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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU81893 Sorghum cytosol 95.66 96.47
Os04t0501700-01 Rice nucleus 89.93 90.44
TraesCS2A01G356400.1 Wheat cytosol 89.09 89.84
TraesCS2D01G355300.1 Wheat cytosol 88.81 89.56
TraesCS2B01G375700.1 Wheat nucleus 88.39 89.14
HORVU2Hr1G086820.13 Barley cytosol, plastid 88.53 84.85
GSMUA_Achr5P24280_001 Banana cytosol 73.29 74.01
CDX82078 Canola mitochondrion 12.17 73.11
VIT_14s0066g01030.t01 Wine grape cytosol 68.53 69.8
AT5G17410.2 Thale cress nucleus, plastid 65.03 68.48
CDX70761 Canola nucleus 63.5 66.96
CDX78748 Canola nucleus 64.76 66.81
KRH07351 Soybean cytosol 61.96 66.72
CDY16926 Canola cytosol 48.67 66.67
Bra006406.1-P Field mustard nucleus 56.36 66.5
KRG89853 Soybean cytosol, extracellular, nucleus 15.8 66.47
KRG89851 Soybean cytosol 42.94 66.45
KRH66204 Soybean cytosol, nucleus, peroxisome 61.54 66.27
PGSC0003DMT400050760 Potato cytosol 65.45 66.2
Solyc02g081460.2.1 Tomato cytosol 65.17 65.91
CDY38427 Canola cytosol 49.51 61.67
Bra013980.1-P Field mustard cytosol 39.44 52.13
Zm00001d020664_P016 Maize cytosol 20.28 17.04
Zm00001d037593_P004 Maize plasma membrane 17.2 14.7
Protein Annotations
Gene3D:1.20.120.1900EntrezGene:100274060MapMan:20.1.2.1.2UniProt:A0A1D6J9L1ProteinID:AQK44603.1InterPro:GCP
GO:GO:0000226GO:GO:0000922GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005815GO:GO:0005856GO:GO:0005874
GO:GO:0007020GO:GO:0008150GO:GO:0009987GO:GO:0016043GO:GO:0043015PFAM:PF04130
PANTHER:PTHR19302PANTHER:PTHR19302:SF13UniParc:UPI000844E524EnsemblPlantsGene:Zm00001d025793EnsemblPlants:Zm00001d025793_P001EnsemblPlants:Zm00001d025793_T001
SEG:seg:::::
Description
Gamma-tubulin complex component 2
Coordinates
chr10:+:129804930..129812444
Molecular Weight (calculated)
80272.3 Da
IEP (calculated)
8.082
GRAVY (calculated)
-0.041
Length
715 amino acids
Sequence
(BLAST)
001: MDPAPATPRW NLERPYLTGR FHQEAKAAAA AQGLGSKPFS LDSFSRGAGA GSVIGSYAVS VQELLVIDDL LSALVGIEGR YVSIKRVRGK EGYVVFQIDS
101: SMDLALQELT RRIFPLCEDY VLVSQFVESR SHFKNGLVNH ALAAALRAFL LDYQAMVAQL EHQFRLGRLS VQGLWFFCQR MMSSLNALAV LVEKATSNNT
201: NGSATLNLLQ SQAKAMGGDS AVRSLLEKMT EYASAAYLRM LERWVYEGVI DDPYGEFFIA ENKSLQKESL TQDYDAKYWQ QRYSLKEGIP SFLTNVAATI
301: LTTGKYLNVM RECGHNVQVS LSDNSKLMSF GSNHQYLECI KSAYDFASGE LLTLMKDKYD LIGKLRSLKR YLLLDQLLIL SVLSSLQGDF LVHFMDIARE
401: ELTKKPEEIS AEKLQSLLDI ALRSTAAASD PSHEELICCV ERSSLLKKLA TLKDLDPADK LAAADVDRSM QLSITGLETF CLSNKVQWPL SLVISRKALT
501: KYQLIFRLLF HCKHVSRQLC AAWQIQQAFR SVKILGTPIL RSSILCRSML KFVNSLLHYL TFEVLEPNWH LMHDRLQTAR SIDEVIQIHD FFLQKCLKEC
601: LLLSPELLVK VEKLKGLCLQ YATSIQILMP SIDVANSENT SKSRKSRSRI DKSQDRDQQL KLASENVVMS ESILKFEAAF NSELQSLAPT LSNSSQAEPY
701: VTHLAQCILG VRIGQ
Best Arabidopsis Sequence Match ( AT5G17410.2 )
(BLAST)
001: MESMTPISCP TTPRWNQDRP FLTGRFHQET RASSKFADSK RFTLDSSSSS GVEQAIGCYD TPVQELIVID DLLSALVGIE GRYISIKRFH GKEDSIAFQV
101: DPSMDLALQE LAKRIFPLCE YYLLIDQFVE SSSQFKNGLV NHAFAAALRA LLLDYQAMVA QLEHQFRLGR LSIQGLWFYC QPMMGSMRAL AAVIQQASTK
201: QFVGSGVLNL LQSQAKAMAG DNSVRSLLEK MTECASNAYL SILERWVYEG IIDDPYGEFF IAENRSLKKE SLSQDSTAKY WSQRYSLKDT IPGFLANIAA
301: TILTTGKYLN VMRECGHNVQ VPISERSKLT IFGSNHHYLE CIKAAHEFAS IELVNLIKDK YDLVGRLRSI KHYLLLDQGD FLVHFMDIAR EELNKKVHEI
401: SVEKLQSLLD LALRTTAAAA DPRHEDLTCC VDRASLLTTL GMHKDTDSNS IEDPMSITGL ETFSLSYKVQ WPLSIVISKK ALSKYQLIFR FLFHCKHVER
501: QLCGAWQIHQ GIRSMNSKGT AILRSSLLCR SMLKFISSLL HYLTFEVLEP NWHVMHDRLQ STRSVDEVIQ HHDFFLDKCL RGCLLLLPDV LKKMEKLKSV
601: CLQYAAATQW LISSSIDINS QSHPQKTMIR DTTVTESIFN FEREFNSELQ SLGPVLSKGS QAEPYLTHLS QWILGVSKE
Arabidopsis Description
Spc97 / Spc98 family of spindle pole body (SBP) component [Source:TAIR;Acc:AT5G17410]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.