Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G356400.1 | Wheat | cytosol | 99.15 | 99.15 |
| TraesCS2B01G375700.1 | Wheat | nucleus | 98.59 | 98.59 |
| HORVU2Hr1G086820.13 | Barley | cytosol, plastid | 98.87 | 93.97 |
| Os04t0501700-01 | Rice | nucleus | 90.55 | 90.3 |
| OQU81893 | Sorghum | cytosol | 89.7 | 89.7 |
| Zm00001d025793_P001 | Maize | cytosol | 89.56 | 88.81 |
| GSMUA_Achr5P24280_001 | Banana | cytosol | 74.19 | 74.29 |
| CDX82078 | Canola | mitochondrion | 12.27 | 73.11 |
| VIT_14s0066g01030.t01 | Wine grape | cytosol | 70.24 | 70.94 |
| AT5G17410.2 | Thale cress | nucleus, plastid | 65.87 | 68.78 |
| KRG89853 | Soybean | cytosol, extracellular, nucleus | 16.22 | 67.65 |
| CDX70761 | Canola | nucleus | 64.6 | 67.55 |
| CDX78748 | Canola | nucleus | 65.73 | 67.24 |
| KRH07351 | Soybean | cytosol | 62.91 | 67.17 |
| Bra006406.1-P | Field mustard | nucleus | 57.4 | 67.16 |
| CDY16926 | Canola | cytosol | 49.37 | 67.05 |
| KRH66204 | Soybean | cytosol, nucleus, peroxisome | 62.62 | 66.87 |
| KRG89851 | Soybean | cytosol | 43.44 | 66.67 |
| PGSC0003DMT400050760 | Potato | cytosol | 66.01 | 66.2 |
| Solyc02g081460.2.1 | Tomato | cytosol | 65.87 | 66.05 |
| CDY38427 | Canola | cytosol | 50.49 | 62.37 |
| Bra013980.1-P | Field mustard | cytosol | 39.92 | 52.31 |
| TraesCS1D01G103700.1 | Wheat | extracellular, vacuole | 19.32 | 18.32 |
| TraesCS6D01G100700.1 | Wheat | cytosol | 19.89 | 17.36 |
| TraesCS5D01G235900.1 | Wheat | cytosol | 20.03 | 17.21 |
Protein Annotations
| MapMan:20.1.2.1.2 | InterPro:GCP | GO:GO:0000226 | GO:GO:0000922 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005815 | GO:GO:0005856 |
| GO:GO:0007020 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0043015 | PFAM:PF04130 |
| PANTHER:PTHR19302 | PANTHER:PTHR19302:SF13 | EnsemblPlantsGene:TraesCS2D01G355300 | EnsemblPlants:TraesCS2D01G355300.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr2D:+:457644412..457650118
Molecular Weight (calculated)
79384.1 Da
IEP (calculated)
7.906
GRAVY (calculated)
-0.053
Length
709 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAPATPRW NLERPYLTGR FHQEAKVSAA SQAPGSKPFS LDSFSRGAGG GAGSVLGSYA VSVQELLVID DLLSALVGIE GRYISIKRVR GKEGYVVFQI
101: DSSMDLALQE LTRRIFPLCE DFVLASQFVE SRSHFKTGLV NHALAAALRA FLLDYQAMVA QLEHQFRLGR LSVQGLWFFC QRMMSSLNAL AVLIEKAMSN
201: NTSGSATLNL LHSQAKAMAG DSAVRSLLEK MTDCASAAYL RMLERWVYEG VIDDPYGEFF IAENKSLQKE SLTQDYDAKY WQQRYSLKDG IPSFLNNVAA
301: TILTTGKYLN VMRECGHNVQ VSLSENSKLT SFGSNHQYLE CIKSAYDFAS GELLTLMKDK YDLIGKLRSL KRYLLLDQGD FLVHFMDIAR EELTKKPEDI
401: SVEKLQSLVD IALRSTAAAS DPSHEDLTCC VERSSLLKKL TSLKDLDCAY SSDKLAAADV DQPMTLNITG LETFCLGYKI PWPLSLVISR KALTKYQLIF
