Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr1P27710_001 | Banana | nucleus | 66.87 | 64.48 |
CDY70200 | Canola | nucleus | 16.41 | 52.48 |
GSMUA_Achr8P32130_001 | Banana | mitochondrion | 65.02 | 49.76 |
KRG93108 | Soybean | extracellular | 41.49 | 46.85 |
GSMUA_Achr6P21220_001 | Banana | vacuole | 39.94 | 46.24 |
Zm00001d042482_P001 | Maize | nucleus | 50.15 | 44.75 |
Os01t0900800-01 | Rice | nucleus | 52.32 | 43.67 |
TraesCS3D01G388700.1 | Wheat | nucleus | 49.23 | 43.44 |
TraesCS3B01G426900.1 | Wheat | nucleus | 48.61 | 42.32 |
TraesCS3A01G395000.1 | Wheat | nucleus | 48.61 | 42.32 |
HORVU3Hr1G089090.2 | Barley | nucleus | 49.23 | 42.06 |
VIT_05s0124g00240.t01 | Wine grape | plastid | 45.51 | 41.64 |
Bra000291.1-P | Field mustard | nucleus | 25.39 | 40.39 |
CDX83499 | Canola | nucleus | 25.39 | 40.39 |
CDY42800 | Canola | nucleus | 25.08 | 39.9 |
KXG33923 | Sorghum | plastid | 51.39 | 38.07 |
PGSC0003DMT400016793 | Potato | nucleus, plastid | 40.56 | 37.64 |
Solyc09g098110.2.1 | Tomato | nucleus, plastid | 40.87 | 36.97 |
CDY51319 | Canola | nucleus, plastid | 39.94 | 35.83 |
Bra015456.1-P | Field mustard | nucleus, plastid | 39.94 | 35.83 |
CDY10149 | Canola | nucleus, plastid | 37.77 | 34.66 |
AT1G05805.1 | Thale cress | nucleus, plastid | 38.7 | 34.53 |
AT2G43140.2 | Thale cress | nucleus | 32.51 | 33.98 |
CDY30384 | Canola | nucleus | 32.2 | 33.88 |
Bra004748.1-P | Field mustard | nucleus | 31.89 | 33.66 |
CDY66632 | Canola | cytosol, nucleus, plastid | 17.03 | 33.33 |
CDY17944 | Canola | nucleus | 31.89 | 33.12 |
GSMUA_Achr7P20490_001 | Banana | nucleus | 35.91 | 33.05 |
Bra037732.1-P | Field mustard | nucleus | 30.96 | 32.89 |
GSMUA_Achr5P22310_001 | Banana | nucleus | 36.53 | 30.49 |
GSMUA_Achr3P11110_001 | Banana | nucleus | 33.13 | 27.16 |
CDY10155 | Canola | nucleus, plastid | 22.6 | 25.89 |
GSMUA_Achr9P27780_001 | Banana | nucleus | 32.51 | 25.3 |
Protein Annotations
MapMan:15.5.32 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0046983 | EnsemblPlantsGene:GSMUA_Achr8G01370_001 | EnsemblPlants:GSMUA_Achr8P01370_001 | EnsemblPlants:GSMUA_Achr8T01370_001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
InterPro:IPR036638 | UniProt:M0TLN9 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF33 |
SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000295571D | InterPro:bHLH_dom | SEG:seg | : |
Description
Putative Transcription factor bHLH128 [Source:GMGC_GENE;Acc:GSMUA_Achr8G01370_001]
Coordinates
chr8:-:1153313..1157891
Molecular Weight (calculated)
34979.6 Da
IEP (calculated)
6.997
GRAVY (calculated)
-0.678
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRSPTDGNE LEASGLGLSR YGSDPGSLLA GVASEGGGIS RFAPAGEDSS SSCRGSDRGP RGPYEPDEVH AAVDLAAKVG GGPALVRHSS SPAGFFSRLL
101: MDHGLSSPSG IGSYSRTGNG GAHTVASRRL RSQWSFSRKD TLSHISEMSI PEIGEDVDCD SSSDEATAHV EQSFISGNFQ LSSWDDSNSI MFSAPHKRTK
201: GNNGDILTSL SNTDSQFNLS KNSLEVSSIE KYLQLQQDSV PCRVRAKRGC ATHPRSIAER ERRTRISKRL QKLHNLVPNM DKQTSTSDML ELAIQYIKEL
301: QSQVQKLKQE QEDCICTSRQ EKA
101: MDHGLSSPSG IGSYSRTGNG GAHTVASRRL RSQWSFSRKD TLSHISEMSI PEIGEDVDCD SSSDEATAHV EQSFISGNFQ LSSWDDSNSI MFSAPHKRTK
201: GNNGDILTSL SNTDSQFNLS KNSLEVSSIE KYLQLQQDSV PCRVRAKRGC ATHPRSIAER ERRTRISKRL QKLHNLVPNM DKQTSTSDML ELAIQYIKEL
301: QSQVQKLKQE QEDCICTSRQ EKA
001: MYQSSSSTSS SSQRSSLPGG GGLIRYGSAP GSFLNSVVDE VIGGGSSNAR DFTGYQPSSD NFIGNFFTGA ADSSSLRSDS TTCGVNNSSD GQKQLGNNNN
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
Arabidopsis Description
BHLH128Transcription factor bHLH128 [Source:UniProtKB/Swiss-Prot;Acc:Q8H102]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.