Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66204 | Soybean | cytosol, nucleus, peroxisome | 89.39 | 62.2 |
| KRH07351 | Soybean | cytosol | 89.18 | 62.05 |
| CDY16926 | Canola | cytosol | 64.29 | 56.9 |
| CDY38427 | Canola | cytosol | 67.1 | 54.01 |
| VIT_14s0066g01030.t01 | Wine grape | cytosol | 77.49 | 51.0 |
| AT5G17410.2 | Thale cress | nucleus, plastid | 69.05 | 46.98 |
| CDX70761 | Canola | nucleus | 68.83 | 46.9 |
| Solyc02g081460.2.1 | Tomato | cytosol | 71.0 | 46.39 |
| PGSC0003DMT400050760 | Potato | cytosol | 70.56 | 46.11 |
| CDX78748 | Canola | nucleus | 69.05 | 46.03 |
| GSMUA_Achr5P24280_001 | Banana | cytosol | 68.83 | 44.92 |
| Os04t0501700-01 | Rice | nucleus | 67.1 | 43.6 |
| TraesCS2A01G356400.1 | Wheat | cytosol | 66.88 | 43.58 |
| TraesCS2D01G355300.1 | Wheat | cytosol | 66.67 | 43.44 |
| TraesCS2B01G375700.1 | Wheat | nucleus | 66.67 | 43.44 |
| Bra006406.1-P | Field mustard | nucleus | 56.49 | 43.07 |
| OQU81893 | Sorghum | cytosol | 66.02 | 43.02 |
| Zm00001d025793_P001 | Maize | cytosol | 66.45 | 42.94 |
| HORVU2Hr1G086820.13 | Barley | cytosol, plastid | 66.88 | 41.42 |
| Bra013980.1-P | Field mustard | cytosol | 43.07 | 36.78 |
| CDX82078 | Canola | mitochondrion | 6.93 | 26.89 |
| KRH16759 | Soybean | mitochondrion, nucleus | 5.84 | 15.52 |
| KRH69283 | Soybean | plasma membrane | 21.21 | 13.37 |
| KRH31863 | Soybean | endoplasmic reticulum | 21.0 | 13.25 |
| KRG95411 | Soybean | cytosol | 21.43 | 11.76 |
| KRH67085 | Soybean | cytosol | 21.21 | 11.61 |
| KRG89853 | Soybean | cytosol, extracellular, nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:20.1.2.1.2 | UniProt:A0A0R0E7B7 | EMBL:ACUP02012295 | InterPro:GCP | EnsemblPlantsGene:GLYMA_20G0512002 | GO:GO:0000226 |
| GO:GO:0000922 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005815 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0007020 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0043015 | EnsemblPlants:KRG89851 | ProteinID:KRG89851 |
| ProteinID:KRG89851.1 | PFAM:PF04130 | UniParc:UPI0006EDE243 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr20:-:11358708..11364537
Molecular Weight (calculated)
52689.3 Da
IEP (calculated)
6.912
GRAVY (calculated)
-0.213
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: WVYEGVIDDP YGEFFIAEDK SLQKESLTQD YEAKYWQQRY SLKDGIPSFL ANIAGAILTT GKYLNVMREC GHTVRAPPSE NSKLMSFGSN HHYLECIKAA
