Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- mitochondrion 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11354 | Canola | plastid | 95.56 | 94.46 |
| AT5G06150.1 | Thale cress | nucleus | 84.58 | 81.35 |
| CDY69551 | Canola | nucleus | 55.14 | 66.48 |
| CDY62475 | Canola | nucleus | 54.44 | 66.38 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 26.64 | 57.29 |
| TraesCSU01G217300.1 | Wheat | cytosol | 27.8 | 55.09 |
| CDY14091 | Canola | plastid | 81.54 | 53.2 |
| KRH66715 | Soybean | nucleus | 47.66 | 52.04 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 54.91 | 51.88 |
| KRG95055 | Soybean | nucleus | 54.67 | 51.43 |
| CDX69311 | Canola | nucleus | 50.23 | 51.31 |
| KRH66713 | Soybean | nucleus | 54.21 | 51.1 |
| Zm00001d019469_P001 | Maize | extracellular | 17.06 | 51.05 |
| CDX75659 | Canola | nucleus | 50.47 | 50.47 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 50.0 | 50.35 |
| Solyc10g078330.1.1 | Tomato | nucleus | 48.36 | 48.94 |
| AT1G34460.5 | Thale cress | cytosol | 56.78 | 48.8 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 52.57 | 48.7 |
| CDY04980 | Canola | nucleus | 81.31 | 48.47 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.64 | 48.32 |
| KRH66718 | Soybean | plastid | 42.06 | 48.26 |
| PGSC0003DMT400018480 | Potato | nucleus | 47.43 | 47.76 |
| HORVU0Hr1G001680.1 | Barley | nucleus | 35.51 | 47.5 |
| Solyc10g080950.1.1 | Tomato | nucleus | 51.17 | 47.4 |
| EES03772 | Sorghum | nucleus, plastid | 49.53 | 47.22 |
| PGSC0003DMT400072211 | Potato | nucleus | 50.93 | 46.98 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 49.77 | 46.61 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 47.2 | 46.44 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 47.2 | 46.33 |
| GSMUA_Achr10P... | Banana | nucleus | 48.83 | 46.14 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 43.22 | 46.02 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 46.73 | 45.87 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 47.66 | 45.43 |
| KXG24389 | Sorghum | nucleus | 26.64 | 45.24 |
| HORVU1Hr1G068080.1 | Barley | plastid | 35.98 | 45.03 |
| KRG95056 | Soybean | cytosol | 40.65 | 44.96 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 45.79 | 44.95 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 43.93 | 44.76 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 45.56 | 44.62 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 45.79 | 44.24 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 45.79 | 44.24 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 46.73 | 44.15 |
| TraesCS3B01G363200.3 | Wheat | nucleus | 47.2 | 43.82 |
| TraesCS3D01G326600.1 | Wheat | nucleus | 46.5 | 43.74 |
| TraesCS3A01G333000.2 | Wheat | nucleus | 46.73 | 43.48 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 44.39 | 43.38 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 44.16 | 43.35 |
| CDY31481 | Canola | nucleus | 21.96 | 43.32 |
| Zm00001d043164_P002 | Maize | nucleus | 47.9 | 42.36 |
| Zm00001d010656_P001 | Maize | nucleus | 42.99 | 41.26 |
| Os01t0281200-01 | Rice | nucleus | 39.95 | 40.43 |
| EES18429 | Sorghum | mitochondrion | 42.99 | 40.0 |
| TraesCS3A01G192100.1 | Wheat | nucleus, plastid | 38.08 | 39.37 |
| TraesCS3D01G195200.1 | Wheat | plastid | 37.85 | 39.23 |
| TraesCS7A01G229300.1 | Wheat | endoplasmic reticulum | 29.67 | 38.6 |
| CDX85942 | Canola | nucleus | 36.45 | 38.24 |
| CDY07838 | Canola | nucleus | 37.15 | 38.04 |
| CDY29184 | Canola | nucleus | 37.15 | 37.95 |
| CDY26816 | Canola | nucleus | 35.98 | 37.84 |
| Os05t0493500-00 | Rice | nucleus | 42.76 | 37.58 |
| CDY30357 | Canola | nucleus | 34.81 | 36.43 |
| CDX72551 | Canola | nucleus | 34.11 | 36.41 |
| CDX68105 | Canola | nucleus | 33.18 | 35.95 |
| CDX96631 | Canola | nucleus | 34.35 | 35.85 |
| EES02793 | Sorghum | nucleus | 38.78 | 35.85 |
| Zm00001d008221_P001 | Maize | nucleus | 39.95 | 35.7 |
| CDY33634 | Canola | nucleus | 33.88 | 35.54 |
| CDY67210 | Canola | nucleus | 33.64 | 35.47 |
| CDY06752 | Canola | nucleus | 23.6 | 35.44 |
| CDX88261 | Canola | nucleus | 35.51 | 35.35 |
