Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020996_P001 | Maize | nucleus | 98.71 | 98.71 |
| Zm00001d008221_P001 | Maize | nucleus | 79.78 | 90.61 |
| Zm00001d019469_P001 | Maize | extracellular | 23.53 | 89.51 |
| EES02793 | Sorghum | nucleus | 70.77 | 83.15 |
| Os01t0281200-01 | Rice | nucleus | 49.63 | 63.83 |
| TraesCS3D01G195200.1 | Wheat | plastid | 47.06 | 61.99 |
| TraesCS3A01G192100.1 | Wheat | nucleus, plastid | 47.06 | 61.84 |
| Os02t0627800-00 | Rice | cytosol, mitochondrion, peroxisome | 39.71 | 54.55 |
| HORVU3Hr1G040990.2 | Barley | nucleus, plastid | 46.88 | 51.83 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 17.28 | 47.24 |
| PGSC0003DMT400058457 | Potato | nucleus | 33.46 | 43.54 |
| KRH66715 | Soybean | nucleus | 31.25 | 43.37 |
| PGSC0003DMT400018480 | Potato | nucleus | 33.64 | 43.06 |
| PGSC0003DMT400015245 | Potato | nucleus | 34.74 | 43.05 |
| VIT_06s0009g02090.t01 | Wine grape | nucleus | 32.72 | 42.58 |
| Solyc10g078330.1.1 | Tomato | nucleus | 33.09 | 42.55 |
| Solyc06g073610.2.1 | Tomato | nucleus | 34.19 | 42.27 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 35.11 | 42.16 |
| AT2G26760.1 | Thale cress | nucleus | 29.78 | 41.86 |
| Solyc01g009040.2.1 | Tomato | nucleus | 33.27 | 41.61 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 34.19 | 41.43 |
| KRG95055 | Soybean | nucleus | 34.56 | 41.32 |
| AT3G11520.1 | Thale cress | nucleus | 31.43 | 41.3 |
| Bra002046.1-P | Field mustard | nucleus | 29.78 | 41.22 |
| Bra028741.1-P | Field mustard | nucleus | 31.43 | 41.2 |
| KRH66713 | Soybean | nucleus | 33.82 | 40.53 |
| CDY69551 | Canola | nucleus | 26.29 | 40.28 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 34.19 | 40.26 |
| KRH73516 | Soybean | nucleus | 32.54 | 40.23 |
| Bra005880.1-P | Field mustard | nucleus, plastid | 30.51 | 40.1 |
| KRH14611 | Soybean | nucleus | 32.35 | 40.09 |
| CDY62475 | Canola | nucleus | 25.74 | 39.89 |
| CDX69311 | Canola | nucleus | 30.7 | 39.86 |
| KRH66718 | Soybean | plastid | 27.02 | 39.41 |
| Solyc10g080950.1.1 | Tomato | nucleus | 33.46 | 39.39 |
| CDX75659 | Canola | nucleus | 30.88 | 39.25 |
| CDX80988 | Canola | plastid | 30.88 | 39.25 |
| Bra011769.1-P | Field mustard | nucleus | 30.88 | 39.25 |
| CDY11354 | Canola | plastid | 31.07 | 39.03 |
| PGSC0003DMT400072211 | Potato | nucleus | 33.27 | 39.01 |
| AT5G06150.1 | Thale cress | nucleus | 31.8 | 38.88 |
| AT4G37490.1 | Thale cress | nucleus | 30.51 | 38.78 |
| Zm00001d043164_P002 | Maize | nucleus | 34.38 | 38.64 |
| Zm00001d010656_P001 | Maize | nucleus | 31.62 | 38.56 |
| KRG95056 | Soybean | cytosol | 25.74 | 36.18 |
| Zm00001d026129_P001 | Maize | nucleus | 27.57 | 35.21 |
| Zm00001d036360_P002 | Maize | nucleus | 26.1 | 33.49 |
| Zm00001d002662_P010 | Maize | nucleus | 27.94 | 33.41 |
| Zm00001d032128_P001 | Maize | cytosol | 8.09 | 27.85 |
| Zm00001d033365_P002 | Maize | nucleus | 18.75 | 27.42 |
| CDY14091 | Canola | plastid | 31.62 | 26.22 |
| Zm00001d013744_P001 | Maize | nucleus | 17.1 | 26.05 |
| AT1G34460.5 | Thale cress | cytosol | 22.06 | 24.1 |
| CDY04980 | Canola | nucleus | 31.25 | 23.68 |
| Zm00001d030849_P001 | Maize | nucleus | 18.01 | 23.17 |
| Zm00001d014756_P006 | Maize | nucleus, plastid | 22.06 | 23.03 |
