Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDX67944 | nucleus |
| CDX68497 | |
| CDX68573 | nucleus |
| CDX69407 | |
| CDX69832 | nucleus |
| CDX70730 | |
| CDX70734 | |
| CDX72453 | nucleus |
| CDX72643 | nucleus |
| CDX75405 | nucleus |
| CDX76265 | nucleus |
| CDX78722 | |
| CDX79389 | nucleus |
| CDX81722 | nucleus |
| CDX83047 | |
| CDX83112 | nucleus |
| CDX85477 | |
| CDX87018 | |
| CDX87305 | nucleus |
| CDX90892 | nucleus |
| CDX96836 | nucleus |
| CDX97009 | nucleus |
| CDY02095 | nucleus |
| CDY02737 | |
| CDY05870 | |
| CDY11608 | |
| CDY16965 | |
| CDY21951 | nucleus |
| CDY22116 | nucleus |
| CDY22369 | nucleus |
| CDY23022 | nucleus |
| CDY29570 | nucleus |
| CDY36574 | nucleus |
| CDY37592 | nucleus |
| CDY38664 | nucleus |
| CDY38800 | |
| CDY39984 | nucleus |
| CDY48212 | nucleus |
| CDY49278 | nucleus |
| CDY53304 | nucleus |
| CDY57741 | nucleus |
| CDY59943 | |
| CDY61993 | nucleus |
| CDY66197 | |
| CDY66415 | nucleus |
| CDY67142 | |
| CDY67496 | |
| CDY69253 | |
| CDY69708 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039199.1-P | Field mustard | mitochondrion, nucleus, plastid | 96.05 | 85.88 |
| CDY63966 | Canola | mitochondrion, nucleus, plastid | 90.79 | 81.18 |
| AT2G23430.1 | Thale cress | mitochondrion, nucleus | 67.11 | 53.4 |
Protein Annotations
| MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | GO:A0A078I5I3 | UniProt:A0A078I5I3 | InterPro:CDI | EnsemblPlants:CDY46075 |
| ProteinID:CDY46075 | ProteinID:CDY46075.1 | GO:GO:0003674 | GO:GO:0004861 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0007050 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0071901 | EnsemblPlantsGene:GSBRNA2T00083227001 |
| PFAM:PF02234 | PIRSF:PIRSF017811 | PANTHER:PTHR10265 | PANTHER:PTHR10265:SF30 | UniParc:UPI0004EEF81D | SEG:seg |
Description
BnaA09g41990DBnaA09g41990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5I3]
Coordinates
chrLK032649:+:111080..112404
Molecular Weight (calculated)
17505.1 Da
IEP (calculated)
4.893
GRAVY (calculated)
-1.089
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLRSRRIVY RSEKASSSSS SCCASNNNRV IDLEEERDGE TETSSCRRSS KRKLFENLRE KESMENSQQI VAGFDSAVKE SSDCCCSRKA SLSTTEEKGK
101: STAEQPPTAV EIEDFFVEAE KQLHDNFKKK YNFDFEEEKP LEGRYEWVKL SE
101: STAEQPPTAV EIEDFFVEAE KQLHDNFKKK YNFDFEEEKP LEGRYEWVKL SE
001: MVRKYRKAKG IVEAGVSSTY MQLRSRRIVY VRSEKSSSVS VVGDNGVSSS CSGSNEYKKK ELIHLEEEDK DGDTETSTYR RGTKRKLFEN LREEEKEELS
101: KSMENYSSEF ESAVKESLDC CCSGRKTMEE TVTAEEEEKA KLMTEMPTES EIEDFFVEAE KQLKEKFKKK YNFDFEKEKP LEGRYEWVKL E
101: KSMENYSSEF ESAVKESLDC CCSGRKTMEE TVTAEEEEKA KLMTEMPTES EIEDFFVEAE KQLKEKFKKK YNFDFEKEKP LEGRYEWVKL E
Arabidopsis Description
KRP1Cyclin-dependent kinase inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q67Y93]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.