CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27501	Soybean	nucleus	90.41	91.24
KRH43476	Soybean	nucleus	65.53	63.78
KRH13908	Soybean	extracellular, nucleus	64.38	61.84
Zm00001d023444_P001	Maize	cytosol	6.16	57.45
Zm00001d051122_P001	Maize	nucleus	15.07	43.42
VIT_13s0064g01290.t01	Wine grape	nucleus, plastid	37.9	43.34
KRH44925	Soybean	nucleus	15.53	43.31
KRH38466	Soybean	nucleus	8.22	42.86
KRH33007	Soybean	nucleus, plastid	35.16	40.1
KRH71888	Soybean	nucleus, plastid	34.25	39.68
KRG93108	Soybean	extracellular	25.8	39.51
PGSC0003DMT400065029	Potato	nucleus	35.39	39.04
Solyc01g086870.2.1	Tomato	nucleus	35.39	38.08
HORVU7Hr1G050530.1	Barley	cytosol	22.6	36.8
Zm00001d006578_P001	Maize	nucleus	30.37	36.24
KRG95337	Soybean	nucleus	31.51	36.03
TraesCS7A01G245800.1	Wheat	nucleus	31.28	35.77
KRH67021	Soybean	nucleus	31.51	35.66
HORVU5Hr1G073170.5	Barley	cytosol, nucleus, plastid	14.84	35.52
TraesCS7D01G244300.1	Wheat	nucleus, plastid	31.28	35.49
TraesCS7B01G145800.1	Wheat	nucleus, plastid	31.28	35.4
GSMUA_Achr7P20490_001	Banana	nucleus	28.31	35.33
KRH24679	Soybean	nucleus	32.88	34.7
KRH29679	Soybean	nucleus	33.1	34.69
Os08t0506700-01	Rice	nucleus	31.51	34.59
GSMUA_Achr5P22310_001	Banana	nucleus	30.37	34.37
Os09t0487900-01	Rice	nucleus	31.28	34.16
KRH23160	Soybean	nucleus	31.51	33.82
GSMUA_Achr3P11110_001	Banana	nucleus	30.37	33.76
Zm00001d031441_P001	Maize	nucleus	29.0	33.42
Zm00001d006022_P001	Maize	nucleus, plastid	30.82	33.25
Zm00001d020932_P001	Maize	nucleus	30.82	33.09
Zm00001d021748_P001	Maize	plastid	28.08	32.89
GSMUA_Achr9P27780_001	Banana	nucleus	30.14	31.81
TraesCS5B01G264300.1	Wheat	plastid	29.45	31.46
TraesCS5D01G272800.1	Wheat	plastid	29.68	31.33
TraesCS5A01G264800.1	Wheat	plastid	29.0	31.05
KXG35904	Sorghum	nucleus, plastid	30.82	30.41
OQU80938	Sorghum	nucleus	31.28	29.46
KRH10175	Soybean	nucleus	27.4	29.13
HORVU2Hr1G073240.1	Barley	cytosol	10.5	28.05
HORVU7Hr1G047180.1	Barley	plastid	14.61	25.5

Protein Annotations

EntrezGene:100795896	MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:A0A0R0H312	EMBL:ACUP02008320	EnsemblPlantsGene:GLYMA_13G204400
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	EnsemblPlants:KRH20846	ProteinID:KRH20846	ProteinID:KRH20846.1	ProteinID:KRH20847.1	PFAM:PF00010
PFscan:PS50888	PANTHER:PTHR16223	PANTHER:PTHR16223:SF69	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000233BD9C
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:31852699..31857082

Molecular Weight (calculated)

48347.1 Da

IEP (calculated)

8.611

GRAVY (calculated)

-0.800

Length

438 amino acids

Sequence
(BLAST)

001: MSIVYSHAVK YSRGETRMNP EMDSNIGQHC HQQNSGLMRY RSAPSSLLTS LVNNNNNNNG YVNGESFRSE HNHHHHQQQQ QQHYPPSTSS EMENMLAKLI
101: SSNNSEPLQM KEEAGDSVSQ PPQQHNGYSY GSSPQMMYQT QQIQGLPIPN GSLGASGSAF DGSFSAVNSL ASQNSTQPKM GASTNCNNLI RQKSSPAGFF
201: SNYSVDNAAL RDVASFRGCD VSNGQAITSS SGLHGTLNFS SRPSSCSTRM PQIAENGNED VEANCVESRN LRNDNINNTK CYMPSFTTDF WDGSAFSASR
301: TASNSGEISF STSKAMDIQD EDFGYQKVGL THHLSLPGSS SRMATMEKLY QIQGSVPCKI RAKRGFATHP RSIAERERRT RISARIKKLQ DLFPKSDKQT
401: STADMLDLAV EYIKDLQKQV KILRDTRAKC TCTSNQKH

Best Arabidopsis Sequence Match ( AT2G43140.2 )
(BLAST)

001: MYPPNSSKST AHDGGGDADT NQYDSAAGAT RDFSSLGPQT HHHPPPQRQQ QHQQNPNLVG HYLPGEPSSI GFDSNASSSS SLFRHRSSPA GFYDQHLPTD
101: PNGFSLGRPN GGYGGGGEQG PSRLKSELRF SSGSSSHQEH NSLPRISEVE AAAAARNGVA SSSMSFGNNR TNNWDNSSSH ISFTIDQPGK RSKNSDFFTL
201: ETQYSMPQTT LEMATMENLM NIPEDSVPCR ARAKRGFATH PRSIAERERR TRISGKLKKL QELVPNMDKQ TSYADMLDLA VEHIKGLQHQ VESLEKGMER
301: CTCGACKKR

Arabidopsis Description

Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IQ66]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.