Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87612 | Canola | nucleus | 98.14 | 97.91 |
| CDX68105 | Canola | nucleus | 81.86 | 89.11 |
| CDX85942 | Canola | nucleus | 83.72 | 88.24 |
| CDY31481 | Canola | nucleus | 40.93 | 81.11 |
| AT1G76310.3 | Thale cress | nucleus | 85.35 | 79.96 |
| CDX96631 | Canola | nucleus | 71.4 | 74.88 |
| CDY33634 | Canola | nucleus | 70.93 | 74.75 |
| CDY29520 | Canola | nucleus | 67.44 | 70.73 |
| PGSC0003DMT400075380 | Potato | nucleus | 37.44 | 67.93 |
| VIT_18s0001g14170.t01 | Wine grape | nucleus | 66.74 | 65.08 |
| Solyc04g082430.2.1 | Tomato | nucleus | 59.07 | 64.63 |
| PGSC0003DMT400025854 | Potato | nucleus | 65.12 | 63.49 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 30.47 | 60.37 |
| KRH60628 | Soybean | nucleus | 55.81 | 59.26 |
| KRH51329 | Soybean | nucleus, plastid | 56.98 | 59.04 |
| Solyc12g094600.1.1 | Tomato | nucleus | 57.91 | 58.59 |
| KXG20945 | Sorghum | nucleus | 56.05 | 56.84 |
| Os06t0726800-01 | Rice | nucleus | 55.35 | 56.8 |
| Zm00001d036360_P002 | Maize | nucleus | 55.81 | 56.6 |
| CDX72551 | Canola | nucleus | 52.09 | 55.86 |
| CDY26816 | Canola | nucleus | 51.86 | 54.79 |
| CDY67210 | Canola | nucleus | 51.63 | 54.68 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 53.26 | 54.52 |
| CDY30357 | Canola | nucleus | 51.86 | 54.52 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 53.72 | 54.48 |
| CDY29184 | Canola | nucleus | 53.02 | 54.42 |
| GSMUA_Achr11P... | Banana | nucleus | 51.63 | 54.41 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 52.79 | 54.18 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 52.79 | 54.18 |
| CDY07838 | Canola | nucleus | 52.56 | 54.07 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 52.33 | 53.7 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 52.33 | 53.57 |
| Os04t0563700-01 | Rice | mitochondrion | 51.4 | 52.62 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 48.6 | 51.6 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 48.84 | 51.34 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 49.3 | 50.36 |
| EES12664 | Sorghum | nucleus | 49.3 | 49.07 |
| Zm00001d026129_P001 | Maize | nucleus | 48.37 | 48.83 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 31.4 | 48.56 |
| Zm00001d002662_P010 | Maize | nucleus | 49.53 | 46.81 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 48.6 | 44.37 |
| CDY62475 | Canola | nucleus | 31.63 | 38.75 |
| CDY69551 | Canola | nucleus | 31.63 | 38.31 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 56.05 | 36.08 |
| CDY11354 | Canola | plastid | 36.05 | 35.8 |
| CDX80988 | Canola | plastid | 35.35 | 35.51 |
| CDY06752 | Canola | nucleus | 22.33 | 33.68 |
| CDX69311 | Canola | nucleus | 31.4 | 32.22 |
| CDX75659 | Canola | nucleus | 31.63 | 31.78 |
| CDY06757 | Canola | nucleus, plastid | 26.28 | 31.13 |
| CDX88368 | Canola | plastid | 27.21 | 30.79 |
| CDY47596 | Canola | nucleus | 25.81 | 30.58 |
| CDY17039 | Canola | nucleus | 25.81 | 30.58 |
| CDX87520 | Canola | nucleus | 27.44 | 30.57 |
| CDY66770 | Canola | nucleus | 25.58 | 30.39 |
| CDY61993 | Canola | nucleus | 26.28 | 29.97 |
| CDY22369 | Canola | nucleus | 24.42 | 29.91 |
| CDX85466 | Canola | plastid | 29.3 | 29.86 |
| CDY48212 | Canola | nucleus | 26.05 | 29.71 |
