Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06752 | Canola | nucleus | 75.42 | 94.74 |
| CDY47595 | Canola | nucleus, plastid | 90.22 | 87.06 |
| CDY17037 | Canola | nucleus, plastid | 87.43 | 85.99 |
| AT1G47230.2 | Thale cress | nucleus, plastid | 81.28 | 78.65 |
| CDY23653 | Canola | nucleus | 72.35 | 72.55 |
| CDY66770 | Canola | nucleus | 71.51 | 70.72 |
| CDY06757 | Canola | nucleus, plastid | 71.51 | 70.52 |
| CDY22369 | Canola | nucleus | 68.72 | 70.09 |
| CDY47596 | Canola | nucleus | 70.11 | 69.15 |
| CDY17039 | Canola | nucleus | 69.55 | 68.59 |
| OQU91386 | Sorghum | nucleus | 44.69 | 61.3 |
| VIT_18s0001g09580.t01 | Wine grape | nucleus, plastid | 61.17 | 60.0 |
| KRH52056 | Soybean | nucleus | 34.92 | 59.24 |
| PGSC0003DMT400055428 | Potato | nucleus | 59.5 | 57.88 |
| Solyc04g078310.2.1 | Tomato | nucleus | 59.78 | 57.68 |
| PGSC0003DMT400030222 | Potato | nucleus | 56.15 | 56.78 |
| Solyc12g088530.1.1 | Tomato | nucleus | 55.59 | 56.21 |
| GSMUA_Achr10P... | Banana | nucleus | 49.44 | 55.84 |
| KRH15427 | Soybean | nucleus, plastid | 56.7 | 55.77 |
| KRH05614 | Soybean | nucleus | 56.98 | 55.59 |
| PGSC0003DMT400030176 | Potato | nucleus | 55.03 | 55.34 |
| Solyc12g088520.1.1 | Tomato | nucleus | 54.75 | 55.21 |
| KRH61375 | Soybean | nucleus | 50.28 | 55.05 |
| Solyc12g088470.1.1 | Tomato | nucleus | 53.63 | 53.33 |
| Solyc12g088500.1.1 | Tomato | nucleus | 52.51 | 53.11 |
| TraesCS4D01G076900.1 | Wheat | nucleus | 53.91 | 52.16 |
| KRH61369 | Soybean | nucleus | 47.49 | 51.99 |
| KRH61371 | Soybean | nucleus | 50.56 | 51.86 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 41.34 | 51.75 |
| KRH52055 | Soybean | nucleus | 51.12 | 51.12 |
| TraesCS4B01G078300.1 | Wheat | nucleus | 52.79 | 50.94 |
| HORVU4Hr1G013320.1 | Barley | nucleus | 53.07 | 50.94 |
| TraesCS4A01G236700.2 | Wheat | plastid | 53.07 | 50.67 |
| TraesCS5B01G078200.1 | Wheat | plastid | 53.35 | 50.66 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 55.31 | 50.64 |
| TraesCS5A01G072000.1 | Wheat | plastid | 53.07 | 50.53 |
| TraesCS5D01G084700.1 | Wheat | nucleus | 53.35 | 50.53 |
| Zm00001d033365_P002 | Maize | nucleus | 52.23 | 50.27 |
| KRH61373 | Soybean | nucleus, plastid | 51.12 | 48.8 |
| Zm00001d013744_P001 | Maize | nucleus | 47.21 | 47.34 |
| Os12t0581800-01 | Rice | nucleus, plastid | 50.84 | 47.27 |
| TraesCS4D01G253200.1 | Wheat | nucleus | 32.12 | 47.13 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 47.21 | 46.94 |
| Zm00001d030849_P001 | Maize | nucleus | 51.4 | 43.5 |
| EES16237 | Sorghum | nucleus, plastid | 51.4 | 42.99 |
| HORVU5Hr1G018820.2 | Barley | nucleus, plastid | 52.79 | 41.63 |
| Zm00001d041334_P001 | Maize | nucleus, plastid | 50.0 | 40.96 |
