Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- mitochondrion 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003563.1-P | Field mustard | plastid | 96.99 | 96.99 |
| CDX79389 | Canola | plastid | 94.91 | 94.69 |
| CDY38664 | Canola | nucleus, plastid | 83.56 | 79.34 |
| CDY37592 | Canola | mitochondrion, plastid | 83.56 | 78.99 |
| CDX87305 | Canola | plastid | 82.41 | 77.06 |
| CDY48212 | Canola | nucleus | 66.44 | 76.13 |
| CDY39984 | Canola | plastid | 78.7 | 75.89 |
| CDY61993 | Canola | nucleus | 66.2 | 75.86 |
| AT1G80370.1 | Thale cress | plastid | 80.56 | 75.49 |
| CDY36574 | Canola | mitochondrion, nucleus | 69.68 | 69.04 |
| CDY66415 | Canola | nucleus | 69.21 | 68.89 |
| CDY53304 | Canola | plastid | 64.58 | 68.22 |
| CDX81722 | Canola | nucleus, plastid | 62.96 | 67.49 |
| CDX96836 | Canola | nucleus, plastid | 68.29 | 67.05 |
| GSMUA_Achr1P14000_001 | Banana | nucleus, plasma membrane, plastid | 35.88 | 62.75 |
| VIT_09s0002g05240.t01 | Wine grape | nucleus | 56.71 | 50.0 |
| KRH47513 | Soybean | nucleus | 53.94 | 48.95 |
| CDY06752 | Canola | nucleus | 32.18 | 48.77 |
| KRH44391 | Soybean | nucleus | 51.39 | 47.13 |
| CDX87087 | Canola | plastid | 45.14 | 46.76 |
| PGSC0003DMT400006576 | Potato | nucleus | 49.54 | 46.22 |
| Solyc03g120440.1.1 | Tomato | nucleus, plastid | 48.84 | 46.07 |
| CDX97090 | Canola | nucleus | 45.6 | 45.18 |
| OQU77084 | Sorghum | nucleus | 50.69 | 44.88 |
| CDY22369 | Canola | nucleus | 36.11 | 44.44 |
| CDX69768 | Canola | nucleus, plastid | 44.91 | 44.39 |
| Os12t0502300-01 | Rice | nucleus, plastid | 50.0 | 44.08 |
| CDY17091 | Canola | nucleus | 35.19 | 42.46 |
| CDY17037 | Canola | nucleus, plastid | 35.65 | 42.31 |
| TraesCS5D01G121100.2 | Wheat | plastid | 49.31 | 41.93 |
| Zm00001d014756_P006 | Maize | nucleus, plastid | 50.46 | 41.84 |
| TraesCS5B01G114300.2 | Wheat | plastid | 49.07 | 41.81 |
| TraesCS5A01G108500.2 | Wheat | plastid | 48.84 | 41.54 |
| TraesCSU01G054300.1 | Wheat | nucleus | 48.15 | 41.52 |
| TraesCS3A01G523600.1 | Wheat | plastid | 48.61 | 41.42 |
| CDY47595 | Canola | nucleus, plastid | 35.42 | 41.24 |
| TraesCS3D01G529100.1 | Wheat | plastid | 48.15 | 41.19 |
| HORVU3Hr1G114440.21 | Barley | nucleus, plastid | 48.15 | 41.03 |
| KXG23504 | Sorghum | mitochondrion, nucleus | 45.83 | 40.99 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 19.91 | 40.76 |
| GSMUA_Achr3P25340_001 | Banana | nucleus | 50.93 | 40.59 |
| CDX88368 | Canola | plastid | 35.65 | 40.53 |
| CDY23653 | Canola | nucleus | 33.1 | 40.06 |
| CDY66770 | Canola | nucleus | 33.56 | 40.06 |
| Zm00001d023732_P002 | Maize | mitochondrion, nucleus, plastid | 44.68 | 39.79 |
| CDY06757 | Canola | nucleus, plastid | 33.33 | 39.67 |
| CDY17039 | Canola | nucleus | 33.33 | 39.67 |
| CDY47596 | Canola | nucleus | 33.33 | 39.67 |
| CDX87520 | Canola | nucleus | 35.42 | 39.64 |
| CDX85466 | Canola | plastid | 38.66 | 39.57 |
| CDY41784 | Canola | plastid | 30.32 | 38.53 |
| CDY02719 | Canola | plastid | 38.19 | 38.46 |
| CDY31481 | Canola | nucleus | 18.98 | 37.79 |
| CDY65994 | Canola | plastid | 36.81 | 35.89 |
| CDX92090 | Canola | mitochondrion, nucleus | 29.4 | 35.57 |
| CDY25649 | Canola | plastid | 35.88 | 35.47 |
| CDX72551 | Canola | nucleus | 27.31 | 29.43 |
| CDY67210 | Canola | nucleus | 27.08 | 28.82 |
| CDY62475 | Canola | nucleus | 23.15 | 28.49 |
| CDY69551 | Canola | nucleus | 23.38 | 28.45 |
| CDX85942 | Canola | nucleus | 26.85 | 28.43 |
| CDY33634 | Canola | nucleus | 26.85 | 28.43 |
