Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G264800.1 | Wheat | plastid | 92.53 | 93.89 |
| TraesCS5B01G264300.1 | Wheat | plastid | 92.05 | 93.17 |
| Os09t0487900-01 | Rice | nucleus | 64.1 | 66.33 |
| Zm00001d020932_P001 | Maize | nucleus | 64.58 | 65.69 |
| Zm00001d006022_P001 | Maize | nucleus, plastid | 61.69 | 63.05 |
| TraesCS7D01G244300.1 | Wheat | nucleus, plastid | 57.11 | 61.4 |
| KXG35904 | Sorghum | nucleus, plastid | 63.37 | 59.23 |
| HORVU5Hr1G073170.5 | Barley | cytosol, nucleus, plastid | 23.13 | 52.46 |
| KRH38466 | Soybean | nucleus | 9.64 | 47.62 |
| VIT_06s0004g01740.t01 | Wine grape | nucleus | 31.57 | 44.11 |
| CDY53498 | Canola | nucleus, plastid | 30.12 | 38.46 |
| Bra004678.1-P | Field mustard | nucleus, plastid | 30.12 | 38.34 |
| CDX79884 | Canola | nucleus, plastid | 30.12 | 38.23 |
| GSMUA_Achr3P11110_001 | Banana | nucleus | 35.9 | 37.82 |
| AT2G42280.3 | Thale cress | nucleus | 32.29 | 37.22 |
| VIT_13s0064g01290.t01 | Wine grape | nucleus, plastid | 34.22 | 37.08 |
| VIT_08s0007g07810.t01 | Wine grape | nucleus | 35.18 | 37.06 |
| KRH23160 | Soybean | nucleus | 36.14 | 36.76 |
| PGSC0003DMT400021062 | Potato | nucleus | 33.49 | 36.58 |
| CDY14822 | Canola | nucleus | 30.36 | 36.52 |
| KRH71888 | Soybean | nucleus, plastid | 33.25 | 36.51 |
| CDY47961 | Canola | nucleus | 30.36 | 36.21 |
| Solyc10g079050.1.1 | Tomato | nucleus | 33.01 | 36.05 |
| Bra016886.1-P | Field mustard | nucleus | 30.12 | 35.92 |
| KRH33007 | Soybean | nucleus, plastid | 33.01 | 35.68 |
| GSMUA_Achr9P27780_001 | Banana | nucleus | 35.66 | 35.66 |
| KRH24679 | Soybean | nucleus | 35.42 | 35.42 |
| KRH67021 | Soybean | nucleus | 32.77 | 35.14 |
| PGSC0003DMT400065029 | Potato | nucleus | 33.49 | 35.01 |
| KRG95337 | Soybean | nucleus | 32.05 | 34.73 |
| KRH29679 | Soybean | nucleus | 34.94 | 34.69 |
| Solyc01g086870.2.1 | Tomato | nucleus | 32.53 | 33.17 |
| CDY22828 | Canola | nucleus | 28.67 | 32.96 |
| Bra018896.1-P | Field mustard | nucleus | 28.67 | 32.96 |
| AT1G51140.1 | Thale cress | nucleus | 29.88 | 32.72 |
| CDY25213 | Canola | nucleus | 28.43 | 32.42 |
| TraesCS6D01G197500.1 | Wheat | nucleus | 23.86 | 32.14 |
| KRH10175 | Soybean | nucleus | 30.6 | 30.83 |
| KRH27501 | Soybean | nucleus | 31.33 | 29.95 |
| Solyc12g100140.1.1 | Tomato | nucleus | 32.29 | 29.78 |
| KRH20846 | Soybean | nucleus | 31.33 | 29.68 |
| TraesCS3D01G388700.1 | Wheat | nucleus | 25.78 | 29.23 |
| PGSC0003DMT400056716 | Potato | nucleus | 30.6 | 28.8 |
| Solyc11g056650.1.1 | Tomato | nucleus | 29.88 | 28.12 |
| PGSC0003DMT400061284 | Potato | nucleus | 33.01 | 28.02 |
| KRH43476 | Soybean | nucleus | 30.36 | 28.0 |
| KRH13908 | Soybean | extracellular, nucleus | 29.4 | 26.75 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR16223 | PANTHER:PTHR16223:SF55 | SMART:SM00353 | SUPFAM:SSF47459 | EnsemblPlantsGene:TraesCS5D01G272800 | EnsemblPlants:TraesCS5D01G272800.1 |
| InterPro:bHLH_dom | TIGR:cd00083 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5D:+:375677282..375679383
Molecular Weight (calculated)
43349.1 Da
IEP (calculated)
8.989
GRAVY (calculated)
-0.534
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGAPLSKDL NLPAQQQPAA NGVRTPPQMS SPGLLRYRSA PSAMFGDVCG EFLPASAGAG AGAGHRHGSP DHAADTGFAR LLSGHHHHQH HPEMRDKPPR
101: PAASHFAEDA ANSMASQQQL MYQSQQQMAA MEGLFRTAGS GGTDPVVAGV GGNDSLLRQS SSPAGFLNHL NMDNGYGSML RAGMAGAAGG GGYRNGDARL
201: KGQLSFSSRQ GSVMSQISEM VGEEMGGGSS GDDEAGSNGG CYGGIPGYPV VAPSAAAGWD EPSPSPSPSL LTSDGLSGPA AKRRPRDGGA NGAARQLKPQ
301: FSLPAGSKPS PSPEIAAIEK FLQFQDSVPC KIRAKRGCAT HPRSIAERVR RTKISERIRK LQELVPNMEK QTNTSDMLDL AVDYIKELQM QVKVMNDGRA
401: SCTCAAGRAP RNFAS
101: PAASHFAEDA ANSMASQQQL MYQSQQQMAA MEGLFRTAGS GGTDPVVAGV GGNDSLLRQS SSPAGFLNHL NMDNGYGSML RAGMAGAAGG GGYRNGDARL
201: KGQLSFSSRQ GSVMSQISEM VGEEMGGGSS GDDEAGSNGG CYGGIPGYPV VAPSAAAGWD EPSPSPSPSL LTSDGLSGPA AKRRPRDGGA NGAARQLKPQ
301: FSLPAGSKPS PSPEIAAIEK FLQFQDSVPC KIRAKRGCAT HPRSIAERVR RTKISERIRK LQELVPNMEK QTNTSDMLDL AVDYIKELQM QVKVMNDGRA
401: SCTCAAGRAP RNFAS
001: MDSNNHLYDP NPTGSGLLRF RSAPSSVLAA FVDDDKIGFD SDRLLSRFVT SNGVNGDLGS PKFEDKSPVS LTNTSVSYAA TLPPPPQLEP SSFLGLPPHY
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
101: PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET
201: NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVRRTR
301: ISERMRKLQE LVPNMDKQTN TSDMLDLAVD YIKDLQRQYK ILNDNRANCK CMNKEKKSI
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G42280]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.