Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040792.1-P | Field mustard | nucleus, plastid | 96.98 | 96.98 |
| CDY47595 | Canola | nucleus, plastid | 96.15 | 94.34 |
| CDY06752 | Canola | nucleus | 71.43 | 91.23 |
| CDY17091 | Canola | nucleus | 85.99 | 87.43 |
| AT1G47230.2 | Thale cress | nucleus, plastid | 80.77 | 79.46 |
| CDY23653 | Canola | nucleus | 71.98 | 73.39 |
| CDY66770 | Canola | nucleus | 70.88 | 71.27 |
| CDY06757 | Canola | nucleus, plastid | 70.6 | 70.8 |
| CDY47596 | Canola | nucleus | 69.78 | 69.97 |
| CDY22369 | Canola | nucleus | 67.03 | 69.52 |
| CDY17039 | Canola | nucleus | 69.23 | 69.42 |
| VIT_18s0001g09580.t01 | Wine grape | nucleus, plastid | 60.99 | 60.82 |
| OQU91386 | Sorghum | nucleus | 43.41 | 60.54 |
| KRH52056 | Soybean | nucleus | 34.34 | 59.24 |
| PGSC0003DMT400055428 | Potato | nucleus | 58.79 | 58.15 |
| Solyc04g078310.2.1 | Tomato | nucleus | 58.24 | 57.14 |
| Solyc12g088530.1.1 | Tomato | nucleus | 54.67 | 56.21 |
| GSMUA_Achr10P... | Banana | nucleus | 48.9 | 56.15 |
| KRH15427 | Soybean | nucleus, plastid | 55.22 | 55.22 |
| PGSC0003DMT400030222 | Potato | nucleus | 53.57 | 55.08 |
| KRH61375 | Soybean | nucleus | 49.45 | 55.05 |
| KRH05614 | Soybean | nucleus | 55.22 | 54.77 |
| PGSC0003DMT400030176 | Potato | nucleus | 53.02 | 54.21 |
| Solyc12g088520.1.1 | Tomato | nucleus | 52.75 | 54.08 |
| KRH61369 | Soybean | nucleus | 47.8 | 53.21 |
| KRH61371 | Soybean | nucleus | 50.55 | 52.72 |
| TraesCS4D01G076900.1 | Wheat | nucleus | 53.3 | 52.43 |
| Solyc12g088470.1.1 | Tomato | nucleus | 51.65 | 52.22 |
| TraesCS4B01G078300.1 | Wheat | nucleus | 52.75 | 51.75 |
| HORVU4Hr1G013320.1 | Barley | nucleus | 53.02 | 51.74 |
| Solyc12g088500.1.1 | Tomato | nucleus | 50.27 | 51.69 |
| KRH52055 | Soybean | nucleus | 50.55 | 51.4 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 54.95 | 51.15 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 40.11 | 51.05 |
| TraesCS4A01G236700.2 | Wheat | plastid | 52.47 | 50.93 |
| TraesCS5B01G078200.1 | Wheat | plastid | 52.47 | 50.66 |
| Zm00001d033365_P002 | Maize | nucleus | 51.65 | 50.54 |
| TraesCS5A01G072000.1 | Wheat | plastid | 52.2 | 50.53 |
| TraesCS5D01G084700.1 | Wheat | nucleus | 52.47 | 50.53 |
| KRH61373 | Soybean | nucleus, plastid | 50.27 | 48.8 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 47.25 | 47.78 |
| Os12t0581800-01 | Rice | nucleus, plastid | 49.73 | 47.01 |
| Zm00001d013744_P001 | Maize | nucleus | 45.88 | 46.78 |
| TraesCS4D01G253200.1 | Wheat | nucleus | 31.04 | 46.31 |
| Zm00001d030849_P001 | Maize | nucleus | 50.55 | 43.5 |
| EES16237 | Sorghum | nucleus, plastid | 50.55 | 42.99 |
| HORVU5Hr1G018820.2 | Barley | nucleus, plastid | 51.92 | 41.63 |
| Zm00001d041334_P001 | Maize | nucleus, plastid | 49.73 | 41.42 |
