Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G022100.2 | Barley | extracellular, vacuole | 86.84 | 87.3 |
| TraesCS1B01G123000.1 | Wheat | extracellular, vacuole | 86.7 | 87.17 |
| TraesCS1A01G095200.1 | Wheat | extracellular, vacuole | 86.57 | 87.03 |
| TraesCS1D01G103700.1 | Wheat | extracellular, vacuole | 86.04 | 86.5 |
| Os05t0154500-01 | Rice | extracellular, vacuole | 85.51 | 85.28 |
| Zm00001d037593_P004 | Maize | plasma membrane | 89.63 | 80.53 |
| GSMUA_Achr9P31020_001 | Banana | extracellular, vacuole | 73.27 | 73.08 |
| PGSC0003DMT400081381 | Potato | cytosol, nucleus, plastid | 30.72 | 71.96 |
| VIT_07s0005g00610.t01 | Wine grape | vacuole | 69.41 | 70.26 |
| KRH69283 | Soybean | plasma membrane | 66.22 | 67.94 |
| KRH31863 | Soybean | endoplasmic reticulum | 65.82 | 67.62 |
| AT3G53760.1 | Thale cress | vacuole | 65.69 | 66.31 |
| CDX78203 | Canola | extracellular, vacuole | 65.43 | 66.13 |
| CDX73526 | Canola | extracellular, vacuole | 65.29 | 65.99 |
| Solyc09g075190.2.1 | Tomato | extracellular, plasma membrane | 65.29 | 65.55 |
| KRH16759 | Soybean | mitochondrion, nucleus | 14.76 | 63.79 |
| Bra007026.1-P | Field mustard | golgi, nucleus, plasma membrane | 62.5 | 47.0 |
| OQU81893 | Sorghum | cytosol | 17.29 | 18.34 |
| KXG35736 | Sorghum | cytosol | 18.09 | 16.31 |
Protein Annotations
| Gene3D:1.20.120.1900 | MapMan:20.1.2.1.4 | EntrezGene:8076003 | UniProt:C5Z0H7 | EnsemblPlants:EES19050 | ProteinID:EES19050 |
| ProteinID:EES19050.1 | InterPro:GCP | GO:GO:0000003 | GO:GO:0000226 | GO:GO:0000922 | GO:GO:0000923 |
| GO:GO:0000930 | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005200 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005815 | GO:GO:0005819 |
| GO:GO:0005856 | GO:GO:0005874 | GO:GO:0007020 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009506 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009624 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0031122 |
| GO:GO:0040007 | GO:GO:0043015 | GO:GO:0043622 | GO:GO:0051011 | GO:GO:0051321 | GO:GO:0051415 |
| GO:GO:0090307 | PFAM:PF04130 | PANTHER:PTHR19302 | PANTHER:PTHR19302:SF27 | EnsemblPlantsGene:SORBI_3009G049200 | unigene:Sbi.18569 |
| SignalP:SignalP-noTM | UniParc:UPI0001A88C8A | RefSeq:XP_002440620.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr9:-:4857236..4866318
Molecular Weight (calculated)
85723.5 Da
IEP (calculated)
7.728
GRAVY (calculated)
-0.357
Length
752 amino acids
Sequence
(BLAST)
(BLAST)
001: MLHELLLALL GFTGDFVLDA SPPRRRAASQ EAGGDGDGDG DGEVGPAFRL APDLTFLQPS ERTAIERLIS LGFYYRELNR FATESRDLSW IQSSVDVSSP
101: HSDKTQKGKV RKGSVYRRAI ANGITEILSV YRSAVLQVEQ NLLSDPLPIL ATVTHGLNKF EVLLPPLYEL VMEIEQKDIK GGQLLNLLHK RCHCGVPELQ
201: SCIQRLLWHG HQVMFNQLTS WMVYGILQDQ YSEFFIRRQD DRDGENESSQ RDVSDKFKQK LAKDTSLASW HTGFHVSLDM LPEYIHMRVA ESILFAGKAI
301: RVLRNPSPGA TLQEPVNQSQ NSKGSHGMQS FVGGSGAPKE LPSFSNISAE ELLPQTEADK IDVMLKELKH SSEFHKRPFE SAVGSIRTIA ANHLWQLVVV
