Factsheet for TraesCS2A01G356400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G355300.1	Wheat	cytosol	99.15	99.15
TraesCS2B01G375700.1	Wheat	nucleus	98.59	98.59
HORVU2Hr1G086820.13	Barley	cytosol, plastid	98.87	93.97
Os04t0501700-01	Rice	nucleus	90.69	90.44
OQU81893	Sorghum	cytosol	89.99	89.99
Zm00001d025793_P001	Maize	cytosol	89.84	89.09
GSMUA_Achr5P24280_001	Banana	cytosol	74.05	74.15
CDX82078	Canola	mitochondrion	12.27	73.11
VIT_14s0066g01030.t01	Wine grape	cytosol	70.1	70.8
AT5G17410.2	Thale cress	nucleus, plastid	65.87	68.78
KRG89853	Soybean	cytosol, extracellular, nucleus	16.22	67.65
CDX70761	Canola	nucleus	64.6	67.55
Bra006406.1-P	Field mustard	nucleus	57.55	67.33
KRH07351	Soybean	cytosol	63.05	67.32
CDX78748	Canola	nucleus	65.73	67.24
KRH66204	Soybean	cytosol, nucleus, peroxisome	62.76	67.02
KRG89851	Soybean	cytosol	43.58	66.88
CDY16926	Canola	cytosol	49.22	66.86
PGSC0003DMT400050760	Potato	cytosol	66.01	66.2
Solyc02g081460.2.1	Tomato	cytosol	65.87	66.05
CDY38427	Canola	cytosol	50.35	62.2
Bra013980.1-P	Field mustard	cytosol	39.77	52.13
TraesCS6A01G111800.1	Wheat	cytosol	20.87	18.23
TraesCS1A01G095200.1	Wheat	extracellular, vacuole	18.9	17.91
TraesCS5A01G232100.1	Wheat	cytosol	20.31	16.51

Protein Annotations

EnsemblPlants:TraesCS2A01G356400.1	EnsemblPlantsGene:TraesCS2A01G356400	GO:GO:0000226	GO:GO:0000922	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005815	GO:GO:0005856
GO:GO:0007020	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0043015	InterPro:GCP
PANTHER:PTHR19302	PANTHER:PTHR19302:SF13	PFAM:PF04130	SEG:seg	MapMan:20.1.2.1.2	:

Description

No Description!

Coordinates

chr2A:+:601325984..601333864

Molecular Weight (calculated)

79495.3 Da

IEP (calculated)

7.906

GRAVY (calculated)

-0.067

Length

709 amino acids

Sequence
(BLAST)

001: MDPAPATPRW NLERPYLTGR FHQEAKVYAA SQAPGSKPFS LDSFSRGAGG GAGSVLGSYA VSVQELLVID DLLSALVGIE GRYISIKRVR GKEGYVVFQI
101: DSSMDLALQE LTRRIFPLCE DFVLASQFVE SRSHFKNGLV NHALAAALRA FLLDYQAMVA QLEHQFRLGR LSVQGLWFFC QRMMSSLNAL AVLIEKAMSN
201: NTSGSATLNL LHSQAKAMAG DSAVRSLLEK MTDCASAAYL RMLERWVYEG VIDDPYGEFF IAENKSLQKE SLTQDYDAKY WQQRYSLKDG IPSFLNNVAA
301: TILTTGKYLN VMRECGHNVQ VSLSENSKLT SFGSNHQYLE CIKSAYDFAS GELLTLMKDK YDLIGKLRSL KRYLLLDQGD FLVHFMDIAR EELTKKPEDI
401: SVEKLQSLVD IALRSTAAAS DPSHEDLTCC VERSSLLKKL TTLKDLDCAY SSDKLAAADV DQPMTLNITG LETFCLGYKI PWPLSLVISR KALTKYQLIF
501: RLLFHCKHVS RQLCQAWQIQ QGFRSVKILG TPILRPSILC RSMLKFVNSL LHYLTFEVLE PNWHSMHGRL QTARSIDEVI QIHDFFLQKC LKECLLLLPE
601: LLMKVEKLKA LCLQYATSIQ LLIPSIEVAA PESKSKSGSS RARAKRSQDR DEQLKLASEN VVMSQSILKF ESEFNAELQS LAPTLSKSSQ AEPYLTHLAQ
701: CILGVGIDQ

Best Arabidopsis Sequence Match ( AT5G17410.2 )
(BLAST)

001: MESMTPISCP TTPRWNQDRP FLTGRFHQET RASSKFADSK RFTLDSSSSS GVEQAIGCYD TPVQELIVID DLLSALVGIE GRYISIKRFH GKEDSIAFQV
101: DPSMDLALQE LAKRIFPLCE YYLLIDQFVE SSSQFKNGLV NHAFAAALRA LLLDYQAMVA QLEHQFRLGR LSIQGLWFYC QPMMGSMRAL AAVIQQASTK
201: QFVGSGVLNL LQSQAKAMAG DNSVRSLLEK MTECASNAYL SILERWVYEG IIDDPYGEFF IAENRSLKKE SLSQDSTAKY WSQRYSLKDT IPGFLANIAA
301: TILTTGKYLN VMRECGHNVQ VPISERSKLT IFGSNHHYLE CIKAAHEFAS IELVNLIKDK YDLVGRLRSI KHYLLLDQGD FLVHFMDIAR EELNKKVHEI
401: SVEKLQSLLD LALRTTAAAA DPRHEDLTCC VDRASLLTTL GMHKDTDSNS IEDPMSITGL ETFSLSYKVQ WPLSIVISKK ALSKYQLIFR FLFHCKHVER
501: QLCGAWQIHQ GIRSMNSKGT AILRSSLLCR SMLKFISSLL HYLTFEVLEP NWHVMHDRLQ STRSVDEVIQ HHDFFLDKCL RGCLLLLPDV LKKMEKLKSV
601: CLQYAAATQW LISSSIDINS QSHPQKTMIR DTTVTESIFN FEREFNSELQ SLGPVLSKGS QAEPYLTHLS QWILGVSKE

Arabidopsis Description

Spc97 / Spc98 family of spindle pole body (SBP) component [Source:TAIR;Acc:AT5G17410]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.