| TraesCS4B01G254000.1 | Wheat | nucleus | 43.02 | 40.96 |
| TraesCS4D01G253900.1 | Wheat | nucleus | 43.02 | 40.53 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 23.74 | 40.28 |
| CDY48212 | Canola | nucleus | 42.18 | 40.05 |
| TraesCS4A01G050700.1 | Wheat | nucleus | 42.46 | 40.0 |
| CDY61993 | Canola | nucleus | 41.9 | 39.79 |
| CDY53304 | Canola | plastid | 44.41 | 38.88 |
| EER95303 | Sorghum | nucleus, plastid | 41.34 | 38.85 |
| TraesCS4A01G051300.1 | Wheat | nucleus | 37.15 | 38.78 |
| CDX88368 | Canola | plastid | 40.78 | 38.42 |
| TraesCS4B01G253100.1 | Wheat | nucleus | 36.59 | 38.42 |
| CDX81722 | Canola | nucleus, plastid | 43.02 | 38.21 |
| CDY41784 | Canola | plastid | 36.03 | 37.94 |
| CDX87520 | Canola | nucleus | 40.78 | 37.82 |
| CDX87087 | Canola | plastid | 43.3 | 37.17 |
| CDY31481 | Canola | nucleus | 22.35 | 36.87 |
| CDY36574 | Canola | mitochondrion, nucleus | 44.13 | 36.24 |
| CDX92090 | Canola | mitochondrion, nucleus | 36.03 | 36.13 |
| CDX96836 | Canola | nucleus, plastid | 44.13 | 35.91 |
| CDY66415 | Canola | nucleus | 43.3 | 35.71 |
| CDX79389 | Canola | plastid | 43.02 | 35.57 |
| CDX67944 | Canola | plastid | 42.46 | 35.19 |
| CDX97090 | Canola | nucleus | 42.46 | 34.86 |
| CDX85466 | Canola | plastid | 41.06 | 34.83 |
| CDX69768 | Canola | nucleus, plastid | 41.9 | 34.32 |
| CDY02719 | Canola | plastid | 40.78 | 34.03 |
| HORVU4Hr1G069310.3 | Barley | nucleus | 39.39 | 33.98 |
| CDY25649 | Canola | plastid | 40.78 | 33.41 |
| CDY38664 | Canola | nucleus, plastid | 42.46 | 33.41 |
| CDY37592 | Canola | mitochondrion, plastid | 42.46 | 33.26 |
| CDY39984 | Canola | plastid | 41.62 | 33.26 |
| CDY65994 | Canola | plastid | 41.06 | 33.18 |
| CDX87305 | Canola | plastid | 41.9 | 32.47 |
| CDY62475 | Canola | nucleus | 29.61 | 30.2 |
| Os03t0607600-00 | Rice | nucleus | 50.84 | 29.93 |
| CDY69551 | Canola | nucleus | 29.61 | 29.86 |
| Zm00001d048127_P001 | Maize | plastid | 39.11 | 29.23 |
| CDX72551 | Canola | nucleus | 32.68 | 29.18 |
| CDY67210 | Canola | nucleus | 32.4 | 28.57 |
| CDY29184 | Canola | nucleus | 33.24 | 28.4 |
| CDY30357 | Canola | nucleus | 31.84 | 27.87 |
| Os03t0208700-00 | Rice | nucleus | 31.84 | 27.87 |
| CDY26816 | Canola | nucleus | 31.56 | 27.76 |
| CDY07838 | Canola | nucleus | 32.4 | 27.75 |
| CDY11354 | Canola | plastid | 32.96 | 27.25 |
| CDX80988 | Canola | plastid | 31.84 | 26.64 |
| CDY33634 | Canola | nucleus | 29.89 | 26.23 |
| CDX96631 | Canola | nucleus | 29.61 | 25.85 |
| CDX69311 | Canola | nucleus | 30.17 | 25.78 |
| CDY29520 | Canola | nucleus | 29.33 | 25.61 |
| CDX75659 | Canola | nucleus | 30.45 | 25.47 |
| CDX85942 | Canola | nucleus | 28.77 | 25.25 |
| CDX88261 | Canola | nucleus | 29.33 | 24.42 |
| CDX87612 | Canola | nucleus | 29.33 | 24.36 |