101: YNFASSELLN LIMEKYDLTG RLRSIKHYLL LDQGDFLVHF MDIARDELAK KPDEVSVEKL QSLLDLALRT TAAAADPFHE GLTCVVERSS LIRRLGTFND
201: LEVTQRNSGN NVLEEPVSIT GLETFSLSYK VHWPLSIVLS RKALTKYQLL FRFLFHCKHV DRQLCGAWQV HQGVRALNTR ETAISRSSLL CRSMLKFINS
301: LLHYLTFEVI EPNWHLMYNR LQSANSIDEV IQQHDFFLDK CLRECLLLLP ELLKKVERLK SMCLQYAAAT QWLISSSIEL HNPEEPIDES IGLNKAKGKS
401: GQVLKSTTRN VAVTDSVLKF EKEFNTELQS LGSILSSNSQ AEPYLSHLAQ WLLGVKNEKN GL
101: YNFASSELLN LIMEKYDLTG RLRSIKHYLL LDQGDFLVHF MDIARDELAK KPDEVSVEKL QSLLDLALRT TAAAADPFHE GLTCVVERSS LIRRLGTFND
201: LEVTQRNSGN NVLEEPVSIT GLETFSLSYK VHWPLSIVLS RKALTKYQLL FRFLFHCKHV DRQLCGAWQV HQGVRALNTR ETAISRSSLL CRSMLKFINS
301: LLHYLTFEVI EPNWHLMYNR LQSANSIDEV IQQHDFFLDK CLRECLLLLP ELLKKVERLK SMCLQYAAAT QWLISSSIEL HNPEEPIDES IGLNKAKGKS
401: GQVLKSTTRN VAVTDSVLKF EKEFNTELQS LGSILSSNSQ AEPYLSHLAQ WLLGVKNEKN GL
001: MESMTPISCP TTPRWNQDRP FLTGRFHQET RASSKFADSK RFTLDSSSSG VEQAIGCYDT PVQELIVIDD LLSALVGIEG RYISIKRFHG KEDSIAFQVD
101: PSMDLALQEL AKRIFPLCEY YLLIDQFVES SSQFKNGLVN HAFAAALRAL LLDYQAMVAQ LEHQFRLGRL SIQGLWFYCQ PMMGSMRALA AVIQQASTKQ
201: FVGSGVLNLL QSQAKAMAGD NSVRSLLEKM TECASNAYLS ILERWVYEGI IDDPYGEFFI AENRSLKKES LSQDSTAKYW SQRYSLKDTI PGFLANIAAT
301: ILTTGKYLNV MRECGHNVQV PISERSKLTI FGSNHHYLEC IKAAHEFASI ELVNLIKDKY DLVGRLRSIK HYLLLDQGDF LVHFMDIARE ELNKKVHEIS
401: VEKLQSLLDL ALRTTAAAAD PRHEDLTCCV DRASLLTTLG MHKDTDSNSI EDPMSITGLE TFSLSYKVQW PLSIVISKKA LSKYQLIFRF LFHCKHVERQ
501: LCGAWQIHQG IRSMNSKGTA ILRSSLLCRS MLKFISSLLH YLTFEVLEPN WHVMHDRLQS TRSVDEVIQH HDFFLDKCLR GCLLLLPDVL KKMEKLKSVC
601: LQYAAATQWL ISSSIDINSQ SHPQKTMIRD TTVTESIFNF EREFNSELQS LGPVLSKGSQ AEPYLTHLSQ WILGVSKE
101: PSMDLALQEL AKRIFPLCEY YLLIDQFVES SSQFKNGLVN HAFAAALRAL LLDYQAMVAQ LEHQFRLGRL SIQGLWFYCQ PMMGSMRALA AVIQQASTKQ
201: FVGSGVLNLL QSQAKAMAGD NSVRSLLEKM TECASNAYLS ILERWVYEGI IDDPYGEFFI AENRSLKKES LSQDSTAKYW SQRYSLKDTI PGFLANIAAT
301: ILTTGKYLNV MRECGHNVQV PISERSKLTI FGSNHHYLEC IKAAHEFASI ELVNLIKDKY DLVGRLRSIK HYLLLDQGDF LVHFMDIARE ELNKKVHEIS
401: VEKLQSLLDL ALRTTAAAAD PRHEDLTCCV DRASLLTTLG MHKDTDSNSI EDPMSITGLE TFSLSYKVQW PLSIVISKKA LSKYQLIFRF LFHCKHVERQ
501: LCGAWQIHQG IRSMNSKGTA ILRSSLLCRS MLKFISSLLH YLTFEVLEPN WHVMHDRLQS TRSVDEVIQH HDFFLDKCLR GCLLLLPDVL KKMEKLKSVC
601: LQYAAATQWL ISSSIDINSQ SHPQKTMIRD TTVTESIFNF EREFNSELQS LGPVLSKGSQ AEPYLTHLSQ WILGVSKE
Arabidopsis Description
Spc97 / Spc98 family of spindle pole body (SBP) component [Source:TAIR;Acc:AT5G17410]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.