Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- peroxisome 1
- plastid 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69283 | Soybean | plasma membrane | 96.58 | 96.45 |
| PGSC0003DMT400081381 | Potato | cytosol, nucleus, plastid | 34.84 | 79.44 |
| VIT_07s0005g00610.t01 | Wine grape | vacuole | 77.19 | 76.04 |
| KRH16759 | Soybean | mitochondrion, nucleus | 17.62 | 74.14 |
| Solyc09g075190.2.1 | Tomato | extracellular, plasma membrane | 74.59 | 72.9 |
| CDX78203 | Canola | extracellular, vacuole | 73.63 | 72.45 |
| AT3G53760.1 | Thale cress | vacuole | 73.63 | 72.35 |
| CDX73526 | Canola | extracellular, vacuole | 73.22 | 72.04 |
| GSMUA_Achr9P31020_001 | Banana | extracellular, vacuole | 69.54 | 67.51 |
| EES19050 | Sorghum | extracellular, vacuole | 67.62 | 65.82 |
| TraesCS1A01G095200.1 | Wheat | extracellular, vacuole | 66.67 | 65.24 |
| TraesCS1D01G103700.1 | Wheat | extracellular, vacuole | 66.53 | 65.11 |
| HORVU1Hr1G022100.2 | Barley | extracellular, vacuole | 66.39 | 64.97 |
| Os05t0154500-01 | Rice | extracellular, vacuole | 66.67 | 64.72 |
| TraesCS1B01G123000.1 | Wheat | extracellular, vacuole | 66.12 | 64.71 |
| Zm00001d037593_P004 | Maize | plasma membrane | 63.25 | 55.32 |
| Bra007026.1-P | Field mustard | golgi, nucleus, plasma membrane | 69.81 | 51.1 |
| KRG89851 | Soybean | cytosol | 13.25 | 21.0 |
| KRH66204 | Soybean | cytosol, nucleus, peroxisome | 18.03 | 19.88 |
| KRH07351 | Soybean | cytosol | 17.76 | 19.58 |
| KRG95411 | Soybean | cytosol | 18.03 | 15.68 |
| KRH67085 | Soybean | cytosol | 17.9 | 15.52 |
| KRG89853 | Soybean | cytosol, extracellular, nucleus | 3.55 | 15.29 |
Protein Annotations
| Gene3D:1.20.120.1900 | EntrezGene:100819794 | MapMan:20.1.2.1.4 | EMBL:ACUP02006088 | InterPro:GCP | EnsemblPlantsGene:GLYMA_10G017800 |
| GO:GO:0000003 | GO:GO:0000226 | GO:GO:0000922 | GO:GO:0000923 | GO:GO:0000930 | GO:GO:0003674 |
| GO:GO:0005198 | GO:GO:0005200 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005815 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0007020 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0031122 | GO:GO:0043015 |
| GO:GO:0051011 | GO:GO:0051321 | GO:GO:0051415 | GO:GO:0090307 | UniProt:I1L7U5 | EnsemblPlants:KRH31863 |
| ProteinID:KRH31863 | ProteinID:KRH31863.1 | PFAM:PF04130 | PANTHER:PTHR19302 | PANTHER:PTHR19302:SF27 | UniParc:UPI000233CC4E |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:1562191..1572163
Molecular Weight (calculated)
84180.5 Da
IEP (calculated)
6.719
GRAVY (calculated)
-0.215
Length
732 amino acids
Sequence
(BLAST)
(BLAST)
001: MLHELLLSLL GYTGDLIIDG RDQLTAETPI SDECTFKLAP DIPFIDPSDR ELIERIIVLG FYYREMERFS AKCRDLSWIR SANAKPLEKK EKGSVYRRAL
101: ASGIVEILSV YRSAVLHIEQ KLLSETMPIL ATVTQGLNKF LCLLPPLYEL ILEIERDDIR GGQLLNLLHK RCHCGVPELQ TCMQRLLWHG HQVMYNQLAS
201: WIVYGILQDQ YGEFFIRRQE DRDVENSSSH PDISEKLARM STDDASLTDW HLGFHISLDM LPEYIPMRVA ESILFAGKAV RVLRNPSPSF QSGDAVHPQM
