Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plasma membrane 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
23777608
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G197500.1 | Wheat | nucleus | 58.76 | 33.77 |
| TraesCS6B01G244800.1 | Wheat | nucleus | 57.63 | 33.66 |
| TraesCS6A01G214900.1 | Wheat | nucleus | 58.76 | 33.12 |
| HORVU6Hr1G054910.7 | Barley | nucleus | 58.19 | 31.79 |
| Zm00001d017138_P001 | Maize | nucleus | 55.37 | 30.15 |
| EES05388 | Sorghum | nucleus | 55.37 | 28.99 |
| CDY70200 | Canola | nucleus | 15.82 | 27.72 |
| CDY66632 | Canola | cytosol, nucleus, plastid | 23.73 | 25.45 |
| GSMUA_Achr6P21220_001 | Banana | vacuole | 35.59 | 22.58 |
| Os04t0489600-02 | Rice | nucleus | 46.33 | 22.22 |
| CDY42800 | Canola | nucleus | 23.73 | 20.69 |
| CDX83499 | Canola | nucleus | 22.6 | 19.7 |
| Bra000291.1-P | Field mustard | nucleus | 22.6 | 19.7 |
| KRG93108 | Soybean | extracellular | 29.38 | 18.18 |
| PGSC0003DMT400016793 | Potato | nucleus, plastid | 34.46 | 17.53 |
| Os01t0900800-01 | Rice | nucleus | 35.03 | 16.02 |
| Solyc09g098110.2.1 | Tomato | nucleus, plastid | 32.2 | 15.97 |
| Bra037732.1-P | Field mustard | nucleus | 26.55 | 15.46 |
| VIT_05s0124g00240.t01 | Wine grape | plastid | 29.94 | 15.01 |
| CDY30384 | Canola | nucleus | 25.99 | 14.98 |
| CDY10149 | Canola | nucleus, plastid | 29.38 | 14.77 |
| CDY51319 | Canola | nucleus, plastid | 29.94 | 14.72 |
| Bra015456.1-P | Field mustard | nucleus, plastid | 29.94 | 14.72 |
| Bra004748.1-P | Field mustard | nucleus | 25.42 | 14.71 |
| CDY17944 | Canola | nucleus | 25.42 | 14.47 |
| AT1G05805.1 | Thale cress | nucleus, plastid | 28.81 | 14.09 |
| AT2G43140.2 | Thale cress | nucleus | 24.29 | 13.92 |
| Os08t0506700-01 | Rice | nucleus | 30.51 | 13.53 |
| Os09t0487900-01 | Rice | nucleus | 26.55 | 11.72 |
| CDY10155 | Canola | nucleus, plastid | 16.38 | 10.28 |
Protein Annotations
| MapMan:35.2 | UniProt:A0A0P0VLP4 | ProteinID:BAS79640.1 | GO:GO:0001046 | GO:GO:0001228 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006366 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:Os02g0603600 |
| EnsemblPlants:Os02t0603600-01 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF51 | UniParc:UPI000224CF52 | SEG:seg | : |
Description
basic helix-loop-helix protein 110Conserved hypothetical protein. (Os02t0603600-01)
Coordinates
chr2:+:23643455..23651476
Molecular Weight (calculated)
18267.1 Da
IEP (calculated)
7.296
GRAVY (calculated)
-0.459
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNGFPGSK GGGGSGAEAH HHPSMAGSGS GSSSGGRKMK SQLSFTAGPP HLSHIAEDGA FPDRAGAEAS VPRTFSAGGS SGGGGFSIVG PWEESRDIIS
101: TLGGYESQFG GMASTSALEM AGMDRYLQLQ HDQVPFKVRA KRGCATHPRS IAERVRTQYH DQNASIFAFA FSSDLDT
101: TLGGYESQFG GMASTSALEM AGMDRYLQLQ HDQVPFKVRA KRGCATHPRS IAERVRTQYH DQNASIFAFA FSSDLDT
001: MYQSSSSTSS SSQRSSLPGG GGLIRYGSAP GSFLNSVVDE VIGGGSSNAR DFTGYQPSSD NFIGNFFTGA ADSSSLRSDS TTCGVNNSSD GQKQLGNNNN
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
Arabidopsis Description
BHLH128Transcription factor bHLH128 [Source:UniProtKB/Swiss-Prot;Acc:Q8H102]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.