| CDX68105 | Canola | nucleus | 25.98 | 23.54 |
| CDY14091 | Canola | plastid | 31.84 | 17.38 |
| CDY33338 | Canola | nucleus | 27.37 | 16.78 |
| CDY04980 | Canola | nucleus | 32.4 | 16.16 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 27.37 | 16.09 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 42.46 | 15.37 |
| CDX96819 | Canola | nucleus | 27.65 | 15.35 |
| CDX83953 | Canola | nucleus | 27.37 | 14.96 |
| Os03t0208800-00 | Rice | nucleus | 15.64 | 14.11 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | GO:A0A078FVY6 | UniProt:A0A078FVY6 | EnsemblPlants:CDY17091 | ProteinID:CDY17091 |
| ProteinID:CDY17091.1 | InterPro:Cyclin-A_plant | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00095114001 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF270 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0004EDAEE0 | SEG:seg | : | : |
Description
BnaC06g00240DBnaC06g00240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FVY6]
Coordinates
chrLK032070:-:367399..369197
Molecular Weight (calculated)
40830.7 Da
IEP (calculated)
8.363
GRAVY (calculated)
-0.199
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MSENTRMTRA ATKRKASTAF ATADENPVGK KRVVLGELTN VVAPNQEREI HKPKSTLTPA KKQTKNAPIP PPPGSVDPQM CGPYVADICA YLREMEGRLK
101: QRPLHDYIEK VQNDITPSMR GVLVDWLVEV AEEYKLVSDT LYLTVSYVDR FLSAKPIHRQ RLQLVGVSAM LIASKYEEIS PPKVEDFVYI TDNTFTRQDV
201: VSMEADILLA LQFELGCPTI KTFLRRFTRV AQEDFNESLL QLEFLCCYLS ELILLDYSCV KFLPSLLAAS AVFLARFIIR PKQHPWSQML EEYTKYKASD
301: LQQCVGIIHD LYLSRRGNVL EAVRNKYKQH KFKCVATMPV SPELPLAFFE DVTIRDKA
101: QRPLHDYIEK VQNDITPSMR GVLVDWLVEV AEEYKLVSDT LYLTVSYVDR FLSAKPIHRQ RLQLVGVSAM LIASKYEEIS PPKVEDFVYI TDNTFTRQDV
201: VSMEADILLA LQFELGCPTI KTFLRRFTRV AQEDFNESLL QLEFLCCYLS ELILLDYSCV KFLPSLLAAS AVFLARFIIR PKQHPWSQML EEYTKYKASD
301: LQQCVGIIHD LYLSRRGNVL EAVRNKYKQH KFKCVATMPV SPELPLAFFE DVTIRDKA
001: MAENQNCARM TRAAAKRKAS SMALDENPVS KKRVVLGELP NMSNVVAVPN QERETLKAKT SVNTSKRQMK KALMIPEASV LIESRSVDPQ MCEPFASDIC
101: AYLREMEGKP KHRPLPDYIE KVQSDLTPHM RAVLVDWLVE VAEEYKLVSD TLYLTISYVD RFLSVKPINR QKLQLVGVSA MLIASKYEEI GPPKVEDFCY
201: ITDNTFTKQE VVSMEADILL ALQFELGSPT IKTFLRRFTR VAQEDFKDSQ LQIEFLCCYL SELSMLDYTC VKYLPSLLSA SAVFLARFII RPKQHPWNQM
301: LEEYTKYKAA DLQVCVGIIH DLYLSRRGNT LEAVRNKYKQ HKYKCVATMP VSPELPLAFF EDITIRGMA
101: AYLREMEGKP KHRPLPDYIE KVQSDLTPHM RAVLVDWLVE VAEEYKLVSD TLYLTISYVD RFLSVKPINR QKLQLVGVSA MLIASKYEEI GPPKVEDFCY
201: ITDNTFTKQE VVSMEADILL ALQFELGSPT IKTFLRRFTR VAQEDFKDSQ LQIEFLCCYL SELSMLDYTC VKYLPSLLSA SAVFLARFII RPKQHPWNQM
301: LEEYTKYKAA DLQVCVGIIH DLYLSRRGNT LEAVRNKYKQ HKYKCVATMP VSPELPLAFF EDITIRGMA
Arabidopsis Description
CYCA3-4Cyclin-A3-4 [Source:UniProtKB/Swiss-Prot;Acc:Q3ECW2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.