301: PKSFQKIHGL AGRFHFQREP AINMGMGEDL LPQSEADKIE AMLLNLKESS EFHKRSFECA VDSVQAIAAS HLWQLVVVRA DLNGHLKALK DYFLLAKGDF
401: FQCFLEESRQ LMRLPPRQST AEADLMVPFQ LAALKTIGEE DKYFSKVSLR MPSFGITVKP SLLDLPKPTS SIDGSSGASL SNASSEVSVD GWDGIALEYS
501: VDWPLHLFFT QEVLSKYLRI FQYLLRLKRT QMELEKLWAS VMHQYHSDFP KHRNDQEKCS EAQQKRQRFR PMWRVREHMA FLVRNLQFYI QVDVIESQWN
601: ILQSHIQESH DFTELVGFHQ EYLSALISQT FLDIGSVSRI LDSIMKLCLQ FCWNIENQDN CSNTSELEHI AEEFNKKSNS LYTILRSSRL AGSQRAPFLR
701: RFLLRLNLNS FFEATAARGV LNVVRPRPTL PV
101: ASGIVEILSV YRSAVLHIEQ KLLSETMPIL ATVTQGLNKF LCLLPPLYEL ILEIERDDIR GGQLLNLLHK RCHCGVPELQ TCMQRLLWHG HQVMYNQLAS
201: WIVYGILQDQ YGEFFIRRQE DRDVENSSSH PDISEKLARM STDDASLTDW HLGFHISLDM LPEYIPMRVA ESILFAGKAV RVLRNPSPSF QSGDAVHPQM
301: PKSFQKIHGL AGRFHFQREP AINMGMGEDL LPQSEADKIE AMLLNLKESS EFHKRSFECA VDSVQAIAAS HLWQLVVVRA DLNGHLKALK DYFLLAKGDF
401: FQCFLEESRQ LMRLPPRQST AEADLMVPFQ LAALKTIGEE DKYFSKVSLR MPSFGITVKP SLLDLPKPTS SIDGSSGASL SNASSEVSVD GWDGIALEYS
501: VDWPLHLFFT QEVLSKYLRI FQYLLRLKRT QMELEKLWAS VMHQYHSDFP KHRNDQEKCS EAQQKRQRFR PMWRVREHMA FLVRNLQFYI QVDVIESQWN
601: ILQSHIQESH DFTELVGFHQ EYLSALISQT FLDIGSVSRI LDSIMKLCLQ FCWNIENQDN CSNTSELEHI AEEFNKKSNS LYTILRSSRL AGSQRAPFLR
701: RFLLRLNLNS FFEATAARGV LNVVRPRPTL PV
001: MLHELLLALL GFTGDLIVDE REQRKTLGLA FNSDSPLSDE CTFKLAPDIS FIEPSERDLI ERLIKLGFYY RELDRFAKKS RNLSWIRSVT SVHPLERADE
101: LSKQSREKKP SVYRRAIANG IGEILSVYRS AVLHIEQKLL AETTPILATV TEGLNKFFVL FPPLYEVILE IERDDIRGGQ LLNVLNKRCH CGVPELRTCL
201: QRLLWNGHQV MYNQLAAWMV YGILQDPHGE FFIKRQDDGD LDHRSSQEEV SEKLARTSVH ETSLTDWHSG FHISLDMLPD YIPMRLGESI LFAGKAIRVL
301: RNPSPAFQFQ KDKSFQQTMR GSQRIRGFMH SDFPETETEL DADLTGGELL PQSEADKIEA MLKDLKESSE FHKRSFECTV DSVRAIAASH LWQLVVVRAD
401: LNGHLKALKD YFLLEKGDFF QCFLEESRQL MRLPPRQSTG ESDLMVPFQL AATKTIAEED KYFSRVSLRM PSFGVTVRSS QADMVRSKVS LTGKANLTSD
501: TSVDGWDAIA LEYSVDWPMQ LFFTQEVLSK YLKVFQYLIR LKRTQMELEK SWASVMHQDH IESAQHRKDG LNGSTSQQRR QGIRPMWRVR EHMAFLIRNL
601: QFYIQVDVIE SQWKVLQTHI HDSQDFTELV GFHQEYLSAL ISQSFLDIGS VSRILDSIMK LCLQFCWNIE NQESNPNTSE LENIAEEFNK KSNSLYTILR
701: SSKLAGSQRA PFLRRFLLRL NFNSFYEATA RGVLNVVRQR PALPL
101: LSKQSREKKP SVYRRAIANG IGEILSVYRS AVLHIEQKLL AETTPILATV TEGLNKFFVL FPPLYEVILE IERDDIRGGQ LLNVLNKRCH CGVPELRTCL
201: QRLLWNGHQV MYNQLAAWMV YGILQDPHGE FFIKRQDDGD LDHRSSQEEV SEKLARTSVH ETSLTDWHSG FHISLDMLPD YIPMRLGESI LFAGKAIRVL
301: RNPSPAFQFQ KDKSFQQTMR GSQRIRGFMH SDFPETETEL DADLTGGELL PQSEADKIEA MLKDLKESSE FHKRSFECTV DSVRAIAASH LWQLVVVRAD
401: LNGHLKALKD YFLLEKGDFF QCFLEESRQL MRLPPRQSTG ESDLMVPFQL AATKTIAEED KYFSRVSLRM PSFGVTVRSS QADMVRSKVS LTGKANLTSD
501: TSVDGWDAIA LEYSVDWPMQ LFFTQEVLSK YLKVFQYLIR LKRTQMELEK SWASVMHQDH IESAQHRKDG LNGSTSQQRR QGIRPMWRVR EHMAFLIRNL
601: QFYIQVDVIE SQWKVLQTHI HDSQDFTELV GFHQEYLSAL ISQSFLDIGS VSRILDSIMK LCLQFCWNIE NQESNPNTSE LENIAEEFNK KSNSLYTILR
701: SSKLAGSQRA PFLRRFLLRL NFNSFYEATA RGVLNVVRQR PALPL
Arabidopsis Description
GCP4Gamma-tubulin complex component 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M350]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.