Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018896.1-P | Field mustard | nucleus | 99.45 | 99.45 |
| CDY25213 | Canola | nucleus | 98.06 | 97.25 |
| AT1G51140.1 | Thale cress | nucleus | 84.76 | 80.74 |
| Zm00001d023444_P001 | Maize | cytosol | 7.2 | 55.32 |
| CDY70200 | Canola | nucleus | 13.57 | 48.51 |
| Zm00001d051122_P001 | Maize | nucleus | 18.84 | 44.74 |
| KRH38466 | Soybean | nucleus | 9.7 | 41.67 |
| VIT_06s0004g01740.t01 | Wine grape | nucleus | 33.8 | 41.08 |
| HORVU5Hr1G073170.5 | Barley | cytosol, nucleus, plastid | 19.67 | 38.8 |
| CDX79884 | Canola | nucleus, plastid | 32.69 | 36.09 |
| KRH23160 | Soybean | nucleus | 40.44 | 35.78 |
| KRH29679 | Soybean | nucleus | 40.72 | 35.17 |
| CDY53498 | Canola | nucleus, plastid | 31.58 | 35.08 |
| CDY14822 | Canola | nucleus | 33.52 | 35.07 |
| CDY47961 | Canola | nucleus | 33.52 | 34.77 |
| KRH24679 | Soybean | nucleus | 39.61 | 34.46 |
| CDX83499 | Canola | nucleus | 18.84 | 33.5 |
| CDY42800 | Canola | nucleus | 18.56 | 33.0 |
| HORVU7Hr1G050530.1 | Barley | cytosol | 24.38 | 32.71 |
| GSMUA_Achr7P20490_001 | Banana | nucleus | 31.58 | 32.48 |
| CDY41870 | Canola | nucleus | 21.88 | 32.38 |
| GSMUA_Achr5P22310_001 | Banana | nucleus | 34.63 | 32.3 |
| TraesCS7A01G245800.1 | Wheat | nucleus | 33.52 | 31.59 |
| CDY69278 | Canola | nucleus | 21.05 | 31.41 |
| TraesCS7D01G244300.1 | Wheat | nucleus, plastid | 33.52 | 31.35 |
| Zm00001d006578_P001 | Maize | nucleus | 31.86 | 31.34 |
| Zm00001d031441_P001 | Maize | nucleus | 32.96 | 31.32 |
| CDX91761 | Canola | nucleus | 21.33 | 31.3 |
| CDY28415 | Canola | nucleus | 21.05 | 31.28 |
| TraesCS7B01G145800.1 | Wheat | nucleus, plastid | 33.52 | 31.27 |
| CDY61281 | Canola | nucleus | 21.33 | 30.68 |
| Os08t0506700-01 | Rice | nucleus | 33.52 | 30.33 |
| KRH10175 | Soybean | nucleus | 34.07 | 29.85 |
| Zm00001d020932_P001 | Maize | nucleus | 33.52 | 29.66 |
| Zm00001d006022_P001 | Maize | nucleus, plastid | 32.96 | 29.31 |
| GSMUA_Achr3P11110_001 | Banana | nucleus | 31.86 | 29.19 |
| Os09t0487900-01 | Rice | nucleus | 32.13 | 28.93 |
| TraesCS5D01G272800.1 | Wheat | plastid | 32.96 | 28.67 |
| TraesCS5B01G264300.1 | Wheat | plastid | 32.13 | 28.29 |
| CDY17944 | Canola | nucleus | 24.1 | 27.97 |
| TraesCS5A01G264800.1 | Wheat | plastid | 31.58 | 27.87 |
| Zm00001d021748_P001 | Maize | plastid | 28.81 | 27.81 |
| Solyc12g100140.1.1 | Tomato | nucleus | 34.63 | 27.78 |
| CDY51319 | Canola | nucleus, plastid | 27.7 | 27.78 |
| CDY10149 | Canola | nucleus, plastid | 26.87 | 27.56 |
| CDY30384 | Canola | nucleus | 23.27 | 27.36 |
| PGSC0003DMT400056716 | Potato | nucleus | 32.69 | 26.76 |
| OQU80938 | Sorghum | nucleus | 33.8 | 26.24 |
| Solyc11g056650.1.1 | Tomato | nucleus | 31.86 | 26.08 |