401: RADLNGHLKA LKDYFLLAKG DFFQCFLEES RQLMRLPPRQ STAEADLMIP FQLAALKTIG EEDKYFTRVS LRMLSYGMKS STSQKDLQKP NASELSSQGK
501: ATSEIALDGW DSIALEYSVD WPLQLFFTPD VLSKYRKVFQ YLIRLKRTQM ELEKSWAAVM HKDHADFSEY CKDRKNNSAT QLRRQRSKPL WRVREHMAFL
601: IRNLQFYIQV DVIESQWNVL QSHVQDSHDF TELVSFHQEY LSALISQSFL DIGSVSRILD SIMKLCLQFC WSIEQYETRP NISEIDHITE EFNKKSNSLY
701: TILRSSRLAG SQRAPFLRQF LMRLNFNSFF ETTARGVMNS GRLRPSTAGA QL
101: HSDKTQKGKV RKGSVYRRAI ANGITEILSV YRSAVLQVEQ NLLSDPLPIL ATVTHGLNKF EVLLPPLYEL VMEIEQKDIK GGQLLNLLHK RCHCGVPELQ
201: SCIQRLLWHG HQVMFNQLTS WMVYGILQDQ YSEFFIRRQD DRDGENESSQ RDVSDKFKQK LAKDTSLASW HTGFHVSLDM LPEYIHMRVA ESILFAGKAI
301: RVLRNPSPGA TLQEPVNQSQ NSKGSHGMQS FVGGSGAPKE LPSFSNISAE ELLPQTEADK IDVMLKELKH SSEFHKRPFE SAVGSIRTIA ANHLWQLVVV
401: RADLNGHLKA LKDYFLLAKG DFFQCFLEES RQLMRLPPRQ STAEADLMIP FQLAALKTIG EEDKYFTRVS LRMLSYGMKS STSQKDLQKP NASELSSQGK
501: ATSEIALDGW DSIALEYSVD WPLQLFFTPD VLSKYRKVFQ YLIRLKRTQM ELEKSWAAVM HKDHADFSEY CKDRKNNSAT QLRRQRSKPL WRVREHMAFL
601: IRNLQFYIQV DVIESQWNVL QSHVQDSHDF TELVSFHQEY LSALISQSFL DIGSVSRILD SIMKLCLQFC WSIEQYETRP NISEIDHITE EFNKKSNSLY
701: TILRSSRLAG SQRAPFLRQF LMRLNFNSFF ETTARGVMNS GRLRPSTAGA QL
001: MLHELLLALL GFTGDLIVDE REQRKTLGLA FNSDSPLSDE CTFKLAPDIS FIEPSERDLI ERLIKLGFYY RELDRFAKKS RNLSWIRSVT SVHPLERADE
101: LSKQSREKKP SVYRRAIANG IGEILSVYRS AVLHIEQKLL AETTPILATV TEGLNKFFVL FPPLYEVILE IERDDIRGGQ LLNVLNKRCH CGVPELRTCL
201: QRLLWNGHQV MYNQLAAWMV YGILQDPHGE FFIKRQDDGD LDHRSSQEEV SEKLARTSVH ETSLTDWHSG FHISLDMLPD YIPMRLGESI LFAGKAIRVL
301: RNPSPAFQFQ KDKSFQQTMR GSQRIRGFMH SDFPETETEL DADLTGGELL PQSEADKIEA MLKDLKESSE FHKRSFECTV DSVRAIAASH LWQLVVVRAD
401: LNGHLKALKD YFLLEKGDFF QCFLEESRQL MRLPPRQSTG ESDLMVPFQL AATKTIAEED KYFSRVSLRM PSFGVTVRSS QADMVRSKVS LTGKANLTSD
501: TSVDGWDAIA LEYSVDWPMQ LFFTQEVLSK YLKVFQYLIR LKRTQMELEK SWASVMHQDH IESAQHRKDG LNGSTSQQRR QGIRPMWRVR EHMAFLIRNL
601: QFYIQVDVIE SQWKVLQTHI HDSQDFTELV GFHQEYLSAL ISQSFLDIGS VSRILDSIMK LCLQFCWNIE NQESNPNTSE LENIAEEFNK KSNSLYTILR
701: SSKLAGSQRA PFLRRFLLRL NFNSFYEATA RGVLNVVRQR PALPL
101: LSKQSREKKP SVYRRAIANG IGEILSVYRS AVLHIEQKLL AETTPILATV TEGLNKFFVL FPPLYEVILE IERDDIRGGQ LLNVLNKRCH CGVPELRTCL
201: QRLLWNGHQV MYNQLAAWMV YGILQDPHGE FFIKRQDDGD LDHRSSQEEV SEKLARTSVH ETSLTDWHSG FHISLDMLPD YIPMRLGESI LFAGKAIRVL
301: RNPSPAFQFQ KDKSFQQTMR GSQRIRGFMH SDFPETETEL DADLTGGELL PQSEADKIEA MLKDLKESSE FHKRSFECTV DSVRAIAASH LWQLVVVRAD
401: LNGHLKALKD YFLLEKGDFF QCFLEESRQL MRLPPRQSTG ESDLMVPFQL AATKTIAEED KYFSRVSLRM PSFGVTVRSS QADMVRSKVS LTGKANLTSD
501: TSVDGWDAIA LEYSVDWPMQ LFFTQEVLSK YLKVFQYLIR LKRTQMELEK SWASVMHQDH IESAQHRKDG LNGSTSQQRR QGIRPMWRVR EHMAFLIRNL
601: QFYIQVDVIE SQWKVLQTHI HDSQDFTELV GFHQEYLSAL ISQSFLDIGS VSRILDSIMK LCLQFCWNIE NQESNPNTSE LENIAEEFNK KSNSLYTILR
701: SSKLAGSQRA PFLRRFLLRL NFNSFYEATA RGVLNVVRQR PALPL
Arabidopsis Description
GCP4Gamma-tubulin complex component 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M350]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.