Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- peroxisome 1
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31863 | Soybean | endoplasmic reticulum | 96.45 | 96.58 |
| PGSC0003DMT400081381 | Potato | cytosol, nucleus, plastid | 34.65 | 79.13 |
| VIT_07s0005g00610.t01 | Wine grape | vacuole | 76.94 | 75.91 |
| KRH16759 | Soybean | mitochondrion, nucleus | 17.6 | 74.14 |
| Solyc09g075190.2.1 | Tomato | extracellular, plasma membrane | 74.35 | 72.76 |
| CDX78203 | Canola | extracellular, vacuole | 73.53 | 72.45 |
| AT3G53760.1 | Thale cress | vacuole | 73.53 | 72.35 |
| CDX73526 | Canola | extracellular, vacuole | 73.12 | 72.04 |
| GSMUA_Achr9P31020_001 | Banana | extracellular, vacuole | 69.44 | 67.51 |
| EES19050 | Sorghum | extracellular, vacuole | 67.94 | 66.22 |
| TraesCS1A01G095200.1 | Wheat | extracellular, vacuole | 66.58 | 65.24 |
| Os05t0154500-01 | Rice | extracellular, vacuole | 66.98 | 65.12 |
| HORVU1Hr1G022100.2 | Barley | extracellular, vacuole | 66.44 | 65.11 |
| TraesCS1D01G103700.1 | Wheat | extracellular, vacuole | 66.44 | 65.11 |
| TraesCS1B01G123000.1 | Wheat | extracellular, vacuole | 66.17 | 64.84 |
| Zm00001d037593_P004 | Maize | plasma membrane | 63.44 | 55.56 |
| Bra007026.1-P | Field mustard | golgi, nucleus, plasma membrane | 69.58 | 51.0 |
| KRG89851 | Soybean | cytosol | 13.37 | 21.21 |
| KRH66204 | Soybean | cytosol, nucleus, peroxisome | 18.28 | 20.18 |
| KRH07351 | Soybean | cytosol | 17.74 | 19.58 |
| KRG89853 | Soybean | cytosol, extracellular, nucleus | 3.68 | 15.88 |
| KRG95411 | Soybean | cytosol | 18.01 | 15.68 |
| KRH67085 | Soybean | cytosol | 17.87 | 15.52 |
Protein Annotations
| Gene3D:1.20.120.1900 | EntrezGene:100786441 | MapMan:20.1.2.1.4 | EMBL:ACUP02000699 | InterPro:GCP | EnsemblPlantsGene:GLYMA_02G017400 |
| GO:GO:0000003 | GO:GO:0000226 | GO:GO:0000922 | GO:GO:0000923 | GO:GO:0000930 | GO:GO:0003674 |
| GO:GO:0005198 | GO:GO:0005200 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005815 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0007020 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0031122 | GO:GO:0043015 |
| GO:GO:0051011 | GO:GO:0051321 | GO:GO:0051415 | GO:GO:0090307 | UniProt:I1JBK8 | EnsemblPlants:KRH69283 |
| ProteinID:KRH69283 | ProteinID:KRH69283.1 | PFAM:PF04130 | PANTHER:PTHR19302 | PANTHER:PTHR19302:SF27 | UniParc:UPI0002337027 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:1540693..1549470
Molecular Weight (calculated)
84387.7 Da
IEP (calculated)
6.663
GRAVY (calculated)
-0.212
Length
733 amino acids
Sequence
(BLAST)
(BLAST)
001: MLHELLLALL GYTGDLIIDR RDHLTADTPI SYECTFKLAP DISFIDPSDR ELIERIIVLG FYYREMERFS GKCRDLSWIR SANANPLEKK EKGSVYRRAL
101: ANGIVEILSV YRSAVLHIEQ KLLSENMPIL ATVTQGLNKF LCLLPPLYEL ILEIEHDDIR GGQLLNLLHK RCHCGVPELQ TCMQRLLWHG HQVMYNQLAS
201: WIVYGILQDQ YGEFFIRRQE DRDVENSSSH PDISEKLACM STDDASLTDW HLGFHISLDM LPEYIPMRVA ESILFAGKAV QVLRNPSPSF QSGDAVHPQM