| CDX87612 | Canola | nucleus | 35.51 | 35.27 |
| CDY29520 | Canola | nucleus | 33.41 | 34.88 |
| CDY22369 | Canola | nucleus | 27.8 | 33.9 |
| CDY66770 | Canola | nucleus | 28.5 | 33.7 |
| CDY06757 | Canola | nucleus, plastid | 28.5 | 33.61 |
| CDY47596 | Canola | nucleus | 28.5 | 33.61 |
| CDY17039 | Canola | nucleus | 28.27 | 33.33 |
| Os02t0627800-00 | Rice | cytosol, mitochondrion, peroxisome | 30.61 | 33.08 |
| CDY23653 | Canola | nucleus | 27.57 | 33.05 |
| HORVU3Hr1G040990.2 | Barley | nucleus, plastid | 37.38 | 32.52 |
| CDY17091 | Canola | nucleus | 26.64 | 31.84 |
| CDY17037 | Canola | nucleus, plastid | 26.87 | 31.59 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 15.42 | 31.28 |
| CDY47595 | Canola | nucleus, plastid | 27.1 | 31.27 |
| Zm00001d020033_P001 | Maize | nucleus | 39.25 | 30.88 |
| CDX88368 | Canola | plastid | 27.1 | 30.53 |
| Zm00001d020996_P001 | Maize | nucleus | 38.32 | 30.15 |
| CDY41784 | Canola | plastid | 23.13 | 29.12 |
| CDX87520 | Canola | nucleus | 25.93 | 28.76 |
| CDX92090 | Canola | mitochondrion, nucleus | 23.6 | 28.29 |
| CDY61993 | Canola | nucleus | 24.77 | 28.12 |
| CDX87087 | Canola | plastid | 27.34 | 28.06 |
| CDY02719 | Canola | plastid | 27.8 | 27.74 |
| CDX85466 | Canola | plastid | 27.34 | 27.73 |
| CDY48212 | Canola | nucleus | 23.83 | 27.06 |
| CDY53304 | Canola | plastid | 25.7 | 26.89 |
| CDX81722 | Canola | nucleus, plastid | 25.23 | 26.8 |
| CDY65994 | Canola | plastid | 27.57 | 26.64 |
| CDY25649 | Canola | plastid | 26.4 | 25.86 |
| CDX79389 | Canola | plastid | 25.93 | 25.64 |
| CDY66415 | Canola | nucleus | 25.7 | 25.35 |
| CDY36574 | Canola | mitochondrion, nucleus | 25.7 | 25.23 |
| CDX67944 | Canola | plastid | 25.23 | 25.0 |
| CDX96836 | Canola | nucleus, plastid | 25.47 | 24.77 |
| CDY39984 | Canola | plastid | 25.7 | 24.55 |
| CDX97090 | Canola | nucleus | 25.0 | 24.54 |
| CDX69768 | Canola | nucleus, plastid | 24.77 | 24.26 |
| CDX87305 | Canola | plastid | 25.7 | 23.81 |
| CDY38664 | Canola | nucleus, plastid | 25.0 | 23.52 |
| CDY37592 | Canola | mitochondrion, plastid | 25.0 | 23.41 |
| CDY33338 | Canola | nucleus | 31.54 | 23.12 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 30.84 | 21.67 |
| CDX96819 | Canola | nucleus | 31.54 | 20.93 |
| CDX83953 | Canola | nucleus | 30.84 | 20.15 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 26.64 | 11.53 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | GO:A0A078D0X5 | EnsemblPlants:CDX80988 | ProteinID:CDX80988 | ProteinID:CDX80988.1 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00134418001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0004EE23C1 | SEG:seg | : | : | : | : |
Description
BnaC03g02420D
Coordinates
chrLK031823:-:1157240..1159285
Molecular Weight (calculated)
48186.8 Da
IEP (calculated)
9.754
GRAVY (calculated)
-0.321
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRTNMPEQ VRGSVNKNGA VKNRRPLGDI GNSLVSVPVA QGGKPQPPIN RPITRSFRAQ LLLANAQKPI NCEKKPQPLA PRNKNQEAQK AVPKKNLVIK
101: LKQPQQTKHA EVVEPPKKVE KKPKEPAAKV TYSSVLSARS KAACSITTTK PKILDIDESD RDNHLAAVEY VDDMYSFYKE VEKESQPKMY MHIQTDVNEK
201: MRAILVDWLL EVHIKFELNL ETMYLTVNII DRFLSVKAVP KRELQLLGIS ALLIASKYEE IWPPQVNDLV YVTDNAYNNK QILVMEKTIL GNLEWYLTVP
301: TQYVFLVRFI KASMSDPEME NMVHFLAELG MMHYDTLKFC PSMLAASAVY TARCALKKSP AWTETLTFHT GYSESEIMEC SKLLALHHSR CGESRLRAVY
401: KKYSKVENGG VALVSPAKSL LSAAPLSA
101: LKQPQQTKHA EVVEPPKKVE KKPKEPAAKV TYSSVLSARS KAACSITTTK PKILDIDESD RDNHLAAVEY VDDMYSFYKE VEKESQPKMY MHIQTDVNEK
201: MRAILVDWLL EVHIKFELNL ETMYLTVNII DRFLSVKAVP KRELQLLGIS ALLIASKYEE IWPPQVNDLV YVTDNAYNNK QILVMEKTIL GNLEWYLTVP
301: TQYVFLVRFI KASMSDPEME NMVHFLAELG MMHYDTLKFC PSMLAASAVY TARCALKKSP AWTETLTFHT GYSESEIMEC SKLLALHHSR CGESRLRAVY
401: KKYSKVENGG VALVSPAKSL LSAAPLSA
001: MATRANVPEQ VRGAPLVDGL KIQNKNGAVK SRRALGDIGN LVSVPGVQGG KAQPPINRPI TRSFRAQLLA NAQLERKPIN GDNKVPALGP KRQPLAARNP
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
Arabidopsis Description
CYCB1-2Cyclin-B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39067]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.