Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023444_P001 | Maize | cytosol | 6.99 | 61.7 |
| Zm00001d051122_P001 | Maize | nucleus | 19.28 | 52.63 |
| GSMUA_Achr3P11110_001 | Banana | nucleus | 49.64 | 52.28 |
| KRH38466 | Soybean | nucleus | 9.88 | 48.81 |
| HORVU7Hr1G050530.1 | Barley | cytosol | 28.67 | 44.24 |
| GSMUA_Achr7P20490_001 | Banana | nucleus | 36.87 | 43.59 |
| VIT_06s0004g01740.t01 | Wine grape | nucleus | 30.36 | 42.42 |
| HORVU5Hr1G073170.5 | Barley | cytosol, nucleus, plastid | 18.07 | 40.98 |
| Zm00001d006578_P001 | Maize | nucleus | 36.14 | 40.87 |
| TraesCS7B01G145800.1 | Wheat | nucleus, plastid | 38.07 | 40.83 |
| TraesCS7D01G244300.1 | Wheat | nucleus, plastid | 37.83 | 40.67 |
| Zm00001d031441_P001 | Maize | nucleus | 37.11 | 40.53 |
| TraesCS7A01G245800.1 | Wheat | nucleus | 37.35 | 40.47 |
| Os08t0506700-01 | Rice | nucleus | 38.07 | 39.6 |
| GSMUA_Achr5P22310_001 | Banana | nucleus | 36.63 | 39.28 |
| KRH71888 | Soybean | nucleus, plastid | 35.42 | 38.89 |
| VIT_08s0007g07810.t01 | Wine grape | nucleus | 36.87 | 38.83 |
| Bra004678.1-P | Field mustard | nucleus, plastid | 29.64 | 37.73 |
| CDY47961 | Canola | nucleus | 31.57 | 37.64 |
| CDX79884 | Canola | nucleus, plastid | 29.64 | 37.61 |
| Zm00001d020932_P001 | Maize | nucleus | 36.87 | 37.5 |
| Zm00001d006022_P001 | Maize | nucleus, plastid | 36.63 | 37.44 |
| Os09t0487900-01 | Rice | nucleus | 36.14 | 37.41 |
| Bra016886.1-P | Field mustard | nucleus | 31.33 | 37.36 |
| Zm00001d021748_P001 | Maize | plastid | 33.49 | 37.17 |
| CDY14822 | Canola | nucleus | 30.84 | 37.1 |
| KRH33007 | Soybean | nucleus, plastid | 34.22 | 36.98 |
| CDY53498 | Canola | nucleus, plastid | 28.92 | 36.92 |
| TraesCS5A01G264800.1 | Wheat | plastid | 35.42 | 35.94 |
| AT2G42280.3 | Thale cress | nucleus | 31.08 | 35.83 |
| PGSC0003DMT400021062 | Potato | nucleus | 32.77 | 35.79 |
| TraesCS5D01G272800.1 | Wheat | plastid | 35.66 | 35.66 |
| TraesCS5B01G264300.1 | Wheat | plastid | 35.18 | 35.61 |
| Solyc10g079050.1.1 | Tomato | nucleus | 32.53 | 35.53 |
| PGSC0003DMT400065029 | Potato | nucleus | 33.49 | 35.01 |
| KXG35904 | Sorghum | nucleus, plastid | 37.11 | 34.68 |
| KRH23160 | Soybean | nucleus | 33.98 | 34.56 |
| VIT_13s0064g01290.t01 | Wine grape | nucleus, plastid | 31.81 | 34.46 |
| KRG95337 | Soybean | nucleus | 31.57 | 34.2 |
| OQU80938 | Sorghum | nucleus | 38.31 | 34.19 |
| KRH67021 | Soybean | nucleus | 31.57 | 33.85 |
| GSMUA_Achr1P27710_001 | Banana | nucleus | 27.23 | 33.73 |
| Solyc01g086870.2.1 | Tomato | nucleus | 33.01 | 33.66 |
| KRH29679 | Soybean | nucleus | 33.73 | 33.49 |
| KRH24679 | Soybean | nucleus | 33.25 | 33.25 |
| GSMUA_Achr8P01370_001 | Banana | nucleus | 25.3 | 32.51 |