| Zm00001d041334_P001 | Maize | nucleus, plastid | 18.01 | 22.43 |
| Zm00001d021353_P002 | Maize | mitochondrion, nucleus | 8.09 | 22.0 |
| Zm00001d023732_P002 | Maize | mitochondrion, nucleus, plastid | 19.49 | 21.86 |
| Zm00001d040381_P001 | Maize | plastid | 20.77 | 21.2 |
| Zm00001d009011_P001 | Maize | nucleus, plastid | 18.93 | 20.2 |
| Zm00001d048127_P001 | Maize | plastid | 16.73 | 19.0 |
| Zm00001d010404_P001 | Maize | nucleus | 16.73 | 18.76 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | Gene3D:2.30.29.30 | UniProt:A0A1D6I1P2 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:IPR011993 | ProteinID:ONM54127.1 | PFAM:PF00134 | PFAM:PF02984 | InterPro:PH-like_dom_sf | PIRSF:PIRSF001771 |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF211 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | SUPFAM:SSF50729 |
| UniParc:UPI00084353BF | EnsemblPlantsGene:Zm00001d020033 | EnsemblPlants:Zm00001d020033_P001 | EnsemblPlants:Zm00001d020033_T001 | SEG:seg | : |
Description
Cyclin-B1-4
Coordinates
chr7:-:87290868..87295819
Molecular Weight (calculated)
61654.2 Da
IEP (calculated)
9.599
GRAVY (calculated)
-0.206
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTSTEDMRE APTVTEVLYK WTNIGKGWQS RWFAIHDGVL SYSEWIHAFH RASYAKSWNS AMFLQCQQVQ KDAARLVRKP MDTFPQPAAA RGRRALVDVG
101: NLMNGRPSLV NHQKQAVAAA ATSHKPLNVG NKKPLVPQAA ARGMRPLADV TNLMINDRAA PANRQKPLDA VFNRNGKAVK LKECKVKPEV IVTIPDSEKE
201: KKGKLPGGQR VCRRVPTLFD NLTKCSRYEH KQNSKVKVVS FFFILRMPVY PFCVLCVFTK ASDGITTPKK KDPYDIDAPD SCNELAVVEY VEDIYRFYKS
301: TEGTCRPLSS YMSSQAEISE RMRAILIDWI IEVQYRLTLM PETLYLTVYI IDQYLSMESV PRKELQLVGI SAMLIASKYE EIWAPLVKDL MCLCDNAFTR
401: DQVLTKEKAI LDRLHWNLTV PTMYMFIVRY LKAAMCDTEL ENMAFFYSEL ALVHYAMLVY PPSVTAAAAV YAARSTLGMN PPWTDILEHH TGLAEPQLLE
501: CARRLISFHT LAPESKQKAV YRKYSKPKLG SVALQSPVKK LLSG
101: NLMNGRPSLV NHQKQAVAAA ATSHKPLNVG NKKPLVPQAA ARGMRPLADV TNLMINDRAA PANRQKPLDA VFNRNGKAVK LKECKVKPEV IVTIPDSEKE
201: KKGKLPGGQR VCRRVPTLFD NLTKCSRYEH KQNSKVKVVS FFFILRMPVY PFCVLCVFTK ASDGITTPKK KDPYDIDAPD SCNELAVVEY VEDIYRFYKS
301: TEGTCRPLSS YMSSQAEISE RMRAILIDWI IEVQYRLTLM PETLYLTVYI IDQYLSMESV PRKELQLVGI SAMLIASKYE EIWAPLVKDL MCLCDNAFTR
401: DQVLTKEKAI LDRLHWNLTV PTMYMFIVRY LKAAMCDTEL ENMAFFYSEL ALVHYAMLVY PPSVTAAAAV YAARSTLGMN PPWTDILEHH TGLAEPQLLE
501: CARRLISFHT LAPESKQKAV YRKYSKPKLG SVALQSPVKK LLSG
001: MASSRVSDLP HQRGIAGEIK PKNVAGHGRQ NRKVLGDIGN LVTGRDVATG KDVAKKAKQP QQQTKAEVIV ISPDENEKCK PHFSRRTHIR GTKTFTATLR
101: ARSKAASGLK DAVIDIDAVD ANNELAAVEY VEDIFKFYRT VEEEGGIKDY IGSQPEINEK MRSILIDWLV DVHRKFELMP ETLYLTINLV DRFLSLTMVH
201: RRELQLLGLG AMLIACKYEE IWAPEVNDFV CISDNAYNRK QVLAMEKSIL GQVEWYITVP TPYVFLARYV KAAVPCDAEM EKLVFYLAEL GLMQYPIVVL
301: NRPSMLAASA VYAARQILKK TPFWTETLKH HTGYSEDEIM EHAKMLMKLR DSASESKLIA VFKKYSVSEN AEVALLPSLD DFSVSCA
101: ARSKAASGLK DAVIDIDAVD ANNELAAVEY VEDIFKFYRT VEEEGGIKDY IGSQPEINEK MRSILIDWLV DVHRKFELMP ETLYLTINLV DRFLSLTMVH
201: RRELQLLGLG AMLIACKYEE IWAPEVNDFV CISDNAYNRK QVLAMEKSIL GQVEWYITVP TPYVFLARYV KAAVPCDAEM EKLVFYLAEL GLMQYPIVVL
301: NRPSMLAASA VYAARQILKK TPFWTETLKH HTGYSEDEIM EHAKMLMKLR DSASESKLIA VFKKYSVSEN AEVALLPSLD DFSVSCA
Arabidopsis Description
CYCB1-4CYCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VPU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.