Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P22310_001 | Banana | nucleus | 62.11 | 56.33 |
| KRH38466 | Soybean | nucleus | 12.25 | 51.19 |
| VIT_06s0004g01740.t01 | Wine grape | nucleus | 38.46 | 45.45 |
| VIT_08s0007g07810.t01 | Wine grape | nucleus | 43.59 | 38.83 |
| VIT_13s0064g01290.t01 | Wine grape | nucleus, plastid | 42.17 | 38.64 |
| KRH71888 | Soybean | nucleus, plastid | 40.46 | 37.57 |
| GSMUA_Achr3P11110_001 | Banana | nucleus | 41.88 | 37.31 |
| KRH24679 | Soybean | nucleus | 43.87 | 37.11 |
| GSMUA_Achr9P27780_001 | Banana | nucleus | 43.59 | 36.87 |
| KRH29679 | Soybean | nucleus | 43.87 | 36.84 |
| GSMUA_Achr1P27710_001 | Banana | nucleus | 34.47 | 36.12 |
| CDX79884 | Canola | nucleus, plastid | 33.62 | 36.09 |
| KRH23160 | Soybean | nucleus | 41.88 | 36.03 |
| KRH33007 | Soybean | nucleus, plastid | 39.32 | 35.94 |
| GSMUA_Achr8P01370_001 | Banana | nucleus | 33.05 | 35.91 |
| Bra004678.1-P | Field mustard | nucleus, plastid | 33.33 | 35.89 |
| CDY14822 | Canola | nucleus | 34.76 | 35.36 |
| PGSC0003DMT400021062 | Potato | nucleus | 38.18 | 35.26 |
| CDY53498 | Canola | nucleus, plastid | 32.48 | 35.08 |
| CDY47961 | Canola | nucleus | 34.76 | 35.06 |
| KRG95337 | Soybean | nucleus | 38.18 | 34.99 |
| Bra016886.1-P | Field mustard | nucleus | 34.47 | 34.77 |
| KRH67021 | Soybean | nucleus | 38.18 | 34.63 |
| Solyc10g079050.1.1 | Tomato | nucleus | 37.32 | 34.47 |
| AT2G42280.3 | Thale cress | nucleus | 34.76 | 33.89 |
| GSMUA_Achr6P21220_001 | Banana | vacuole | 26.78 | 33.69 |
| PGSC0003DMT400065029 | Potato | nucleus | 37.61 | 33.25 |
| Solyc01g086870.2.1 | Tomato | nucleus | 37.32 | 32.19 |
| Bra018896.1-P | Field mustard | nucleus | 33.05 | 32.13 |
| AT1G51140.1 | Thale cress | nucleus | 34.47 | 31.93 |
| CDY22828 | Canola | nucleus | 32.48 | 31.58 |
| Solyc12g100140.1.1 | Tomato | nucleus | 40.17 | 31.33 |
| CDY25213 | Canola | nucleus | 32.48 | 31.32 |
| KRH10175 | Soybean | nucleus | 35.33 | 30.1 |
| PGSC0003DMT400056716 | Potato | nucleus | 36.75 | 29.25 |
| KRH27501 | Soybean | nucleus | 35.61 | 28.8 |
| KRH43476 | Soybean | nucleus | 36.75 | 28.67 |
| PGSC0003DMT400061284 | Potato | nucleus | 39.89 | 28.63 |
| Solyc11g056650.1.1 | Tomato | nucleus | 35.9 | 28.57 |
| KRH20846 | Soybean | nucleus | 35.33 | 28.31 |
| GSMUA_Achr8P32130_001 | Banana | mitochondrion | 33.33 | 27.73 |
| KRH13908 | Soybean | extracellular, nucleus | 35.61 | 27.41 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P20490_001 | EnsemblPlants:GSMUA_Achr7T20490_001 | EnsemblPlantsGene:GSMUA_Achr7G20490_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF69 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000295C5E4 | UniProt:M0TJ86 | MapMan:15.5.32 | : |
Description
Putative Transcription factor bHLH130 [Source:GMGC_GENE;Acc:GSMUA_Achr7G20490_001]
Coordinates
chr7:+:23600768..23602581
Molecular Weight (calculated)
38168.8 Da
IEP (calculated)
8.362
GRAVY (calculated)
-0.617
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGLLRYRS APSSLLGEVC EEFDPVSAAS HETETMYARF LAPDPRDEVR DKPSGVAASS AGHSSPHVPP PPAAPEVNEQ QSRGFSSAPH TMFHLQQQQP
101: QQMPSHSSVE SSFPVSGSSS SLIRQSSSPA GFLSHLNANS GYGMMRGMGG FRDGSGFMMD GTHRSKGQLS FPSRQNSVLS HISEMESEEA MEGSSPRERS
201: GDGRSFISAF SVASWDESSL TSLNGQTMPQ NGEGRNHASG VPHQLSLPKS SPVMTAIEKF LQIHDAVPFK IRAKRGCATH PRSIAERVRR TRISERMKKL
301: QELVPNMDKQ TNTADMLDLA LDYIKNLQKQ VKALSESRAS CSCSASTHKL Y
101: QQMPSHSSVE SSFPVSGSSS SLIRQSSSPA GFLSHLNANS GYGMMRGMGG FRDGSGFMMD GTHRSKGQLS FPSRQNSVLS HISEMESEEA MEGSSPRERS
201: GDGRSFISAF SVASWDESSL TSLNGQTMPQ NGEGRNHASG VPHQLSLPKS SPVMTAIEKF LQIHDAVPFK IRAKRGCATH PRSIAERVRR TRISERMKKL
301: QELVPNMDKQ TNTADMLDLA LDYIKNLQKQ VKALSESRAS CSCSASTHKL Y
001: MDSNNHLYDP NPTGSGLLRF RSAPSSVLAA FVDDDKIGFD SDRLLSRFVT SNGVNGDLGS PKFEDKSPVS LTNTSVSYAA TLPPPPQLEP SSFLGLPPHY
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK VKFLIIVEKK QRGLFSLLLN
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK VKFLIIVEKK QRGLFSLLLN
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G42280]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.