Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EER90611 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G06680.1 | EER90611 | AT1G73790.1 | 22404201 |
| AT5G06680.1 | EER90611 | AT1G73790.1 | 22427335 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020664_P016 | Maize | cytosol | 95.56 | 93.65 |
| HORVU5Hr1G066810.2 | Barley | cytosol | 77.7 | 91.4 |
| Os09t0446200-01 | Rice | cytosol, nucleus | 91.97 | 91.2 |
| TraesCS5B01G230400.1 | Wheat | cytosol | 89.57 | 90.55 |
| TraesCS5D01G235900.1 | Wheat | cytosol | 89.21 | 90.18 |
| TraesCS6B01G140000.1 | Wheat | cytosol | 87.41 | 89.23 |
| TraesCS6D01G100700.1 | Wheat | cytosol | 86.81 | 89.16 |
| TraesCS6A01G111800.1 | Wheat | cytosol | 86.57 | 88.92 |
| TraesCS5A01G232100.1 | Wheat | cytosol | 88.37 | 84.52 |
| HORVU6Hr1G020090.2 | Barley | plastid | 88.85 | 82.61 |
| GSMUA_Achr10P... | Banana | cytosol | 59.83 | 78.96 |
| GSMUA_Achr8P22770_001 | Banana | cytosol | 57.19 | 75.83 |
| CDY14071 | Canola | cytosol | 51.92 | 70.75 |
| Bra028722.1-P | Field mustard | cytosol | 51.68 | 70.54 |
| AT5G06680.1 | Thale cress | cytosol | 65.23 | 64.92 |
| VIT_08s0007g06730.t01 | Wine grape | cytosol | 65.35 | 63.82 |
| CDY04999 | Canola | cytosol | 61.75 | 63.04 |
| KRG95411 | Soybean | cytosol | 62.59 | 62.0 |
| KRH67085 | Soybean | cytosol | 62.71 | 61.97 |
| CDX70079 | Canola | cytosol | 44.36 | 57.54 |
| Bra009216.1-P | Field mustard | cytosol | 44.36 | 57.54 |
| Solyc09g009140.2.1 | Tomato | nucleus | 62.83 | 56.04 |
| PGSC0003DMT400007029 | Potato | nucleus | 62.71 | 55.94 |
| CDX98945 | Canola | cytosol | 5.88 | 48.04 |
| OQU81893 | Sorghum | cytosol | 17.03 | 20.03 |
| EES19050 | Sorghum | extracellular, vacuole | 16.31 | 18.09 |
Protein Annotations
| Gene3D:1.20.120.1900 | MapMan:20.1.2.1.3 | UniProt:A0A1B6QCT4 | InterPro:GCP | GO:GO:0000226 | GO:GO:0000922 |
| GO:GO:0000930 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005737 | GO:GO:0005815 | GO:GO:0005819 |
| GO:GO:0005856 | GO:GO:0005874 | GO:GO:0005886 | GO:GO:0005938 | GO:GO:0007020 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009624 | GO:GO:0009898 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0043015 | GO:GO:0055028 | GO:GO:0090063 | EnsemblPlants:KXG35736 | ProteinID:KXG35736 |
| ProteinID:KXG35736.1 | PFAM:PF04130 | PANTHER:PTHR19302 | PANTHER:PTHR19302:SF14 | EnsemblPlantsGene:SORBI_3002G219900 | UniParc:UPI00081AC3A7 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:61124508..61127844
Molecular Weight (calculated)
93251.0 Da
IEP (calculated)
7.101
GRAVY (calculated)
-0.156
Length
834 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDQQTQDLV KELVHRLLSA AESGGGRDTG GALRFAHRLL SSRLAPAVLP DEHALAESIK RRLAASGRPD DALAFADLHS KLSVRARPAS LWPLLYLLDS
101: LSSQRRAAAA ASCLPNLPSA APPRNATSGT APGAGGRPGS RAHGAPPGGV VLVSKDPDNI REIALREYTE LVIDETEVSE AALVRDVLYA CQGIDGRYVR
201: YDKAVDAYDL PDGVRVPRST RTLVRKLCEL GWLFRKVRGF ISDNISRSPS DAATEVGTVA QAFCSALQEE LSDYYKLLAV LESYSLNPIP TPGSDSGVSS
301: NYLSLRRLAV WLAEPAVRMR LMAVLVDGCR GLRGGAMAGA IHGHAQHGDP MFQEFMGRLL RRVCSPLFEM VRSWVLEGEL EDVFTEFFIV GQPVKAESLW
401: REGYLIQSDM LPAFISPVLA QRILRTGKSI NFLRVCCDDS GWADAAAEAA AYVGTTTSRG GLGYGETDAL EALVVEAAKR IDRHLMDVIH KRYRFKDHCL
