS5B01G264300.1	Wheat	plastid	26.54	29.51
TraesCS5D01G272800.1	Wheat	plastid	26.75	29.4
TraesCS5A01G264800.1	Wheat	plastid	26.32	29.34
GSMUA_Achr9P27780_001	Banana	nucleus	26.54	29.16
OQU80938	Sorghum	nucleus	28.29	27.74
KXG35904	Sorghum	nucleus, plastid	26.97	27.7
HORVU2Hr1G073240.1	Barley	cytosol	9.21	25.61
HORVU7Hr1G047180.1	Barley	plastid	13.82	25.1

Protein Annotations

EntrezGene:100785696	MapMan:15.5.32	Gene3D:4.10.280.10	EMBL:ACUP02009798	ncoils:Coil	EnsemblPlantsGene:GLYMA_15G271900
GO:GO:0001046	GO:GO:0001228	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006366	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0045944	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	UniProt:K7ME64
EnsemblPlants:KRH13908	ProteinID:KRH13908	ProteinID:KRH13908.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR16223
PANTHER:PTHR16223:SF69	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI00029669BB	InterPro:bHLH_dom	SEG:seg

Description

hypothetical protein

Coordinates

chr15:-:50912530..50915606

Molecular Weight (calculated)

50727.1 Da

IEP (calculated)

6.508

GRAVY (calculated)

-0.686

Length

456 amino acids

Sequence
(BLAST)

001: MPFVPFKVIA KMSVMYSPVL NYSDVEYQLW KNQDMDSSIG HPQQHCHQSN SGLLRYCSAP SSMLASLIDN TIHGCVNEEP FTSENQQQQQ HYLPSTSSEM
101: ETMLSKMPPS NIGWSNSEPL QEFGGKPVKQ EIGQSVPQGP PKQNGYSYGG SQLIYQSQQI QGLPNGSSIA SISAFDGSFG AVNSMASEDS IQSKMGVRNC
201: SNLFRQKSSP AGFFSIENDL AALREVGSFK DNDVSNGQAT ASTSGLHSSL TFSSRSSSCL KQMPPQIAEN GNESLEENYD QSRNLVNDNG SSKCYIPSFT
301: NEFWESSAFN APKTENEDEI MFSTSNGLES QETDFSYQNH GLTHHLSLPS SSTKMSSIEM FLQIQGSVPY KIRAKRGFAT HPRSIAERER RTRISERIKK
401: LQDLFPRSEK PTSTADMLDL AVEHIKDLQQ QVQILSDRKA KCKCTRNEKH YTRTCA

Best Arabidopsis Sequence Match ( AT2G42280.1 )
(BLAST)

001: MDSNNHLYDP NPTGSGLLRF RSAPSSVLAA FVDDDKIGFD SDRLLSRFVT SNGVNGDLGS PKFEDKSPVS LTNTSVSYAA TLPPPPQLEP SSFLGLPPHY
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI

Arabidopsis Description

basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G42280]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.