CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10175	Soybean	nucleus	83.58	82.77
KRH38466	Soybean	nucleus	15.2	73.81
KRH29679	Soybean	nucleus	67.4	65.79
KRH24679	Soybean	nucleus	66.42	65.3
Zm00001d023444_P001	Maize	cytosol	7.35	63.83
VIT_06s0004g01740.t01	Wine grape	nucleus	41.91	57.58
Zm00001d051122_P001	Maize	nucleus	19.36	51.97
KRH44925	Soybean	nucleus	18.38	47.77
HORVU7Hr1G050530.1	Barley	cytosol	30.39	46.1
TraesCS7B01G145800.1	Wheat	nucleus, plastid	42.65	44.96
TraesCS7A01G245800.1	Wheat	nucleus	42.16	44.91
Zm00001d006578_P001	Maize	nucleus	39.95	44.41
TraesCS7D01G244300.1	Wheat	nucleus, plastid	41.91	44.3
HORVU5Hr1G073170.5	Barley	cytosol, nucleus, plastid	19.85	44.26
KRH71888	Soybean	nucleus, plastid	39.95	43.12
GSMUA_Achr5P22310_001	Banana	nucleus	40.44	42.64
KRH33007	Soybean	nucleus, plastid	39.71	42.19
Os08t0506700-01	Rice	nucleus	41.18	42.11
Zm00001d031441_P001	Maize	nucleus	39.22	42.11
GSMUA_Achr7P20490_001	Banana	nucleus	36.03	41.88
Zm00001d006022_P001	Maize	nucleus, plastid	41.42	41.63
Zm00001d020932_P001	Maize	nucleus	41.18	41.18
Bra018896.1-P	Field mustard	nucleus	35.78	40.44
CDY22828	Canola	nucleus	35.78	40.44
Zm00001d021748_P001	Maize	plastid	36.52	39.84
CDY25213	Canola	nucleus	35.29	39.56
KRG95337	Soybean	nucleus	36.03	38.38
AT1G51140.1	Thale cress	nucleus	35.54	38.26
KRH67021	Soybean	nucleus	35.54	37.47
Os09t0487900-01	Rice	nucleus	36.76	37.41
KRG93108	Soybean	extracellular	25.98	37.06
KXG35904	Sorghum	nucleus, plastid	40.2	36.94
Solyc12g100140.1.1	Tomato	nucleus	40.44	36.67
TraesCS5B01G264300.1	Wheat	plastid	36.76	36.59
OQU80938	Sorghum	nucleus	41.42	36.34
TraesCS5A01G264800.1	Wheat	plastid	36.27	36.19
TraesCS5D01G272800.1	Wheat	plastid	36.76	36.14
Solyc11g056650.1.1	Tomato	nucleus	38.48	35.6
PGSC0003DMT400056716	Potato	nucleus	38.24	35.37
GSMUA_Achr3P11110_001	Banana	nucleus	33.58	34.77
PGSC0003DMT400061284	Potato	nucleus	40.93	34.15
GSMUA_Achr9P27780_001	Banana	nucleus	34.56	33.98
KRH27501	Soybean	nucleus	33.82	31.8
KRH20846	Soybean	nucleus	33.82	31.51
KRH43476	Soybean	nucleus	34.56	31.33
HORVU2Hr1G073240.1	Barley	cytosol	12.5	31.1
KRH13908	Soybean	extracellular, nucleus	34.07	30.48
HORVU7Hr1G047180.1	Barley	plastid	16.42	26.69

Protein Annotations

EntrezGene:100805812	MapMan:15.5.32	Gene3D:4.10.280.10	EMBL:ACUP02008457	EnsemblPlantsGene:GLYMA_13G341700	GO:GO:0001046
GO:GO:0001228	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006366	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	UniProt:I1M528	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KRH23160
ProteinID:KRH23160	ProteinID:KRH23160.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR16223	PANTHER:PTHR16223:SF69
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000233AF78	InterPro:bHLH_dom	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:+:43342075..43345305

Molecular Weight (calculated)

45173.0 Da

IEP (calculated)

6.630

GRAVY (calculated)

-0.805

Length

408 amino acids

Sequence
(BLAST)

001: MESDLEQQPQ VNSSGLTRYR SAPSSYFSNI IDREFYEHVF NRPSSPETER VFSRFMNSLN SEEEDSLHHH KLSTDSSSSS AAVKEEVVNQ HNQSVNEEHV
101: VVAALQQSNN NMNSYNNSAS RNFYQSSSSK PPLPNPNPNL SSGMEQGSFS MGLRHSGNNS NLIRHSSSPA GLFSQINIEN VYAGVRGMGT LGAVNNSIED
201: AKFSSSRRLK NQPNYSSSGR MSSIAEIGDK GNRESSPDNE AFADGNDFIT GFQVGHWDDA AIMSDNVGGL KRFRENDSKP FSGLNAAETQ NETGQTHAPL
301: AHQLSLPNTS AEIAAIEKFL QFSDSVPCKI RAKRGCATHP RSIAERVRRT KISERMRKLQ DLVPNMDKQT NTADMLDLAV DYIKDLQKQV QTLSDCHAKC
401: TCSHEKQQ

Best Arabidopsis Sequence Match ( AT1G51140.1 )
(BLAST)

001: MESEFQQHHF LLHDHQHQRP RNSGLIRYQS APSSYFSSFG ESIEEFLDRP TSPETERILS GFLQTTDTSD NVDSFLHHTF NSDGTEKKPP EVKTEDEDAE
101: IPVTATATAM EVVVSGDGEI SVNPEVSIGY VASVSRNKRP REKDDRTPVN NLARHNSSPA GLFSSIDVET AYAAVMKSMG GFGGSNVMST SNTEASSLTP
201: RSKLLPPTSR AMSPISEVDV KPGFSSRLPP RTLSGGFNRS FGNEGSASSK LTALARTQSG GLDQYKTKDE DSASRRPPLA HHMSLPKSLS DIEQLLSDSI
301: PCKIRAKRGC ATHPRSIAER VRRTKISERM RKLQDLVPNM DTQTNTADML DLAVQYIKDL QEQVKALEES RARCRCSSA

Arabidopsis Description

BHLH122Transcription factor bHLH122 [Source:UniProtKB/Swiss-Prot;Acc:Q9C690]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.