Factsheet for Os05t0154500-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
cytosol 2
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi, nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G095200.1	Wheat	extracellular, vacuole	86.6	87.3
TraesCS1D01G103700.1	Wheat	extracellular, vacuole	86.07	86.76
HORVU1Hr1G022100.2	Barley	extracellular, vacuole	86.07	86.76
TraesCS1B01G123000.1	Wheat	extracellular, vacuole	85.94	86.63
EES19050	Sorghum	extracellular, vacuole	85.28	85.51
GSMUA_Achr9P31020_001	Banana	extracellular, vacuole	71.09	71.09
Zm00001d037593_P004	Maize	plasma membrane	78.65	70.85
PGSC0003DMT400081381	Potato	cytosol, nucleus, plastid	29.84	70.09
VIT_07s0005g00610.t01	Wine grape	vacuole	68.97	69.99
KRH69283	Soybean	plasma membrane	65.12	66.98
KRH31863	Soybean	endoplasmic reticulum	64.72	66.67
CDX78203	Canola	extracellular, vacuole	64.59	65.46
AT3G53760.1	Thale cress	vacuole	64.59	65.37
CDX73526	Canola	extracellular, vacuole	64.19	65.05
Solyc09g075190.2.1	Tomato	extracellular, plasma membrane	64.19	64.62
KRH16759	Soybean	mitochondrion, nucleus	13.79	59.77
Bra007026.1-P	Field mustard	golgi, nucleus, plasma membrane	61.94	46.7
Os04t0501700-01	Rice	nucleus	17.51	18.57
Os09t0446200-01	Rice	cytosol, nucleus	17.11	15.34

Protein Annotations

Gene3D:1.20.120.1900	MapMan:20.1.2.1.4	EntrezGene:4337843	ProteinID:AAV31324.1	ProteinID:BAF16596.1	ProteinID:BAS92342.1
InterPro:GCP	GO:GO:0000003	GO:GO:0000226	GO:GO:0000922	GO:GO:0000923	GO:GO:0000930
GO:GO:0003674	GO:GO:0005198	GO:GO:0005200	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005815	GO:GO:0005819	GO:GO:0005856
GO:GO:0005874	GO:GO:0007020	GO:GO:0007049	GO:GO:0008150	GO:GO:0009506	GO:GO:0009605
GO:GO:0009607	GO:GO:0009624	GO:GO:0009987	GO:GO:0016043	GO:GO:0031122	GO:GO:0040007
GO:GO:0043015	GO:GO:0043622	GO:GO:0051011	GO:GO:0051321	GO:GO:0051415	GO:GO:0090307
EnsemblPlantsGene:Os05g0154500	EnsemblPlants:Os05t0154500-01	PFAM:PF04130	PANTHER:PTHR19302	PANTHER:PTHR19302:SF27	UniProt:Q60F24
SignalP:SignalP-noTM	UniParc:UPI00004503A7	RefSeq:XP_015637782.1	SEG:seg	:	:

Description

Spc97/Spc98 family protein. (Os05t0154500-01)

Coordinates

chr5:-:3181800..3188092

Molecular Weight (calculated)

85950.1 Da

IEP (calculated)

8.440

GRAVY (calculated)

-0.311

Length

754 amino acids

Sequence
(BLAST)

001: MLHELLLALL GFTGDFVLDA ASSPSATRRR RPVPPEAAAG GDVGPASFRL APDLTFLQPS ERSAIERLIS LGFYYRELNR FATESRDLSW INSPIDVSPT
101: HGEKTVKAKV RKGSAYRRAI ANGIAEILSV YRSAVLQVEQ NLLSDPLPIL ATVTHGLNKF EVLLPPLHEL VMEIEQKDIK GGQLLNLLHK RCHCGVPELQ
201: SCIQRLLWHG HQVMFNQLTS WMVYGILQDQ YNEFFIRRQE DRDKENDSSQ VDVADKFTQK SAKETSLTSW HTGFHVSLDM LPEYIHMRVA ESILFAGKAI
301: RVLRNPSPGA TLQESMNQSQ NVKGSYRMQS LIGGSGALKE LPNFPNISAE ELLPQAEADK IDAMLKELKH SSEFHKRLFE SAVGSIRTMA ANNLWQLVVV
401: RADLNGHLKA LKDYFLLAKG DFFQCFLEES RQLMRLPPRQ STAEADLMVP FQLAALKTIG DEDKYFARVS LRMSSFGIKA STSQKDLQKS STPEISSQGK
501: ATSELALDGW DSIALEYSVD WPLQLFFTPD VVSKYRKVFQ YLIRLKRTQM ELEKSWAAVM HQDHADFSDY CKDRKNGDAT QLRRQRSKPF WRVREHMAFL
601: IRNLQFYIQV DVIESQWNVL QAHVQDSHDF TELVTFHQEY LSALISQSFL DIGSVSRILD SIMKLCLQFC WSIEQYENRR NMLEIDHITE EFNKKSNSLY
701: TILRSSRLAG SQRAPFLRQF LMRLNYNSFF ETTARGVMNS AGGRLRPSTA GTQL

Best Arabidopsis Sequence Match ( AT3G53760.1 )
(BLAST)

001: MLHELLLALL GFTGDLIVDE REQRKTLGLA FNSDSPLSDE CTFKLAPDIS FIEPSERDLI ERLIKLGFYY RELDRFAKKS RNLSWIRSVT SVHPLERADE
101: LSKQSREKKP SVYRRAIANG IGEILSVYRS AVLHIEQKLL AETTPILATV TEGLNKFFVL FPPLYEVILE IERDDIRGGQ LLNVLNKRCH CGVPELRTCL
201: QRLLWNGHQV MYNQLAAWMV YGILQDPHGE FFIKRQDDGD LDHRSSQEEV SEKLARTSVH ETSLTDWHSG FHISLDMLPD YIPMRLGESI LFAGKAIRVL
301: RNPSPAFQFQ KDKSFQQTMR GSQRIRGFMH SDFPETETEL DADLTGGELL PQSEADKIEA MLKDLKESSE FHKRSFECTV DSVRAIAASH LWQLVVVRAD
401: LNGHLKALKD YFLLEKGDFF QCFLEESRQL MRLPPRQSTG ESDLMVPFQL AATKTIAEED KYFSRVSLRM PSFGVTVRSS QADMVRSKVS LTGKANLTSD
501: TSVDGWDAIA LEYSVDWPMQ LFFTQEVLSK YLKVFQYLIR LKRTQMELEK SWASVMHQDH IESAQHRKDG LNGSTSQQRR QGIRPMWRVR EHMAFLIRNL
601: QFYIQVDVIE SQWKVLQTHI HDSQDFTELV GFHQEYLSAL ISQSFLDIGS VSRILDSIMK LCLQFCWNIE NQESNPNTSE LENIAEEFNK KSNSLYTILR
701: SSKLAGSQRA PFLRRFLLRL NFNSFYEATA RGVLNVVRQR PALPL

Arabidopsis Description

GCP4Gamma-tubulin complex component 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M350]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.