| KXG35904 | Sorghum | nucleus, plastid | 31.86 | 25.9 |
| GSMUA_Achr9P27780_001 | Banana | nucleus | 29.64 | 25.78 |
| HORVU2Hr1G073240.1 | Barley | cytosol | 11.63 | 25.61 |
| PGSC0003DMT400061284 | Potato | nucleus | 34.35 | 25.36 |
| CDY66632 | Canola | cytosol, nucleus, plastid | 11.08 | 24.24 |
| HORVU7Hr1G047180.1 | Barley | plastid | 15.79 | 22.71 |
| CDY10155 | Canola | nucleus, plastid | 13.57 | 17.38 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078GDV3 | UniProt:A0A078GDV3 | EnsemblPlants:CDY22828 | ProteinID:CDY22828 |
| ProteinID:CDY22828.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00021175001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR16223 | PANTHER:PTHR16223:SF69 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EECDBD | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g02490DBnaA06g02490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDV3]
Coordinates
chrLK032136:-:361481..363550
Molecular Weight (calculated)
39938.9 Da
IEP (calculated)
7.103
GRAVY (calculated)
-0.694
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MESEFQQHHF LLHDHQHQRP PRASGLVRYQ SAPSSYFSSF GESIEEFLDR PTSPETERIL SGFLQTTDTS NNVDSFLHHT FSETENKPPE VKTEEETVVD
101: DIPAMEVGEM APPVSTGYAS VVRSLGQNKR PRDDRTPASN LARHNSSPAG LFSSIDVETA YAAVMKNMGG FGVMNMSNNS TEASSLTPRS KLPPPSMGSI
201: PEVDDVKPVF SSRLPPRTLS GGFNQGSASS KRMAIARTQS GGLDQYKTKD EDSSASRRPP LAHHMSLPKS LSDIEQLLSD SIPCKIRAKR GCATHPRSIA
301: ERVRRTKISE RMRKLQDLVP NMDTQTNTAD MLDLAVQYIK DLQEQVKGLE DSRARCRCSC A
101: DIPAMEVGEM APPVSTGYAS VVRSLGQNKR PRDDRTPASN LARHNSSPAG LFSSIDVETA YAAVMKNMGG FGVMNMSNNS TEASSLTPRS KLPPPSMGSI
201: PEVDDVKPVF SSRLPPRTLS GGFNQGSASS KRMAIARTQS GGLDQYKTKD EDSSASRRPP LAHHMSLPKS LSDIEQLLSD SIPCKIRAKR GCATHPRSIA
301: ERVRRTKISE RMRKLQDLVP NMDTQTNTAD MLDLAVQYIK DLQEQVKGLE DSRARCRCSC A
001: MESEFQQHHF LLHDHQHQRP RNSGLIRYQS APSSYFSSFG ESIEEFLDRP TSPETERILS GFLQTTDTSD NVDSFLHHTF NSDGTEKKPP EVKTEDEDAE
101: IPVTATATAM EVVVSGDGEI SVNPEVSIGY VASVSRNKRP REKDDRTPVN NLARHNSSPA GLFSSIDVET AYAAVMKSMG GFGGSNVMST SNTEASSLTP
201: RSKLLPPTSR AMSPISEVDV KPGFSSRLPP RTLSGGFNRS FGNEGSASSK LTALARTQSG GLDQYKTKDE DSASRRPPLA HHMSLPKSLS DIEQLLSDSI
301: PCKIRAKRGC ATHPRSIAER VRRTKISERM RKLQDLVPNM DTQTNTADML DLAVQYIKDL QEQVKALEES RARCRCSSA
101: IPVTATATAM EVVVSGDGEI SVNPEVSIGY VASVSRNKRP REKDDRTPVN NLARHNSSPA GLFSSIDVET AYAAVMKSMG GFGGSNVMST SNTEASSLTP
201: RSKLLPPTSR AMSPISEVDV KPGFSSRLPP RTLSGGFNRS FGNEGSASSK LTALARTQSG GLDQYKTKDE DSASRRPPLA HHMSLPKSLS DIEQLLSDSI
301: PCKIRAKRGC ATHPRSIAER VRRTKISERM RKLQDLVPNM DTQTNTADML DLAVQYIKDL QEQVKALEES RARCRCSSA
Arabidopsis Description
BHLH122Transcription factor bHLH122 [Source:UniProtKB/Swiss-Prot;Acc:Q9C690]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.