CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07351	Soybean	cytosol	94.88	94.88
KRG89853	Soybean	cytosol, extracellular, nucleus	24.1	94.12
KRG89851	Soybean	cytosol	62.2	89.39
CDY16926	Canola	cytosol	56.78	72.22
VIT_14s0066g01030.t01	Wine grape	cytosol	75.9	71.79
CDX82078	Canola	mitochondrion	12.65	70.59
AT5G17410.2	Thale cress	nucleus, plastid	71.39	69.81
CDX78748	Canola	nucleus	72.14	69.12
CDX70761	Canola	nucleus	70.48	69.03
Bra006406.1-P	Field mustard	nucleus	62.65	68.65
Solyc02g081460.2.1	Tomato	cytosol	71.54	67.19
PGSC0003DMT400050760	Potato	cytosol	71.39	67.04
CDY38427	Canola	cytosol	56.17	64.98
GSMUA_Achr5P24280_001	Banana	cytosol	68.07	63.84
TraesCS2A01G356400.1	Wheat	cytosol	67.02	62.76
TraesCS2D01G355300.1	Wheat	cytosol	66.87	62.62
TraesCS2B01G375700.1	Wheat	nucleus	66.87	62.62
Os04t0501700-01	Rice	nucleus	66.87	62.45
OQU81893	Sorghum	cytosol	65.96	61.78
Zm00001d025793_P001	Maize	cytosol	66.27	61.54
HORVU2Hr1G086820.13	Barley	cytosol, plastid	66.72	59.38
Bra013980.1-P	Field mustard	cytosol	43.22	53.05
KRH69283	Soybean	plasma membrane	20.18	18.28
KRH31863	Soybean	endoplasmic reticulum	19.88	18.03
KRG95411	Soybean	cytosol	21.69	17.1
KRH67085	Soybean	cytosol	21.39	16.82
KRH16759	Soybean	mitochondrion, nucleus	4.07	15.52

Protein Annotations

EntrezGene:100791588	MapMan:20.1.2.1.2	EMBL:ACUP02001921	InterPro:GCP	EnsemblPlantsGene:GLYMA_03G090100	GO:GO:0000003
GO:GO:0000226	GO:GO:0000922	GO:GO:0000923	GO:GO:0003674	GO:GO:0005198	GO:GO:0005200
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005815	GO:GO:0005856	GO:GO:0005874	GO:GO:0007020	GO:GO:0007049	GO:GO:0008150
GO:GO:0008275	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0031122
GO:GO:0043015	GO:GO:0051011	GO:GO:0051321	GO:GO:0051415	GO:GO:0090307	UniProt:K7KDY0
EnsemblPlants:KRH66204	ProteinID:KRH66204	ProteinID:KRH66204.1	PFAM:PF04130	PANTHER:PTHR19302	PANTHER:PTHR19302:SF13
UniParc:UPI000295DB3A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:26758367..26768646

Molecular Weight (calculated)

74963.9 Da

IEP (calculated)

7.562

GRAVY (calculated)

-0.049

Length

664 amino acids

Sequence
(BLAST)

001: MSQTAIANFE KPIGCYSPSV QELIVIDNVL SAMVGVEGHY ILIKTVCGKS NDITFLVDPS MDLALQELAK RIFPLCKSFL LINQFVESRS QFQSGLVNHA
101: FSAALRALLL DYQAMVAQLE HQFRLGRLSL QGLWFYCQPM MRSMQGLSTV IQRASVNNIS GSAVLNLLQS QAKAMAGDNA VRMMLEKMAQ CASSAYMSIL
201: ERWVYEGVID DPYGEFFIAE DKSLQKESLT QDYEAKYWRQ RYSLKDGIPS FLANIAGTIL TTGKYLNVMR ECGHNVQVPP SENSKLMSFG SNHHYLECIK
301: AAYNFASGEL LNLIKDKYDL TGRLRSIKHY LLLDQGDFLV HFMDIARDEL AKKPDEVSVE KLQSLLDLAL RTTAAAADPF HEGLTCVVER SSLLRRLGTF
401: NDLEVTLRNS GDNDLEEPVS ITGLETFSLS YKVHWPLSIV LSSKALIKYQ LLFRFLFHCK HVDRQLCGAW QVHQGVRALN THGTAISRSS LLCRSMLKFI
501: NSLLHYLTFE VIEPNWHLMY NKLQSAKSID EVIQHHDFFL DKCLRECLLL LPELLKKVER LKSMCLQYAA ATQWLISSSI ELHNPVEPID DSKGLNKAKW
601: KSGQVLKSTT RNVAVTDSVL KFEKEFNTEL QSLGSILSSN SQAEPYLSHL AQWLLGVKNV KNGL

Best Arabidopsis Sequence Match ( AT5G17410.2 )
(BLAST)

001: MESMTPISCP TTPRWNQDRP FLTGRFHQET RASSKFADSK RFTLDSSSSS GVEQAIGCYD TPVQELIVID DLLSALVGIE GRYISIKRFH GKEDSIAFQV
101: DPSMDLALQE LAKRIFPLCE YYLLIDQFVE SSSQFKNGLV NHAFAAALRA LLLDYQAMVA QLEHQFRLGR LSIQGLWFYC QPMMGSMRAL AAVIQQASTK
201: QFVGSGVLNL LQSQAKAMAG DNSVRSLLEK MTECASNAYL SILERWVYEG IIDDPYGEFF IAENRSLKKE SLSQDSTAKY WSQRYSLKDT IPGFLANIAA
301: TILTTGKYLN VMRECGHNVQ VPISERSKLT IFGSNHHYLE CIKAAHEFAS IELVNLIKDK YDLVGRLRSI KHYLLLDQGD FLVHFMDIAR EELNKKVHEI
401: SVEKLQSLLD LALRTTAAAA DPRHEDLTCC VDRASLLTTL GMHKDTDSNS IEDPMSITGL ETFSLSYKVQ WPLSIVISKK ALSKYQLIFR FLFHCKHVER
501: QLCGAWQIHQ GIRSMNSKGT AILRSSLLCR SMLKFISSLL HYLTFEVLEP NWHVMHDRLQ STRSVDEVIQ HHDFFLDKCL RGCLLLLPDV LKKMEKLKSV
601: CLQYAAATQW LISSSIDINS QSHPQKTMIR DTTVTESIFN FEREFNSELQ SLGPVLSKGS QAEPYLTHLS QWILGVSKE

Arabidopsis Description

Spc97 / Spc98 family of spindle pole body (SBP) component [Source:TAIR;Acc:AT5G17410]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.