Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 79.49 | 79.11 |
| HORVU5Hr1G066810.2 | Barley | cytosol | 74.4 | 66.01 |
| Bra028722.1-P | Field mustard | cytosol | 62.64 | 64.48 |
| CDY14071 | Canola | cytosol | 62.64 | 64.38 |
| TraesCS6A01G111800.1 | Wheat | cytosol | 74.88 | 58.0 |
| TraesCS6D01G100700.1 | Wheat | cytosol | 74.56 | 57.76 |
| TraesCS6B01G140000.1 | Wheat | cytosol | 74.56 | 57.41 |
| TraesCS5B01G230400.1 | Wheat | cytosol | 75.2 | 57.33 |
| TraesCS5D01G235900.1 | Wheat | cytosol | 75.04 | 57.21 |
| KXG35736 | Sorghum | cytosol | 75.83 | 57.19 |
| Os09t0446200-01 | Rice | cytosol, nucleus | 75.36 | 56.36 |
| Zm00001d020664_P016 | Maize | cytosol | 75.04 | 55.46 |
| TraesCS5A01G232100.1 | Wheat | cytosol | 75.2 | 54.24 |
| HORVU6Hr1G020090.2 | Barley | plastid | 74.56 | 52.29 |
| CDX98945 | Canola | cytosol | 8.43 | 51.96 |
| VIT_08s0007g06730.t01 | Wine grape | cytosol | 70.43 | 51.87 |
| CDY04999 | Canola | cytosol | 66.3 | 51.04 |
| AT5G06680.1 | Thale cress | cytosol | 67.89 | 50.95 |
| KRG95411 | Soybean | cytosol | 67.25 | 50.24 |
| KRH67085 | Soybean | cytosol | 66.93 | 49.88 |
| CDX70079 | Canola | cytosol | 45.47 | 44.48 |
| Bra009216.1-P | Field mustard | cytosol | 45.47 | 44.48 |
| Solyc09g009140.2.1 | Tomato | nucleus | 64.55 | 43.42 |
| PGSC0003DMT400007029 | Potato | nucleus | 64.23 | 43.21 |
| GSMUA_Achr5P24280_001 | Banana | cytosol | 18.28 | 16.24 |
| GSMUA_Achr9P31020_001 | Banana | extracellular, vacuole | 19.08 | 15.92 |
Protein Annotations
| MapMan:20.1.2.1.3 | InterPro:GCP | GO:GO:0000226 | GO:GO:0000922 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005815 |
| GO:GO:0005856 | GO:GO:0005874 | GO:GO:0007020 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0043015 | EnsemblPlantsGene:GSMUA_Achr8G22770_001 | EnsemblPlants:GSMUA_Achr8P22770_001 | EnsemblPlants:GSMUA_Achr8T22770_001 | UniProt:M0TST0 | PFAM:PF04130 |
| PANTHER:PTHR19302 | PANTHER:PTHR19302:SF14 | UniParc:UPI000295FF45 | SEG:seg | : | : |
Description
Putative Gamma-tubulin complex component 3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G22770_001]
Coordinates
chr8:+:27333381..27337930
Molecular Weight (calculated)
71824.4 Da
IEP (calculated)
7.148
GRAVY (calculated)
-0.090
Length
629 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDPKTRDLV KELVLRLVSP VDSPSSAAEE IALQKYADLV MDETEVSESA LVRDILFVCQ GINGRYVRFD KASDCYDLPE SLKLPRSMRT MVLPGNYLTL
101: RRLAVWLAEP TVKMRLMAVL VDGCRGLRGG AMAGAIHGRA QHGDPLVQEF MGRLLRRVCS PLFEMVRSWV SEGELEDTFA EFFIQSQTVK AESLWQEGYQ
201: IQSAMLPSFI SPALAQRILR TGKSINFLRV CCEDNGWADA AAKAAADVGT TTRRGGIVYG ETHALEGLVI EAAKRIDRHL MDVIHRRYRF KDHCLAIKRY
301: LLLGQGDFVQ YLMDVVGPEL SEPANTISSF QLAGLLETAI RASNSQYDDR DILDRLKVKM MDHGDGDRGW DVFSLEYDAR VPLDTVFTAS VMKKYLKIFN