501: AIKRYLLLGQ GDFVQYLMDV VGPELSEPAN RISSFQLAGL LETAIRASNA QYDDRDILDR IKVKMMDHGD GDRGWDVFSL EYDARVPLDT VFTASVMKMY
601: LKVFNFLWKL KRVDHSLTGV WKTMKPNCIV SSPFYKEGTS IRAQFVSVLR KCQVLFNEMN HFVTNFQYYI MFEVLEVSWA RFSDEMDAAK DLDDLLLAHD
701: KYLNSILEKA LLGERSQGLL RNLFELFDII LQFRSHADRW FERIYELQLR GRGKPKTKSK DTGSWLDGGR KAMIQLAGEL FRKMGEDLDS IAKDYTASLD
801: AFITQLPMQQ HVDLKFLLFR LDFTEYYSRV SSNK
101: LSSQRRAAAA ASCLPNLPSA APPRNATSGT APGAGGRPGS RAHGAPPGGV VLVSKDPDNI REIALREYTE LVIDETEVSE AALVRDVLYA CQGIDGRYVR
201: YDKAVDAYDL PDGVRVPRST RTLVRKLCEL GWLFRKVRGF ISDNISRSPS DAATEVGTVA QAFCSALQEE LSDYYKLLAV LESYSLNPIP TPGSDSGVSS
301: NYLSLRRLAV WLAEPAVRMR LMAVLVDGCR GLRGGAMAGA IHGHAQHGDP MFQEFMGRLL RRVCSPLFEM VRSWVLEGEL EDVFTEFFIV GQPVKAESLW
401: REGYLIQSDM LPAFISPVLA QRILRTGKSI NFLRVCCDDS GWADAAAEAA AYVGTTTSRG GLGYGETDAL EALVVEAAKR IDRHLMDVIH KRYRFKDHCL
501: AIKRYLLLGQ GDFVQYLMDV VGPELSEPAN RISSFQLAGL LETAIRASNA QYDDRDILDR IKVKMMDHGD GDRGWDVFSL EYDARVPLDT VFTASVMKMY
601: LKVFNFLWKL KRVDHSLTGV WKTMKPNCIV SSPFYKEGTS IRAQFVSVLR KCQVLFNEMN HFVTNFQYYI MFEVLEVSWA RFSDEMDAAK DLDDLLLAHD
701: KYLNSILEKA LLGERSQGLL RNLFELFDII LQFRSHADRW FERIYELQLR GRGKPKTKSK DTGSWLDGGR KAMIQLAGEL FRKMGEDLDS IAKDYTASLD
801: AFITQLPMQQ HVDLKFLLFR LDFTEYYSRV SSNK
001: MEDDDQQKAA DLVQELVLRL VSQNPQTPNL DPNSPAFLKT LRYAFRILSS RLTPSVLPDA TAIAESLKRR LATQGKSSDA LAFADLYTKF ASKTGPGSVN
101: NKWALVYLLK IVSDDRKSAI NGLDSSVLLP NLGIGDTGNG VLSRGEAKKK DWSNGVLLVS KDPENLRDIA FREYAILVKE ENEVTEEVLV RDVLYASQGI
201: DGKYVKFNSE IDGYAVQESV KVPRATRIMV RMLSELGWLF RKVKTFITES MDRFPAEDVG TVGQAFCAAL QDELSDYYKL LAVLEAQAMN PIPLVSESAS
301: SNNYLSLRRL SVWFAEPMVK MRLMAVLVDK CKVLRGGAMA GAIHLHAQHG DPLVHDFMMS LLRCVCSPLF EMVRSWVLEG ELEDTFGEFF VVGQPVKVDL
401: LWREGYKLHP AMLPSFISPS LAQRILRTGK SINFLRVCCD DHGWADAASE AAAASGTTTR RGGLGYGETD ALEHLVTEAA KRIDKHLLDV LYKRYKFKEH
501: CLAIKRYLLL GQGDFVQYLM DIVGPKLSEP ANNISSFELA GFLEAAIRAS NAQYDDRDML DRLRVKMMPH GSGDRGWDVF SLEYEARVPL DTVFTESVLS
601: KYLRVFNFLW KLKRVEHALI GIWKTMKPNC ITSNSFVKLQ SSVKLQLLSA LRRCQVLWNE MNHFVTNFQY YIMFEVLEVS WSNFSKEMEA AKDLDDLLAA
701: HEKYLNAIVG KSLLGEQSQT IRESLFVLFE LILRFRSHAD RLYEGIHELQ IRSKESGREK NKSQEPGSWI SEGRKGLTQR AGEFLQSMSQ DMDSIAKEYT
801: SSLDGFLSLL PLQQSVDLKF LFFRLDFTEF YSRLHSKG
101: NKWALVYLLK IVSDDRKSAI NGLDSSVLLP NLGIGDTGNG VLSRGEAKKK DWSNGVLLVS KDPENLRDIA FREYAILVKE ENEVTEEVLV RDVLYASQGI
201: DGKYVKFNSE IDGYAVQESV KVPRATRIMV RMLSELGWLF RKVKTFITES MDRFPAEDVG TVGQAFCAAL QDELSDYYKL LAVLEAQAMN PIPLVSESAS
301: SNNYLSLRRL SVWFAEPMVK MRLMAVLVDK CKVLRGGAMA GAIHLHAQHG DPLVHDFMMS LLRCVCSPLF EMVRSWVLEG ELEDTFGEFF VVGQPVKVDL
401: LWREGYKLHP AMLPSFISPS LAQRILRTGK SINFLRVCCD DHGWADAASE AAAASGTTTR RGGLGYGETD ALEHLVTEAA KRIDKHLLDV LYKRYKFKEH
501: CLAIKRYLLL GQGDFVQYLM DIVGPKLSEP ANNISSFELA GFLEAAIRAS NAQYDDRDML DRLRVKMMPH GSGDRGWDVF SLEYEARVPL DTVFTESVLS
601: KYLRVFNFLW KLKRVEHALI GIWKTMKPNC ITSNSFVKLQ SSVKLQLLSA LRRCQVLWNE MNHFVTNFQY YIMFEVLEVS WSNFSKEMEA AKDLDDLLAA
701: HEKYLNAIVG KSLLGEQSQT IRESLFVLFE LILRFRSHAD RLYEGIHELQ IRSKESGREK NKSQEPGSWI SEGRKGLTQR AGEFLQSMSQ DMDSIAKEYT
801: SSLDGFLSLL PLQQSVDLKF LFFRLDFTEF YSRLHSKG
Arabidopsis Description
GCP3Gamma-tubulin complex component 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.