Factsheet for Bra039199.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, mitochondrion

Predictor Summary:

plastid 3
nucleus 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000822.1-P	nucleus
Bra003563.1-P	nucleus
Bra006382.1-P
Bra007901.1-P
Bra008477.1-P	nucleus
Bra008580.1-P
Bra009031.1-P	nucleus
Bra011501.1-P	nucleus
Bra012909.1-P	nucleus
Bra016654.1-P	nucleus
Bra017629.1-P	nucleus
Bra017840.1-P	nucleus
Bra018036.1-P
Bra023593.1-P
Bra026120.1-P	nucleus
Bra026756.1-P	nucleus
Bra029917.1-P
Bra029992.1-P	nucleus
Bra031463.1-P	nucleus
Bra033658.1-P	nucleus
Bra034198.1-P	nucleus
Bra034612.1-P	nucleus
Bra035186.1-P	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23430.1	Bra016654.1-P	AT1G15570.1	20407024
AT2G23430.1	Bra026120.1-P	AT1G15570.1	20407024
AT2G23430.1	Bra026756.1-P	AT1G15570.1	20407024
AT2G23430.1	Bra007901.1-P	AT1G70210.1	12569402
AT2G23430.1	Bra000822.1-P	AT1G80370.1	20407024
AT2G23430.1	Bra003563.1-P	AT1G80370.1	20407024
AT2G23430.1	Bra008477.1-P	AT1G80370.1	20407024
AT2G23430.1	Bra031463.1-P	AT1G80370.1	20407024
AT2G23430.1	Bra035186.1-P	AT1G80370.1	20407024
AT2G23430.1	Bra018036.1-P	AT3G48750.1	10758489
AT2G23430.1	Bra029917.1-P	AT3G48750.1	10758489
AT2G23430.1	Bra018036.1-P	AT3G48750.1	11449057
AT2G23430.1	Bra029917.1-P	AT3G48750.1	11449057
AT2G23430.1	Bra018036.1-P	AT3G48750.1	12569402
AT2G23430.1	Bra029917.1-P	AT3G48750.1	12569402
AT2G23430.1	Bra018036.1-P	AT3G48750.1	16766674
AT2G23430.1	Bra029917.1-P	AT3G48750.1	16766674
AT2G23430.1	Bra018036.1-P	AT3G48750.1	20706207
AT2G23430.1	Bra029917.1-P	AT3G48750.1	20706207
AT2G23430.1	Bra018036.1-P	AT3G48750.1	9753775
AT2G23430.1	Bra029917.1-P	AT3G48750.1	9753775
AT2G23430.1	Bra012909.1-P	AT3G50070.1	20407024
AT2G23430.1	Bra029992.1-P	AT3G50070.1	20407024
AT2G23430.1	Bra034198.1-P	AT4G03270.1	20407024
AT2G23430.1	Bra011501.1-P	AT4G34160.1	12569402
AT2G23430.1	Bra017629.1-P	AT4G34160.1	12569402
AT2G23430.1	Bra034612.1-P	AT4G34160.1	12569402
AT2G23430.1	Bra011501.1-P	AT4G34160.1	16766674
AT2G23430.1	Bra017629.1-P	AT4G34160.1	16766674
AT2G23430.1	Bra034612.1-P	AT4G34160.1	16766674
AT2G23430.1	Bra011501.1-P	AT4G34160.1	20407024
AT2G23430.1	Bra017629.1-P	AT4G34160.1	20407024
AT2G23430.1	Bra034612.1-P	AT4G34160.1	20407024
AT2G23430.1	Bra017840.1-P	AT4G37630.1	20407024
AT2G23430.1	Bra009031.1-P	AT5G10440.1	20407024
AT2G23430.1	Bra006382.1-P	AT5G17020.1	16766674
AT2G23430.1	Bra008580.1-P	AT5G17020.1	16766674
AT2G23430.1	Bra023593.1-P	AT5G17020.1	16766674
AT2G23430.1	Bra033658.1-P	AT5G43080.1	20407024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46075	Canola	nucleus	85.88	96.05
CDY63966	Canola	mitochondrion, nucleus, plastid	91.18	91.18
AT2G23430.1	Thale cress	mitochondrion, nucleus	70.0	62.3

Protein Annotations

MapMan:13.1.1.3.1	Gene3D:4.10.365.10	EnsemblPlantsGene:Bra039199	EnsemblPlants:Bra039199.1	EnsemblPlants:Bra039199.1-P	InterPro:CDI
GO:GO:0003674	GO:GO:0004861	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006259	GO:GO:0006464	GO:GO:0007049	GO:GO:0007050	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009719	GO:GO:0009737
GO:GO:0009791	GO:GO:0009987	GO:GO:0010311	GO:GO:0019538	GO:GO:0030234	GO:GO:0045736
GO:GO:0045740	GO:GO:0048366	GO:GO:0048367	GO:GO:0048527	UniProt:M4FDM8	PFAM:PF02234
PIRSF:PIRSF017811	PANTHER:PTHR10265	PANTHER:PTHR10265:SF30	UniParc:UPI0002542E73	SEG:seg	:

Description

AT2G23430 (E=7e-044) ICK1, KRP1 | ICK1; cyclin-dependent protein kinase inhibitor

Coordinates

chrA09:+:31562117..31563081

Molecular Weight (calculated)

19418.5 Da

IEP (calculated)

7.686

GRAVY (calculated)

-1.040

Length

170 amino acids

Sequence
(BLAST)

001: MVRKCRKTKG TVGASSTYMQ LRSRRIVYRS EKASSSSSSC CASNNNGVID LEEERDGETE TSSCRRSSKR KLFENLREKE SMENSQQIVA GFDSAVKESS
101: DCCCSRRTSL STTEEKGKSA TEQPPTAVEI EDFFVEAEKQ LHDNFKKKYN FDFEKEKPLE GRYEWVKLSE

Best Arabidopsis Sequence Match ( AT2G23430.1 )
(BLAST)

001: MVRKYRKAKG IVEAGVSSTY MQLRSRRIVY VRSEKSSSVS VVGDNGVSSS CSGSNEYKKK ELIHLEEEDK DGDTETSTYR RGTKRKLFEN LREEEKEELS
101: KSMENYSSEF ESAVKESLDC CCSGRKTMEE TVTAEEEEKA KLMTEMPTES EIEDFFVEAE KQLKEKFKKK YNFDFEKEKP LEGRYEWVKL E

Arabidopsis Description

KRP1Cyclin-dependent kinase inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q67Y93]
SUBAcon: [nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.