Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69311 | Canola | nucleus | 82.94 | 84.73 |
| Bra011769.1-P | Field mustard | nucleus | 82.71 | 82.71 |
| CDX75659 | Canola | nucleus | 82.71 | 82.71 |
| TraesCSU01G217300.1 | Wheat | cytosol | 28.04 | 55.56 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 25.47 | 54.77 |
| AT3G11520.1 | Thale cress | nucleus | 52.57 | 54.35 |
| PGSC0003DMT400018480 | Potato | nucleus | 52.8 | 53.18 |
| Solyc10g078330.1.1 | Tomato | nucleus | 52.1 | 52.72 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 54.91 | 51.88 |
| KRH66715 | Soybean | nucleus | 46.96 | 51.28 |
| AT5G06150.1 | Thale cress | nucleus | 52.8 | 50.79 |
| KRG95055 | Soybean | nucleus | 53.74 | 50.55 |
| AT2G26760.1 | Thale cress | nucleus | 45.56 | 50.39 |
| KRH66713 | Soybean | nucleus | 53.04 | 50.0 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 53.74 | 49.78 |
| HORVU0Hr1G001680.1 | Barley | nucleus | 37.15 | 49.69 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 48.83 | 49.18 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 52.34 | 49.02 |
| KRH66718 | Soybean | plastid | 42.29 | 48.53 |
| Zm00001d019469_P001 | Maize | extracellular | 16.12 | 48.25 |
| PGSC0003DMT400072211 | Potato | nucleus | 52.1 | 48.06 |
| Solyc10g080950.1.1 | Tomato | nucleus | 51.87 | 48.05 |
| KXG24389 | Sorghum | nucleus | 28.04 | 47.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.94 | 47.32 |
| KRG95056 | Soybean | cytosol | 42.52 | 47.03 |
| HORVU1Hr1G068080.1 | Barley | plastid | 37.38 | 46.78 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 43.93 | 46.77 |
| GSMUA_Achr10P... | Banana | nucleus | 48.83 | 46.14 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 46.03 | 45.29 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 44.16 | 45.0 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 45.09 | 44.06 |
| TraesCS3D01G326600.1 | Wheat | nucleus | 46.73 | 43.96 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 46.5 | 43.93 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 45.79 | 43.65 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 44.39 | 43.58 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 44.39 | 43.58 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 44.39 | 43.48 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 44.16 | 43.35 |
| TraesCS3A01G333000.2 | Wheat | nucleus | 46.5 | 43.26 |
| EES03772 | Sorghum | nucleus, plastid | 45.33 | 43.21 |
| TraesCS3B01G363200.3 | Wheat | nucleus | 46.5 | 43.17 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 43.93 | 43.12 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 43.46 | 41.99 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 43.46 | 41.99 |
| Zm00001d010656_P001 | Maize | nucleus | 43.22 | 41.48 |
| TraesCS3D01G195200.1 | Wheat | plastid | 39.72 | 41.16 |
| Zm00001d043164_P002 | Maize | nucleus | 46.5 | 41.12 |
| EES18429 | Sorghum | mitochondrion | 44.16 | 41.09 |
| TraesCS3A01G192100.1 | Wheat | nucleus, plastid | 39.49 | 40.82 |
| Os01t0281200-01 | Rice | nucleus | 40.19 | 40.66 |
| Os05t0493500-00 | Rice | nucleus | 44.16 | 38.81 |
| EES02793 | Sorghum | nucleus | 39.49 | 36.5 |
| Zm00001d008221_P001 | Maize | nucleus | 39.95 | 35.7 |
| TraesCS7A01G229300.1 | Wheat | endoplasmic reticulum | 27.34 | 35.56 |