| CDY48212 | Canola | nucleus | 42.58 | 41.11 |
| TraesCS4B01G254000.1 | Wheat | nucleus | 42.03 | 40.69 |
| CDY61993 | Canola | nucleus | 42.03 | 40.58 |
| TraesCS4D01G253900.1 | Wheat | nucleus | 42.03 | 40.26 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 22.8 | 39.34 |
| EER95303 | Sorghum | nucleus, plastid | 40.93 | 39.11 |
| TraesCS4A01G050700.1 | Wheat | nucleus | 40.66 | 38.95 |
| CDY53304 | Canola | plastid | 43.68 | 38.88 |
| CDY41784 | Canola | plastid | 35.99 | 38.53 |
| TraesCS4A01G051300.1 | Wheat | nucleus | 36.26 | 38.48 |
| TraesCS4B01G253100.1 | Wheat | nucleus | 35.99 | 38.42 |
| CDX81722 | Canola | nucleus, plastid | 42.31 | 38.21 |
| CDX88368 | Canola | plastid | 39.84 | 38.16 |
| CDX87087 | Canola | plastid | 43.13 | 37.65 |
| CDX87520 | Canola | nucleus | 39.56 | 37.31 |
| CDY36574 | Canola | mitochondrion, nucleus | 44.51 | 37.16 |
| CDY31481 | Canola | nucleus | 21.98 | 36.87 |
| CDY66415 | Canola | nucleus | 43.68 | 36.64 |
| CDX96836 | Canola | nucleus, plastid | 43.68 | 36.14 |
| CDX79389 | Canola | plastid | 42.58 | 35.8 |
| CDX67944 | Canola | plastid | 42.31 | 35.65 |
| CDX97090 | Canola | nucleus | 42.58 | 35.55 |
| CDX92090 | Canola | mitochondrion, nucleus | 34.62 | 35.29 |
| CDX85466 | Canola | plastid | 40.38 | 34.83 |
| CDX69768 | Canola | nucleus, plastid | 41.76 | 34.78 |
| CDY02719 | Canola | plastid | 40.11 | 34.03 |
| CDY39984 | Canola | plastid | 41.48 | 33.71 |
| CDY38664 | Canola | nucleus, plastid | 42.03 | 33.63 |
| CDY37592 | Canola | mitochondrion, plastid | 42.03 | 33.48 |
| CDY25649 | Canola | plastid | 40.11 | 33.41 |
| HORVU4Hr1G069310.3 | Barley | nucleus | 37.91 | 33.25 |
| CDY65994 | Canola | plastid | 40.38 | 33.18 |
| CDX87305 | Canola | plastid | 41.76 | 32.9 |
| CDY62475 | Canola | nucleus | 29.95 | 31.05 |
| CDY69551 | Canola | nucleus | 29.95 | 30.7 |
| Os03t0607600-00 | Rice | nucleus | 50.0 | 29.93 |
| Zm00001d048127_P001 | Maize | plastid | 38.19 | 29.02 |
| CDY29184 | Canola | nucleus | 33.24 | 28.88 |
| CDX72551 | Canola | nucleus | 31.59 | 28.68 |
| CDY07838 | Canola | nucleus | 32.42 | 28.23 |
| CDY67210 | Canola | nucleus | 31.32 | 28.08 |
| CDY30357 | Canola | nucleus | 31.32 | 27.87 |
| CDY26816 | Canola | nucleus | 31.04 | 27.76 |
| CDY11354 | Canola | plastid | 32.69 | 27.48 |
| Os03t0208700-00 | Rice | nucleus | 30.49 | 27.14 |
| CDX80988 | Canola | plastid | 31.59 | 26.87 |
| CDX69311 | Canola | nucleus | 29.67 | 25.78 |
| CDY33634 | Canola | nucleus | 28.85 | 25.74 |
| CDY29520 | Canola | nucleus | 28.85 | 25.61 |
| CDX85942 | Canola | nucleus | 28.57 | 25.49 |
| CDX75659 | Canola | nucleus | 29.95 | 25.47 |
| CDX96631 | Canola | nucleus | 28.57 | 25.37 |
| CDX88261 | Canola | nucleus | 28.3 | 23.95 |