| CDY30357 | Canola | nucleus | 26.85 | 28.36 |
| CDX96631 | Canola | nucleus | 26.85 | 28.29 |
| CDY29184 | Canola | nucleus | 27.08 | 27.92 |
| CDY26816 | Canola | nucleus | 26.16 | 27.76 |
| CDY29520 | Canola | nucleus | 26.16 | 27.56 |
| CDY07838 | Canola | nucleus | 26.62 | 27.51 |
| CDX88261 | Canola | nucleus | 26.85 | 26.98 |
| CDX87612 | Canola | nucleus | 26.85 | 26.91 |
| CDX68105 | Canola | nucleus | 24.07 | 26.33 |
| CDX69311 | Canola | nucleus | 25.23 | 26.01 |
| CDX80988 | Canola | plastid | 25.0 | 25.23 |
| CDX75659 | Canola | nucleus | 25.0 | 25.23 |
| CDY11354 | Canola | plastid | 25.23 | 25.17 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 46.06 | 20.12 |
| CDY33338 | Canola | nucleus | 26.16 | 19.35 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 25.93 | 18.39 |
| CDX96819 | Canola | nucleus | 25.23 | 16.9 |
| CDY14091 | Canola | plastid | 25.0 | 16.46 |
| CDX83953 | Canola | nucleus | 24.77 | 16.34 |
| CDY04980 | Canola | nucleus | 25.23 | 15.18 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | GO:A0A078BVY0 | EnsemblPlants:CDX67944 | ProteinID:CDX67944 | ProteinID:CDX67944.1 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00099155001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF346 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0004EE87EA |
| SEG:seg | : | : | : | : | : |
Description
BnaA07g19840D
Coordinates
chrLK031787:+:3032641..3034707
Molecular Weight (calculated)
48753.5 Da
IEP (calculated)
9.036
GRAVY (calculated)
-0.284
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNEKAVSGN TIPLHPRPIT RALARASSNL TTSSELAAAT TLINNQGRVL RANSKRTASD DKNANAPKRR AVLNDITNVT CENKIQIKKG RASSSRVTNA
101: KVQVVCTGTN EASSCSFIEK PSSQLPPRPP GRSTSTVERS CVGGSSTVAS IPKFIDIDSD VKDHLLCSLY APEIHYNMRV AELKRRPSPD FMERTQRDVT
201: KTMRGILVDW LVEVSEEYTL VPDTLYLTVY LIDWFLHGNY IERQRLQLLG VTCMLIASKY EEIYAPRIEE FCFITDNTYT RDQVLEMESQ VLKHFSFQIY
301: TPTSKTFLRR FLRAAQASHV MPSVEMEFLA NYLTELTLVE CEFLKFLPSV IAASAVFLAK WTMNQSNNPW NATLEHYTSY KASDLKACVQ ALQELQLNTK
401: GCPLNSIRMK YKQDKFKSVA VFTSPELPNR LF
101: KVQVVCTGTN EASSCSFIEK PSSQLPPRPP GRSTSTVERS CVGGSSTVAS IPKFIDIDSD VKDHLLCSLY APEIHYNMRV AELKRRPSPD FMERTQRDVT
201: KTMRGILVDW LVEVSEEYTL VPDTLYLTVY LIDWFLHGNY IERQRLQLLG VTCMLIASKY EEIYAPRIEE FCFITDNTYT RDQVLEMESQ VLKHFSFQIY
301: TPTSKTFLRR FLRAAQASHV MPSVEMEFLA NYLTELTLVE CEFLKFLPSV IAASAVFLAK WTMNQSNNPW NATLEHYTSY KASDLKACVQ ALQELQLNTK
401: GCPLNSIRMK YKQDKFKSVA VFTSPELPNR LF
001: MGKENAVSGN SIPIHGRPVT RALASALRAS SKLITSSEVA ATTQNQGRVL RAKSKRTALD EKKANAPKKR AVLKDITNVT CENSYTSCFS VAVENIKQIK
101: KGRQSSSSSK VASSSATSQV TDAKVEVVSN SAGASLSVFT DTSLGTNETS YSIIAKPSSR SPPRPFGTVE RSCGGASSPK FVDIDSDDKD PLLCSLYAPD
201: IYYNLRVAEL KRRPFPDFME KTQRDVTETM RGILVDWLVE VSEEYTLVPD TLYLTVYLID WFLHGNYVER QRLQLLGITC MLIASKYEEI HAPRIEEFCF
301: ITDNTYTRDQ VLEMESQVLK HFSFQIYTPT SKTFLRRFLR AAQVSFPNQS LEMEFLANYL TELTLMDYPF LKFLPSIIAA SAVFLAKWTL NQSSHPWNPT
401: LEHYTTYKAS DLKASVHALQ DLQLNTKGCS LNSIRMKYRQ DKFKSVAVFS SGELPDKLFI S
101: KGRQSSSSSK VASSSATSQV TDAKVEVVSN SAGASLSVFT DTSLGTNETS YSIIAKPSSR SPPRPFGTVE RSCGGASSPK FVDIDSDDKD PLLCSLYAPD
201: IYYNLRVAEL KRRPFPDFME KTQRDVTETM RGILVDWLVE VSEEYTLVPD TLYLTVYLID WFLHGNYVER QRLQLLGITC MLIASKYEEI HAPRIEEFCF
301: ITDNTYTRDQ VLEMESQVLK HFSFQIYTPT SKTFLRRFLR AAQVSFPNQS LEMEFLANYL TELTLMDYPF LKFLPSIIAA SAVFLAKWTL NQSSHPWNPT
401: LEHYTTYKAS DLKASVHALQ DLQLNTKGCS LNSIRMKYRQ DKFKSVAVFS SGELPDKLFI S
Arabidopsis Description
CYCA2-4Cyclin-A2-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C968]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.