301: PKSFQKIHGL AGRFHFQREP AIHTGMGEDL LPQSEADKIE AMLLNLKESS EFHKRSFECA VDSVQAVAAS HLWQLVVVRA DLNGHLKALK DYFLLAKGDF
401: FQCFLEESRQ LMRLPPRQST AEADLMVPFQ LAALKTIGEE DKYFSKVSLR MPSFGITVKP SLLDLPKPTS SVDGSSGASL SNALSEMSVD GWDGIALEYS
501: VDWPLHLFFT QEVLSKYLRI FQYLLRLKRT QMELEKLWAS VMHQYHSDFP KHRNDQEKCS EAQQKRQRFR PMWRVREHMA FLVRNLQFYI QVDVIESQWN
601: ILQSHIQESH DFTELVGFHQ EYLSALISQT FLDIGSVSRI LDSIMKLCLQ FCWNIENQDN CSNTSELEHI AEEFNKKSNS LYTILRSSRL AGSQRAPFLR
701: RFLLRLNLNS FFEATARGVL NVVRPRPTLP VLN
101: ANGIVEILSV YRSAVLHIEQ KLLSENMPIL ATVTQGLNKF LCLLPPLYEL ILEIEHDDIR GGQLLNLLHK RCHCGVPELQ TCMQRLLWHG HQVMYNQLAS
201: WIVYGILQDQ YGEFFIRRQE DRDVENSSSH PDISEKLACM STDDASLTDW HLGFHISLDM LPEYIPMRVA ESILFAGKAV QVLRNPSPSF QSGDAVHPQM
301: PKSFQKIHGL AGRFHFQREP AIHTGMGEDL LPQSEADKIE AMLLNLKESS EFHKRSFECA VDSVQAVAAS HLWQLVVVRA DLNGHLKALK DYFLLAKGDF
401: FQCFLEESRQ LMRLPPRQST AEADLMVPFQ LAALKTIGEE DKYFSKVSLR MPSFGITVKP SLLDLPKPTS SVDGSSGASL SNALSEMSVD GWDGIALEYS
501: VDWPLHLFFT QEVLSKYLRI FQYLLRLKRT QMELEKLWAS VMHQYHSDFP KHRNDQEKCS EAQQKRQRFR PMWRVREHMA FLVRNLQFYI QVDVIESQWN
601: ILQSHIQESH DFTELVGFHQ EYLSALISQT FLDIGSVSRI LDSIMKLCLQ FCWNIENQDN CSNTSELEHI AEEFNKKSNS LYTILRSSRL AGSQRAPFLR
701: RFLLRLNLNS FFEATARGVL NVVRPRPTLP VLN
001: MLHELLLALL GFTGDLIVDE REQRKTLGLA FNSDSPLSDE CTFKLAPDIS FIEPSERDLI ERLIKLGFYY RELDRFAKKS RNLSWIRSVT SVHPLERADE
101: LSKQSREKKP SVYRRAIANG IGEILSVYRS AVLHIEQKLL AETTPILATV TEGLNKFFVL FPPLYEVILE IERDDIRGGQ LLNVLNKRCH CGVPELRTCL
201: QRLLWNGHQV MYNQLAAWMV YGILQDPHGE FFIKRQDDGD LDHRSSQEEV SEKLARTSVH ETSLTDWHSG FHISLDMLPD YIPMRLGESI LFAGKAIRVL
301: RNPSPAFQFQ KDKSFQQTMR GSQRIRGFMH SDFPETETEL DADLTGGELL PQSEADKIEA MLKDLKESSE FHKRSFECTV DSVRAIAASH LWQLVVVRAD
401: LNGHLKALKD YFLLEKGDFF QCFLEESRQL MRLPPRQSTG ESDLMVPFQL AATKTIAEED KYFSRVSLRM PSFGVTVRSS QADMVRSKVS LTGKANLTSD
501: TSVDGWDAIA LEYSVDWPMQ LFFTQEVLSK YLKVFQYLIR LKRTQMELEK SWASVMHQDH IESAQHRKDG LNGSTSQQRR QGIRPMWRVR EHMAFLIRNL
601: QFYIQVDVIE SQWKVLQTHI HDSQDFTELV GFHQEYLSAL ISQSFLDIGS VSRILDSIMK LCLQFCWNIE NQESNPNTSE LENIAEEFNK KSNSLYTILR
701: SSKLAGSQRA PFLRRFLLRL NFNSFYEATA RGVLNVVRQR PALPL
101: LSKQSREKKP SVYRRAIANG IGEILSVYRS AVLHIEQKLL AETTPILATV TEGLNKFFVL FPPLYEVILE IERDDIRGGQ LLNVLNKRCH CGVPELRTCL
201: QRLLWNGHQV MYNQLAAWMV YGILQDPHGE FFIKRQDDGD LDHRSSQEEV SEKLARTSVH ETSLTDWHSG FHISLDMLPD YIPMRLGESI LFAGKAIRVL
301: RNPSPAFQFQ KDKSFQQTMR GSQRIRGFMH SDFPETETEL DADLTGGELL PQSEADKIEA MLKDLKESSE FHKRSFECTV DSVRAIAASH LWQLVVVRAD
401: LNGHLKALKD YFLLEKGDFF QCFLEESRQL MRLPPRQSTG ESDLMVPFQL AATKTIAEED KYFSRVSLRM PSFGVTVRSS QADMVRSKVS LTGKANLTSD
501: TSVDGWDAIA LEYSVDWPMQ LFFTQEVLSK YLKVFQYLIR LKRTQMELEK SWASVMHQDH IESAQHRKDG LNGSTSQQRR QGIRPMWRVR EHMAFLIRNL
601: QFYIQVDVIE SQWKVLQTHI HDSQDFTELV GFHQEYLSAL ISQSFLDIGS VSRILDSIMK LCLQFCWNIE NQESNPNTSE LENIAEEFNK KSNSLYTILR
701: SSKLAGSQRA PFLRRFLLRL NFNSFYEATA RGVLNVVRQR PALPL
Arabidopsis Description
GCP4Gamma-tubulin complex component 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M350]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.