| CDX87612 | Canola | nucleus | 28.3 | 23.9 |
| CDX68105 | Canola | nucleus | 25.27 | 23.29 |
| CDY14091 | Canola | plastid | 31.59 | 17.53 |
| CDY33338 | Canola | nucleus | 26.37 | 16.44 |
| CDY04980 | Canola | nucleus | 32.14 | 16.3 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 42.86 | 15.77 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 25.82 | 15.44 |
| CDX96819 | Canola | nucleus | 26.65 | 15.04 |
| CDX83953 | Canola | nucleus | 26.65 | 14.81 |
| Os03t0208800-00 | Rice | nucleus | 15.93 | 14.61 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | GO:A0A078FWF6 | UniProt:A0A078FWF6 | EnsemblPlants:CDY17037 | ProteinID:CDY17037 |
| ProteinID:CDY17037.1 | InterPro:Cyclin-A_plant | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00095008001 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF270 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0004EE0E79 | SEG:seg | : | : |
Description
BnaA08g04010DBnaA08g04010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWF6]
Coordinates
chrLK032069:-:415509..417201
Molecular Weight (calculated)
41717.6 Da
IEP (calculated)
8.519
GRAVY (calculated)
-0.322
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MAENQNSTRM TRAAAKRKAS VTDENPVSKK RVVLGELPNN SNVPAPLIPL QERETQKPKS TLFAPKKQPK NPPLPQTVDF ESGSSDPRMC GPYVADICAY
101: LREMERKLKQ RPLHDYIEKV QSDLTPSMRG VLMDWLVEVA EEYKLVSDTL YLTVSYVDRF LSAKPINRQR LQLVGVSAML IASKYEEISP PKVEDFVYIT
201: DNTFTRQDVV SMEADILVAL QFELGCPTIK TFLRRFTRVA QEDFNEPLLQ IECLCCYLSE LSLLDYSCVK FLPSMLAASA VFLARFIIRP KQRPWNQMLE
301: EYTKYKASDL QQPVGIIHDL YLSRRGNSLE AVRNKYKQHK FKCVATMPVS PELPQAFFED VTIR
101: LREMERKLKQ RPLHDYIEKV QSDLTPSMRG VLMDWLVEVA EEYKLVSDTL YLTVSYVDRF LSAKPINRQR LQLVGVSAML IASKYEEISP PKVEDFVYIT
201: DNTFTRQDVV SMEADILVAL QFELGCPTIK TFLRRFTRVA QEDFNEPLLQ IECLCCYLSE LSLLDYSCVK FLPSMLAASA VFLARFIIRP KQRPWNQMLE
301: EYTKYKASDL QQPVGIIHDL YLSRRGNSLE AVRNKYKQHK FKCVATMPVS PELPQAFFED VTIR
001: MAENQNCARM TRAAAKRKAS SMALDENPVS KKRVVLGELP NMSNVVAVPN QERETLKAKT SVNTSKRQMK KALMIPEASV LIESRSVDPQ MCEPFASDIC
101: AYLREMEGKP KHRPLPDYIE KVQSDLTPHM RAVLVDWLVE VAEEYKLVSD TLYLTISYVD RFLSVKPINR QKLQLVGVSA MLIASKYEEI GPPKVEDFCY
201: ITDNTFTKQE VVSMEADILL ALQFELGSPT IKTFLRRFTR VAQEDFKDSQ LQIEFLCCYL SELSMLDYTC VKYLPSLLSA SAVFLARFII RPKQHPWNQM
301: LEEYTKYKAA DLQVCVGIIH DLYLSRRGNT LEAVRNKYKQ HKYKCVATMP VSPELPLAFF EDITIRGMA
101: AYLREMEGKP KHRPLPDYIE KVQSDLTPHM RAVLVDWLVE VAEEYKLVSD TLYLTISYVD RFLSVKPINR QKLQLVGVSA MLIASKYEEI GPPKVEDFCY
201: ITDNTFTKQE VVSMEADILL ALQFELGSPT IKTFLRRFTR VAQEDFKDSQ LQIEFLCCYL SELSMLDYTC VKYLPSLLSA SAVFLARFII RPKQHPWNQM
301: LEEYTKYKAA DLQVCVGIIH DLYLSRRGNT LEAVRNKYKQ HKYKCVATMP VSPELPLAFF EDITIRGMA
Arabidopsis Description
CYCA3-4Cyclin-A3-4 [Source:UniProtKB/Swiss-Prot;Acc:Q3ECW2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.