Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P21380_001 | Banana | nucleus | 77.41 | 71.99 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 73.18 | 71.49 |
| GSMUA_Achr10P... | Banana | nucleus | 72.94 | 68.43 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 55.06 | 58.21 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 60.47 | 56.73 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.29 | 56.04 |
| KRG95055 | Soybean | nucleus | 58.35 | 54.51 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 25.41 | 54.27 |
| PGSC0003DMT400058457 | Potato | nucleus | 53.18 | 54.07 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 58.35 | 53.68 |
| Bra028741.1-P | Field mustard | nucleus | 52.24 | 53.49 |
| Solyc01g009040.2.1 | Tomato | nucleus | 54.12 | 52.87 |
| KRH66713 | Soybean | nucleus | 56.47 | 52.86 |
| Solyc10g078330.1.1 | Tomato | nucleus | 52.0 | 52.25 |
| PGSC0003DMT400018480 | Potato | nucleus | 52.24 | 52.24 |
| Solyc10g080950.1.1 | Tomato | nucleus | 56.71 | 52.16 |
| Bra005880.1-P | Field mustard | nucleus, plastid | 50.59 | 51.93 |
| KRH66715 | Soybean | nucleus | 47.53 | 51.53 |
| PGSC0003DMT400072211 | Potato | nucleus | 56.24 | 51.51 |
| PGSC0003DMT400015245 | Potato | nucleus | 52.71 | 51.03 |
| KRH14611 | Soybean | nucleus | 52.47 | 50.8 |
| VIT_06s0009g02090.t01 | Wine grape | nucleus | 49.65 | 50.48 |
| Bra002046.1-P | Field mustard | nucleus | 46.59 | 50.38 |
| CDY11354 | Canola | plastid | 51.29 | 50.35 |
| Solyc06g073610.2.1 | Tomato | nucleus | 52.0 | 50.23 |
| CDY69551 | Canola | nucleus | 41.88 | 50.14 |
| CDX80988 | Canola | plastid | 50.35 | 50.0 |
| AT5G06150.1 | Thale cress | nucleus | 52.24 | 49.89 |
| AT2G26760.1 | Thale cress | nucleus | 45.41 | 49.87 |
| CDY62475 | Canola | nucleus | 41.18 | 49.86 |
| KRH73516 | Soybean | nucleus | 51.53 | 49.77 |
| AT3G11520.1 | Thale cress | nucleus | 48.47 | 49.76 |
| KRH66718 | Soybean | plastid | 43.29 | 49.33 |
| AT4G37490.1 | Thale cress | nucleus | 49.18 | 48.83 |
| CDX69311 | Canola | nucleus | 46.82 | 47.49 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 24.24 | 47.47 |
| CDX75659 | Canola | nucleus | 47.06 | 46.73 |
| Bra011769.1-P | Field mustard | nucleus | 47.06 | 46.73 |
| KRG95056 | Soybean | cytosol | 41.65 | 45.74 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 39.29 | 39.39 |
| GSMUA_Achr11P... | Banana | nucleus | 37.41 | 38.97 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 38.35 | 38.81 |
| CDY14091 | Canola | plastid | 52.71 | 34.15 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 22.82 | 33.92 |
| GSMUA_Achr1P14000_001 | Banana | nucleus, plasma membrane, plastid | 19.29 | 33.2 |
| GSMUA_Achr10P... | Banana | nucleus | 24.0 | 32.18 |
| CDY04980 | Canola | nucleus | 52.47 | 31.06 |
| AT1G34460.5 | Thale cress | cytosol | 36.0 | 30.72 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 27.53 | 29.92 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 24.0 | 28.33 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 39.76 | 25.3 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 28.47 | 24.2 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 28.47 | 24.1 |
| GSMUA_Achr3P25340_001 | Banana | nucleus | 28.24 | 22.14 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr4G10090_001 | EnsemblPlants:GSMUA_Achr4P10090_001 |
| EnsemblPlants:GSMUA_Achr4T10090_001 | UniProt:M0SMM6 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI00029499B1 |
| SEG:seg | : | : | : | : | : |
Description
Cyclin-B1-1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G10090_001]
Coordinates
chr4:+:7377335..7379771
Molecular Weight (calculated)
47450.7 Da
IEP (calculated)
9.510
GRAVY (calculated)
-0.152
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRPQAVVS QQQRGGVAPA GKQKNVAVAD GKNRRALGDI GNLVTVRAVE GKPEPHINRP ITRSFGAQLL AKAQAAAAVN KVEMLAVPYS LKSSLWSQIV
101: PVGRAGRKPA KKQTHSKSSR KKVPTLTSVL TARSKVACGI VDKPKELVDD IDAADAEDQL AVVDYIEDIY KFYRSAEHDG RPRGYMDSQV EINAKMRAIL
201: ADWLIEVHHK FELMPETLYL TLYIIDRYLS MDVVLRREFQ LVGVSAMLIA SKYEEIWAPQ VDDFICISNM AYTREQILGM EKGILNKLEW NLTVPTSYVF
301: LVRFLKAASC DTEMEHMVFF FSELAMMQYS MVTHRPSMVA ASAVYAARCT LRKSPLWTDT LERHTGFSEQ QLLECTEILV NCHAAAPESK LKAVYKKYSG
401: EKFGGVAILH PPATKLVQEL KAARK
101: PVGRAGRKPA KKQTHSKSSR KKVPTLTSVL TARSKVACGI VDKPKELVDD IDAADAEDQL AVVDYIEDIY KFYRSAEHDG RPRGYMDSQV EINAKMRAIL
201: ADWLIEVHHK FELMPETLYL TLYIIDRYLS MDVVLRREFQ LVGVSAMLIA SKYEEIWAPQ VDDFICISNM AYTREQILGM EKGILNKLEW NLTVPTSYVF
301: LVRFLKAASC DTEMEHMVFF FSELAMMQYS MVTHRPSMVA ASAVYAARCT LRKSPLWTDT LERHTGFSEQ QLLECTEILV NCHAAAPESK LKAVYKKYSG
401: EKFGGVAILH PPATKLVQEL KAARK
001: MATRANVPEQ VRGAPLVDGL KIQNKNGAVK SRRALGDIGN LVSVPGVQGG KAQPPINRPI TRSFRAQLLA NAQLERKPIN GDNKVPALGP KRQPLAARNP
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
Arabidopsis Description
CYCB1-2Cyclin-B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39067]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.