| AT2G17620.1 | Thale cress | nucleus | 34.81 | 34.73 |
| Os02t0627800-00 | Rice | cytosol, mitochondrion, peroxisome | 32.01 | 34.6 |
| AT4G35620.1 | Thale cress | nucleus | 34.35 | 34.27 |
| HORVU3Hr1G040990.2 | Barley | nucleus, plastid | 39.02 | 33.94 |
| AT1G20610.1 | Thale cress | nucleus | 32.71 | 32.63 |
| AT1G47220.1 | Thale cress | nucleus | 24.07 | 31.5 |
| AT1G34460.5 | Thale cress | cytosol | 35.98 | 30.92 |
| AT1G47210.2 | Thale cress | nucleus | 26.64 | 30.65 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 18.93 | 30.57 |
| Zm00001d020033_P001 | Maize | nucleus | 38.78 | 30.51 |
| AT1G76310.3 | Thale cress | nucleus | 32.24 | 30.07 |
| Zm00001d020996_P001 | Maize | nucleus | 38.08 | 29.96 |
| AT5G43080.1 | Thale cress | nucleus | 24.77 | 29.86 |
| AT1G47230.2 | Thale cress | nucleus, plastid | 24.53 | 28.38 |
| AT1G44110.1 | Thale cress | plastid | 30.37 | 28.26 |
| AT1G77390.1 | Thale cress | plastid | 28.74 | 27.83 |
| AT5G11300.1 | Thale cress | plastid | 27.1 | 26.61 |
| AT5G25380.4 | Thale cress | plastid | 25.93 | 25.06 |
| AT1G80370.1 | Thale cress | plastid | 26.4 | 24.51 |
| AT1G15570.1 | Thale cress | nucleus, plastid | 25.47 | 24.22 |
| AT1G16330.1 | Thale cress | nucleus | 32.01 | 21.14 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | EntrezGene:829904 | UniProt:A0A178UZN5 | ProteinID:AEE86801.1 | ArrayExpress:AT4G37490 |
| EnsemblPlantsGene:AT4G37490 | RefSeq:AT4G37490 | TAIR:AT4G37490 | RefSeq:AT4G37490-TAIR-G | EnsemblPlants:AT4G37490.1 | TAIR:AT4G37490.1 |
| Unigene:At.27 | EMBL:BT029006 | ProteinID:CAB38216.1 | ProteinID:CAB80414.1 | Symbol:CYC1 | InterPro:Cyclin-like |
| InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0001558 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010332 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0040007 | GO:GO:0051301 | EMBL:M80190 | RefSeq:NP_195465.1 | ProteinID:OAO98963.1 | UniProt:P30183 |
| PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000025 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001052 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0000127587 | EMBL:X62279 | EMBL:Z26397 | SEG:seg | : | : |
Description
CYCB1-1Cyclin-B1-1 [Source:UniProtKB/Swiss-Prot;Acc:P30183]
Coordinates
chr4:-:17621886..17624308
Molecular Weight (calculated)
48462.4 Da
IEP (calculated)
8.776
GRAVY (calculated)
-0.368
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTSRSIVPQ QSTDDVVVVD GKNVAKGRNR QVLGDIGNVV RGNYPKNNEP EKINHRPRTR SQNPTLLVED NLKKPVVKRN AVPKPKKVAG KPKVVDVIEI
101: SSDSDEELGL VAAREKKATK KKATTYTSVL TARSKAACGL EKKQKEKIVD IDSADVENDL AAVEYVEDIY SFYKSVESEW RPRDYMASQP DINEKMRLIL
201: VEWLIDVHVR FELNPETFYL TVNILDRFLS VKPVPRKELQ LVGLSALLMS AKYEEIWPPQ VEDLVDIADH AYSHKQILVM EKTILSTLEW YLTVPTHYVF
301: LARFIKASIA DEKMENMVHY LAELGVMHYD TMIMFSPSMV AASAIYAARS SLRQVPIWTS TLKHHTGYSE TQLMDCAKLL AYQQWKQQEE GSESSTKGAL
401: RKKYSKDERF AVALIPPAKA LLTGTESA
101: SSDSDEELGL VAAREKKATK KKATTYTSVL TARSKAACGL EKKQKEKIVD IDSADVENDL AAVEYVEDIY SFYKSVESEW RPRDYMASQP DINEKMRLIL
201: VEWLIDVHVR FELNPETFYL TVNILDRFLS VKPVPRKELQ LVGLSALLMS AKYEEIWPPQ VEDLVDIADH AYSHKQILVM EKTILSTLEW YLTVPTHYVF
301: LARFIKASIA DEKMENMVHY LAELGVMHYD TMIMFSPSMV AASAIYAARS SLRQVPIWTS TLKHHTGYSE TQLMDCAKLL AYQQWKQQEE GSESSTKGAL
401: RKKYSKDERF AVALIPPAKA LLTGTESA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.