| CDY23653 | Canola | nucleus | 24.65 | 29.69 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 14.42 | 29.38 |
| CDY17091 | Canola | nucleus | 24.42 | 29.33 |
| CDY41784 | Canola | plastid | 23.02 | 29.12 |
| CDY02719 | Canola | plastid | 28.84 | 28.9 |
| CDY53304 | Canola | plastid | 27.21 | 28.61 |
| CDY17037 | Canola | nucleus, plastid | 23.95 | 28.3 |
| CDX97090 | Canola | nucleus | 28.6 | 28.21 |
| CDX81722 | Canola | nucleus, plastid | 26.28 | 28.04 |
| CDY47595 | Canola | nucleus, plastid | 23.95 | 27.76 |
| CDX87087 | Canola | plastid | 26.74 | 27.58 |
| CDY65994 | Canola | plastid | 28.14 | 27.31 |
| CDX96836 | Canola | nucleus, plastid | 27.91 | 27.27 |
| CDX69768 | Canola | nucleus, plastid | 27.67 | 27.23 |
| CDY66415 | Canola | nucleus | 27.44 | 27.19 |
| CDX92090 | Canola | mitochondrion, nucleus | 22.56 | 27.17 |
| CDX79389 | Canola | plastid | 27.21 | 27.02 |
| CDY25649 | Canola | plastid | 27.44 | 27.0 |
| CDX67944 | Canola | plastid | 26.98 | 26.85 |
| CDY36574 | Canola | mitochondrion, nucleus | 27.21 | 26.83 |
| CDY37592 | Canola | mitochondrion, plastid | 27.67 | 26.04 |
| CDY38664 | Canola | nucleus, plastid | 27.44 | 25.93 |
| CDY39984 | Canola | plastid | 26.98 | 25.89 |
| CDX87305 | Canola | plastid | 26.74 | 24.89 |
| CDY33338 | Canola | nucleus | 31.86 | 23.46 |
| CDY14091 | Canola | plastid | 35.12 | 23.02 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 32.09 | 22.66 |
| CDX96819 | Canola | nucleus | 32.56 | 21.71 |
| CDX83953 | Canola | nucleus | 32.56 | 21.37 |
| CDY04980 | Canola | nucleus | 35.12 | 21.03 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 26.74 | 11.63 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | GO:A0A078DG59 | EnsemblPlants:CDX88261 | ProteinID:CDX88261 | ProteinID:CDX88261.1 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00147752001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF350 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0004EE04C9 | SEG:seg | : | : | : | : |
Description
BnaC06g37050D
Coordinates
chrLK031855:-:46391..48889
Molecular Weight (calculated)
49084.9 Da
IEP (calculated)
4.796
GRAVY (calculated)
-0.395
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSDENRHG VIGPMNPQGG LRGGKANPGN GQTRRALSNI NKNIIGAPVY PCAVNKRPLS EKNVMCHKKI LPPPVPAHRP ITRKFAAQLA ENNPQTKKEE
101: TKSEPVDIII IDVEEVEEGD FNEPMFVQHT EAMLDEIDRM EGIEMEDSND TEEEEEEAVM DIDSCDKKNP LAVVDYIDDI YDFYKNNECR SCVPPNYMEN
201: QPDINERMRG ILVDWLIEVH YKFELMEETL YLTINLIDRF LAVHHHVARK KLQLVGVTAM LLACKYEEVS VPVVDDLILI SDKAYTRREV LDMEKLMANT
301: LQFNFCLPTP YVFMRRFLKA AQSDQKVELL SFFIVELCLV EYEMLQYTPS QLAASAIYTA QSTLKGFEEW SRTCEFYTGY TEEKLMECSR KMAGLHHEAG
401: TGKLTGVYRK YNTSKFGYAS RTEPAGFLLL
101: TKSEPVDIII IDVEEVEEGD FNEPMFVQHT EAMLDEIDRM EGIEMEDSND TEEEEEEAVM DIDSCDKKNP LAVVDYIDDI YDFYKNNECR SCVPPNYMEN
201: QPDINERMRG ILVDWLIEVH YKFELMEETL YLTINLIDRF LAVHHHVARK KLQLVGVTAM LLACKYEEVS VPVVDDLILI SDKAYTRREV LDMEKLMANT
301: LQFNFCLPTP YVFMRRFLKA AQSDQKVELL SFFIVELCLV EYEMLQYTPS QLAASAIYTA QSTLKGFEEW SRTCEFYTGY TEEKLMECSR KMAGLHHEAG
401: TGKLTGVYRK YNTSKFGYAS RTEPAGFLLL
001: MGGSDENRHG VIGPMNRQQG GLRGGKVIPT NGQTRRALSN INKNIIGAPV YPCAVKRPFT EKNGICNKKI PPVPVHRPVT RKFAAQLAEN NLQIHKEETK
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L
Arabidopsis Description
CYCB2;4CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.