501: RLLFHCKHVS RQLCQAWQIQ QGFRSVKILG TPILRSSILC RSMLKFVNSL LHYLTFEVLE PNWHSMHGRL QTARSIDEVI QIHDFFLQKC LKECLLLLPE
601: LLMKVEKLKA LCLQYATSIQ LLIPSIEVAA AESKSKSGSS RARAKRSQDR DEQLKLASEN VVMSQSILKF ESEFNAELQS LVPTLSKSSQ AEPYLTHLAQ
701: CILGVGIDQ
101: DSSMDLALQE LTRRIFPLCE DFVLASQFVE SRSHFKTGLV NHALAAALRA FLLDYQAMVA QLEHQFRLGR LSVQGLWFFC QRMMSSLNAL AVLIEKAMSN
201: NTSGSATLNL LHSQAKAMAG DSAVRSLLEK MTDCASAAYL RMLERWVYEG VIDDPYGEFF IAENKSLQKE SLTQDYDAKY WQQRYSLKDG IPSFLNNVAA
301: TILTTGKYLN VMRECGHNVQ VSLSENSKLT SFGSNHQYLE CIKSAYDFAS GELLTLMKDK YDLIGKLRSL KRYLLLDQGD FLVHFMDIAR EELTKKPEDI
401: SVEKLQSLVD IALRSTAAAS DPSHEDLTCC VERSSLLKKL TSLKDLDCAY SSDKLAAADV DQPMTLNITG LETFCLGYKI PWPLSLVISR KALTKYQLIF
501: RLLFHCKHVS RQLCQAWQIQ QGFRSVKILG TPILRSSILC RSMLKFVNSL LHYLTFEVLE PNWHSMHGRL QTARSIDEVI QIHDFFLQKC LKECLLLLPE
601: LLMKVEKLKA LCLQYATSIQ LLIPSIEVAA AESKSKSGSS RARAKRSQDR DEQLKLASEN VVMSQSILKF ESEFNAELQS LVPTLSKSSQ AEPYLTHLAQ
701: CILGVGIDQ
001: MESMTPISCP TTPRWNQDRP FLTGRFHQET RASSKFADSK RFTLDSSSSS GVEQAIGCYD TPVQELIVID DLLSALVGIE GRYISIKRFH GKEDSIAFQV
101: DPSMDLALQE LAKRIFPLCE YYLLIDQFVE SSSQFKNGLV NHAFAAALRA LLLDYQAMVA QLEHQFRLGR LSIQGLWFYC QPMMGSMRAL AAVIQQASTK
201: QFVGSGVLNL LQSQAKAMAG DNSVRSLLEK MTECASNAYL SILERWVYEG IIDDPYGEFF IAENRSLKKE SLSQDSTAKY WSQRYSLKDT IPGFLANIAA
301: TILTTGKYLN VMRECGHNVQ VPISERSKLT IFGSNHHYLE CIKAAHEFAS IELVNLIKDK YDLVGRLRSI KHYLLLDQGD FLVHFMDIAR EELNKKVHEI
401: SVEKLQSLLD LALRTTAAAA DPRHEDLTCC VDRASLLTTL GMHKDTDSNS IEDPMSITGL ETFSLSYKVQ WPLSIVISKK ALSKYQLIFR FLFHCKHVER
501: QLCGAWQIHQ GIRSMNSKGT AILRSSLLCR SMLKFISSLL HYLTFEVLEP NWHVMHDRLQ STRSVDEVIQ HHDFFLDKCL RGCLLLLPDV LKKMEKLKSV
601: CLQYAAATQW LISSSIDINS QSHPQKTMIR DTTVTESIFN FEREFNSELQ SLGPVLSKGS QAEPYLTHLS QWILGVSKE
101: DPSMDLALQE LAKRIFPLCE YYLLIDQFVE SSSQFKNGLV NHAFAAALRA LLLDYQAMVA QLEHQFRLGR LSIQGLWFYC QPMMGSMRAL AAVIQQASTK
201: QFVGSGVLNL LQSQAKAMAG DNSVRSLLEK MTECASNAYL SILERWVYEG IIDDPYGEFF IAENRSLKKE SLSQDSTAKY WSQRYSLKDT IPGFLANIAA
301: TILTTGKYLN VMRECGHNVQ VPISERSKLT IFGSNHHYLE CIKAAHEFAS IELVNLIKDK YDLVGRLRSI KHYLLLDQGD FLVHFMDIAR EELNKKVHEI
401: SVEKLQSLLD LALRTTAAAA DPRHEDLTCC VDRASLLTTL GMHKDTDSNS IEDPMSITGL ETFSLSYKVQ WPLSIVISKK ALSKYQLIFR FLFHCKHVER
501: QLCGAWQIHQ GIRSMNSKGT AILRSSLLCR SMLKFISSLL HYLTFEVLEP NWHVMHDRLQ STRSVDEVIQ HHDFFLDKCL RGCLLLLPDV LKKMEKLKSV
601: CLQYAAATQW LISSSIDINS QSHPQKTMIR DTTVTESIFN FEREFNSELQ SLGPVLSKGS QAEPYLTHLS QWILGVSKE
Arabidopsis Description
Spc97 / Spc98 family of spindle pole body (SBP) component [Source:TAIR;Acc:AT5G17410]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.