CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66204	Soybean	cytosol, nucleus, peroxisome	94.88	94.88
KRG89853	Soybean	cytosol, extracellular, nucleus	23.34	91.18
KRG89851	Soybean	cytosol	62.05	89.18
CDY16926	Canola	cytosol	56.93	72.41
CDX82078	Canola	mitochondrion	12.95	72.27
VIT_14s0066g01030.t01	Wine grape	cytosol	76.36	72.22
AT5G17410.2	Thale cress	nucleus, plastid	71.99	70.4
CDX78748	Canola	nucleus	72.44	69.41
CDX70761	Canola	nucleus	70.78	69.32
Bra006406.1-P	Field mustard	nucleus	62.95	68.98
Solyc02g081460.2.1	Tomato	cytosol	71.69	67.33
PGSC0003DMT400050760	Potato	cytosol	71.54	67.19
CDY38427	Canola	cytosol	56.33	65.16
GSMUA_Achr5P24280_001	Banana	cytosol	68.67	64.41
TraesCS2B01G375700.1	Wheat	nucleus	67.32	63.05
TraesCS2A01G356400.1	Wheat	cytosol	67.32	63.05
TraesCS2D01G355300.1	Wheat	cytosol	67.17	62.91
Os04t0501700-01	Rice	nucleus	67.32	62.87
OQU81893	Sorghum	cytosol	66.42	62.2
Zm00001d025793_P001	Maize	cytosol	66.72	61.96
HORVU2Hr1G086820.13	Barley	cytosol, plastid	67.17	59.79
Bra013980.1-P	Field mustard	cytosol	43.52	53.42
KRH31863	Soybean	endoplasmic reticulum	19.58	17.76
KRH69283	Soybean	plasma membrane	19.58	17.74
KRG95411	Soybean	cytosol	21.23	16.75
KRH67085	Soybean	cytosol	20.93	16.47
KRH16759	Soybean	mitochondrion, nucleus	3.92	14.94

Protein Annotations

EntrezGene:100795585	MapMan:20.1.2.1.2	UniProt:A0A0R0FN05	EMBL:ACUP02009972	InterPro:GCP	EnsemblPlantsGene:GLYMA_16G082900
GO:GO:0000226	GO:GO:0000922	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005815	GO:GO:0005856	GO:GO:0005874
GO:GO:0007020	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0043015	EnsemblPlants:KRH07351
ProteinID:KRH07351	ProteinID:KRH07351.1	ProteinID:KRH07352.1	ProteinID:KRH07353.1	ProteinID:KRH07354.1	PFAM:PF04130
PANTHER:PTHR19302	PANTHER:PTHR19302:SF13	UniParc:UPI000233E4B4	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr16:+:9352545..9388142

Molecular Weight (calculated)

75358.1 Da

IEP (calculated)

7.110

GRAVY (calculated)

-0.113

Length

664 amino acids

Sequence
(BLAST)

001: MNQTVVTNFE KPIGCYSPSV QELIVIDDVL SSMTGIEGRY ILIKAVRGKN DDIAFLVDPS MDLALQELAK RIFPLCKSFL LISQFVESRS QFQSGLVNHA
101: FSAALRALLL DYQAMVSQLE HQFRLGRLSL QGLWFYCQPM MRSMQALSTV IQKASVNNIS GSAVLNLLQS QAKAMAGDNA VRMMLEKMTQ CASSAYMSIL
201: ERWVYEGIID DPYGEFFIAE DKSLQKESLT QDYEAKYWRQ RYSLKDGIPS FLENIAGTIL TTGKYLNVMR ECGHNVQVPP SENSKLMSFG SNHHYLECIK
301: AAYNFASGEL LNLIKEKYDL TGRLRSIKHY LLLDQGDFLV HFMDIARDEL AKKPDEVSVE KLQSLLDLAL RTTAAAADPF HEGLTCVVER CSLLRRLGTF
401: NDLEVTLRNS GDNDLEEPVS ITSLETFSLS YKVHWPLSIV LSRKALTKYQ LLFRFLFHCK HVDRQLCGAW QVHQGVRALN TSGTAISRSS LLCRSMLKFI
501: NSLLHYLTFE VIEPNWHLMY NRLQSANSID EVIQHHDFFL DKCLRECLLL LPELLKKVER LKSMCLQYAA ATQWLISSSI ELHNPEEPID DSKGLNKAKW
601: KSGQVLKSTT RNMAVTDSVL KFEKEFNTEL QSLGSILSNN SQAEPYLSHL AQWLLGVKSE KNGL

Best Arabidopsis Sequence Match ( AT5G17410.2 )
(BLAST)

001: MESMTPISCP TTPRWNQDRP FLTGRFHQET RASSKFADSK RFTLDSSSSS GVEQAIGCYD TPVQELIVID DLLSALVGIE GRYISIKRFH GKEDSIAFQV
101: DPSMDLALQE LAKRIFPLCE YYLLIDQFVE SSSQFKNGLV NHAFAAALRA LLLDYQAMVA QLEHQFRLGR LSIQGLWFYC QPMMGSMRAL AAVIQQASTK
201: QFVGSGVLNL LQSQAKAMAG DNSVRSLLEK MTECASNAYL SILERWVYEG IIDDPYGEFF IAENRSLKKE SLSQDSTAKY WSQRYSLKDT IPGFLANIAA
301: TILTTGKYLN VMRECGHNVQ VPISERSKLT IFGSNHHYLE CIKAAHEFAS IELVNLIKDK YDLVGRLRSI KHYLLLDQGD FLVHFMDIAR EELNKKVHEI
401: SVEKLQSLLD LALRTTAAAA DPRHEDLTCC VDRASLLTTL GMHKDTDSNS IEDPMSITGL ETFSLSYKVQ WPLSIVISKK ALSKYQLIFR FLFHCKHVER
501: QLCGAWQIHQ GIRSMNSKGT AILRSSLLCR SMLKFISSLL HYLTFEVLEP NWHVMHDRLQ STRSVDEVIQ HHDFFLDKCL RGCLLLLPDV LKKMEKLKSV
601: CLQYAAATQW LISSSIDINS QSHPQKTMIR DTTVTESIFN FEREFNSELQ SLGPVLSKGS QAEPYLTHLS QWILGVSKE

Arabidopsis Description

Spc97 / Spc98 family of spindle pole body (SBP) component [Source:TAIR;Acc:AT5G17410]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.