| KRH27501 | Soybean | nucleus | 33.25 | 31.8 |
| GSMUA_Achr6P21220_001 | Banana | vacuole | 20.96 | 31.18 |
| AT1G51140.1 | Thale cress | nucleus | 28.19 | 30.87 |
| Bra018896.1-P | Field mustard | nucleus | 26.27 | 30.19 |
| KRH20846 | Soybean | nucleus | 31.81 | 30.14 |
| HORVU2Hr1G073240.1 | Barley | cytosol | 11.81 | 29.88 |
| KRH10175 | Soybean | nucleus | 29.64 | 29.85 |
| CDY25213 | Canola | nucleus | 26.02 | 29.67 |
| CDY22828 | Canola | nucleus | 25.78 | 29.64 |
| Solyc12g100140.1.1 | Tomato | nucleus | 32.05 | 29.56 |
| KRH43476 | Soybean | nucleus | 30.12 | 27.78 |
| PGSC0003DMT400061284 | Potato | nucleus | 32.05 | 27.2 |
| HORVU7Hr1G047180.1 | Barley | plastid | 16.14 | 26.69 |
| KRH13908 | Soybean | extracellular, nucleus | 29.16 | 26.54 |
| Solyc11g056650.1.1 | Tomato | nucleus | 27.71 | 26.08 |
| GSMUA_Achr8P32130_001 | Banana | mitochondrion | 26.27 | 25.83 |
| PGSC0003DMT400056716 | Potato | nucleus | 27.23 | 25.62 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P27780_001 | EnsemblPlants:GSMUA_Achr9T27780_001 | EnsemblPlantsGene:GSMUA_Achr9G27780_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR16223 | PANTHER:PTHR16223:SF69 | PFAM:PF00010 | PFscan:PS50888 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000296BC3D | UniProt:M0U435 | MapMan:15.5.32 | : | : | : |
Description
Putative Transcription factor bHLH130 [Source:GMGC_GENE;Acc:GSMUA_Achr9G27780_001]
Coordinates
chr9:-:31947278..31949334
Molecular Weight (calculated)
45510.5 Da
IEP (calculated)
8.488
GRAVY (calculated)
-0.762
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGAPPATAT SKDLDLGYPP AAPLGGHRKE EPESAGLHVL LHHPPAQQEQ VSPGLLRFRS APSSLFEELC EDFLPARPYG AETDEPSVVD TVDCQRRPQF
101: WRPPPSGEKV SPQHKVASSS SLPMTHHHTQ QPLQMPNHSL SDISYRTMGS MLAEVEQHEN GGGRTFANLT RQSSSPAIVS SHNGYPMMRD LRGFRNEGLP
201: PMGEAAKRFR GHQLSLGKRQ SSLMSRISET GSEEFGRGSH EESGCYMPGW DETSLLSANS FAGTRKGSEG EDKTGAGLNH SEPQKGEVRN HVSGVTHQLG
301: LPKTSSEMAA VENFLRFQDA VPCRIRAKRG CATHPRSIAE RVRRTKISER MKKLQEVVPN MDKQTNTADM LNLAVDYIKD LQKQVKTLTE GRASCSCLSS
401: NQNSYLNSKS GARGS
101: WRPPPSGEKV SPQHKVASSS SLPMTHHHTQ QPLQMPNHSL SDISYRTMGS MLAEVEQHEN GGGRTFANLT RQSSSPAIVS SHNGYPMMRD LRGFRNEGLP
201: PMGEAAKRFR GHQLSLGKRQ SSLMSRISET GSEEFGRGSH EESGCYMPGW DETSLLSANS FAGTRKGSEG EDKTGAGLNH SEPQKGEVRN HVSGVTHQLG
301: LPKTSSEMAA VENFLRFQDA VPCRIRAKRG CATHPRSIAE RVRRTKISER MKKLQEVVPN MDKQTNTADM LNLAVDYIKD LQKQVKTLTE GRASCSCLSS
401: NQNSYLNSKS GARGS
001: MDSNNHLYDP NPTGSGLLRF RSAPSSVLAA FVDDDKIGFD SDRLLSRFVT SNGVNGDLGS PKFEDKSPVS LTNTSVSYAA TLPPPPQLEP SSFLGLPPHY
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G42280]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.