401: FLWKLKRVEH ALIGVWKMMK PNSIISCIFT KEGVAVKTQF VSVLRRCQVL WNEMNHFVTN FQYYIMFEVL EVSWSQFSEE MNAAKDLDDL LAAHEKYLNS
501: IVEKSLLGER SQGLIRILFV LFDLILRLRS HAERSFEHIF ELQVRGRSKS RIKMMGAGPW FVGDRKAMMQ LAGEFLGRMG EDLDKIAKEY SASLDDFISQ
601: LPIQQHVDLK FLLFRLDFTE YYSRLVPSK
101: RRLAVWLAEP TVKMRLMAVL VDGCRGLRGG AMAGAIHGRA QHGDPLVQEF MGRLLRRVCS PLFEMVRSWV SEGELEDTFA EFFIQSQTVK AESLWQEGYQ
201: IQSAMLPSFI SPALAQRILR TGKSINFLRV CCEDNGWADA AAKAAADVGT TTRRGGIVYG ETHALEGLVI EAAKRIDRHL MDVIHRRYRF KDHCLAIKRY
301: LLLGQGDFVQ YLMDVVGPEL SEPANTISSF QLAGLLETAI RASNSQYDDR DILDRLKVKM MDHGDGDRGW DVFSLEYDAR VPLDTVFTAS VMKKYLKIFN
401: FLWKLKRVEH ALIGVWKMMK PNSIISCIFT KEGVAVKTQF VSVLRRCQVL WNEMNHFVTN FQYYIMFEVL EVSWSQFSEE MNAAKDLDDL LAAHEKYLNS
501: IVEKSLLGER SQGLIRILFV LFDLILRLRS HAERSFEHIF ELQVRGRSKS RIKMMGAGPW FVGDRKAMMQ LAGEFLGRMG EDLDKIAKEY SASLDDFISQ
601: LPIQQHVDLK FLLFRLDFTE YYSRLVPSK
001: MEDDDQQKAA DLVQELVLRL VSQNPQTPNL DPNSPAFLKT LRYAFRILSS RLTPSVLPDA TAIAESLKRR LATQGKSSDA LAFADLYTKF ASKTGPGSVN
101: NKWALVYLLK IVSDDRKSAI NGLDSSVLLP NLGIGDTGNG VLSRGEAKKK DWSNGVLLVS KDPENLRDIA FREYAILVKE ENEVTEEVLV RDVLYASQGI
201: DGKYVKFNSE IDGYAVQESV KVPRATRIMV RMLSELGWLF RKVKTFITES MDRFPAEDVG TVGQAFCAAL QDELSDYYKL LAVLEAQAMN PIPLVSESAS
301: SNNYLSLRRL SVWFAEPMVK MRLMAVLVDK CKVLRGGAMA GAIHLHAQHG DPLVHDFMMS LLRCVCSPLF EMVRSWVLEG ELEDTFGEFF VVGQPVKVDL
401: LWREGYKLHP AMLPSFISPS LAQRILRTGK SINFLRVCCD DHGWADAASE AAAASGTTTR RGGLGYGETD ALEHLVTEAA KRIDKHLLDV LYKRYKFKEH
501: CLAIKRYLLL GQGDFVQYLM DIVGPKLSEP ANNISSFELA GFLEAAIRAS NAQYDDRDML DRLRVKMMPH GSGDRGWDVF SLEYEARVPL DTVFTESVLS
601: KYLRVFNFLW KLKRVEHALI GIWKTMKPNC ITSNSFVKLQ SSVKLQLLSA LRRCQVLWNE MNHFVTNFQY YIMFEVLEVS WSNFSKEMEA AKDLDDLLAA
701: HEKYLNAIVG KSLLGEQSQT IRESLFVLFE LILRFRSHAD RLYEGIHELQ IRSKESGREK NKSQEPGSWI SEGRKGLTQR AGEFLQSMSQ DMDSIAKEYT
801: SSLDGFLSLL PLQQSVDLKF LFFRLDFTEF YSRLHSKG
101: NKWALVYLLK IVSDDRKSAI NGLDSSVLLP NLGIGDTGNG VLSRGEAKKK DWSNGVLLVS KDPENLRDIA FREYAILVKE ENEVTEEVLV RDVLYASQGI
201: DGKYVKFNSE IDGYAVQESV KVPRATRIMV RMLSELGWLF RKVKTFITES MDRFPAEDVG TVGQAFCAAL QDELSDYYKL LAVLEAQAMN PIPLVSESAS
301: SNNYLSLRRL SVWFAEPMVK MRLMAVLVDK CKVLRGGAMA GAIHLHAQHG DPLVHDFMMS LLRCVCSPLF EMVRSWVLEG ELEDTFGEFF VVGQPVKVDL
401: LWREGYKLHP AMLPSFISPS LAQRILRTGK SINFLRVCCD DHGWADAASE AAAASGTTTR RGGLGYGETD ALEHLVTEAA KRIDKHLLDV LYKRYKFKEH
501: CLAIKRYLLL GQGDFVQYLM DIVGPKLSEP ANNISSFELA GFLEAAIRAS NAQYDDRDML DRLRVKMMPH GSGDRGWDVF SLEYEARVPL DTVFTESVLS
601: KYLRVFNFLW KLKRVEHALI GIWKTMKPNC ITSNSFVKLQ SSVKLQLLSA LRRCQVLWNE MNHFVTNFQY YIMFEVLEVS WSNFSKEMEA AKDLDDLLAA
701: HEKYLNAIVG KSLLGEQSQT IRESLFVLFE LILRFRSHAD RLYEGIHELQ IRSKESGREK NKSQEPGSWI SEGRKGLTQR AGEFLQSMSQ DMDSIAKEYT
801: SSLDGFLSLL PLQQSVDLKF LFFRLDFTEF YSRLHSKG
Arabidopsis Description
GCP3Gamma-tubulin complex component 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.