Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 39.79 | 77.39 |
| KRH66718 | Soybean | plastid | 66.93 | 69.44 |
| KRG95055 | Soybean | nucleus | 77.0 | 65.49 |
| KRH66713 | Soybean | nucleus | 76.23 | 64.98 |
| KRH66715 | Soybean | nucleus | 61.24 | 60.46 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 57.36 | 49.01 |
| Solyc10g078330.1.1 | Tomato | nucleus | 51.42 | 47.04 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 55.56 | 46.54 |
| PGSC0003DMT400018480 | Potato | nucleus | 50.9 | 46.35 |
| Solyc10g080950.1.1 | Tomato | nucleus | 53.75 | 45.02 |
| PGSC0003DMT400072211 | Potato | nucleus | 53.23 | 44.4 |
| CDY69551 | Canola | nucleus | 40.31 | 43.94 |
| TraesCSU01G217300.1 | Wheat | cytosol | 24.29 | 43.52 |
| CDY62475 | Canola | nucleus | 39.02 | 43.02 |
| Bra002046.1-P | Field mustard | nucleus | 43.67 | 43.0 |
| AT3G11520.1 | Thale cress | nucleus | 45.99 | 43.0 |
| Bra028741.1-P | Field mustard | nucleus | 45.99 | 42.89 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 50.65 | 42.89 |
| AT4G37490.1 | Thale cress | nucleus | 47.03 | 42.52 |
| HORVU0Hr1G001680.1 | Barley | nucleus | 35.14 | 42.5 |
| Bra005880.1-P | Field mustard | nucleus, plastid | 45.22 | 42.27 |
| CDY11354 | Canola | plastid | 47.03 | 42.03 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 45.74 | 41.65 |
| AT5G06150.1 | Thale cress | nucleus | 47.8 | 41.57 |
| CDX69311 | Canola | nucleus | 44.96 | 41.53 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 42.89 | 41.29 |
| KRH14611 | Soybean | nucleus | 46.77 | 41.23 |
| CDX80988 | Canola | plastid | 44.96 | 40.65 |
| CDX75659 | Canola | nucleus | 44.7 | 40.42 |
| Bra011769.1-P | Field mustard | nucleus | 44.7 | 40.42 |
| HORVU1Hr1G068080.1 | Barley | plastid | 35.66 | 40.35 |
| KRH73516 | Soybean | nucleus | 45.74 | 40.23 |
| GSMUA_Achr10P... | Banana | nucleus | 47.03 | 40.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.75 | 39.93 |
| Zm00001d019469_P001 | Maize | extracellular | 14.73 | 39.86 |
| KXG24389 | Sorghum | nucleus | 25.84 | 39.68 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 43.67 | 38.85 |
| EES03772 | Sorghum | nucleus, plastid | 43.15 | 37.19 |
| TraesCS3D01G326600.1 | Wheat | nucleus | 43.67 | 37.14 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 40.31 | 37.14 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 43.41 | 37.09 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 41.6 | 36.93 |
| TraesCS3A01G333000.2 | Wheat | nucleus | 43.67 | 36.74 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 42.12 | 36.3 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 40.83 | 36.24 |
| TraesCS3B01G363200.3 | Wheat | nucleus | 43.15 | 36.23 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 40.57 | 36.01 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 40.57 | 35.84 |
| TraesCS3D01G195200.1 | Wheat | plastid | 38.24 | 35.84 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 40.05 | 35.47 |
| TraesCS3A01G192100.1 | Wheat | nucleus, plastid | 37.73 | 35.27 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 39.53 | 35.09 |
| Zm00001d010656_P001 | Maize | nucleus | 40.31 | 34.98 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 39.79 | 34.76 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 39.79 | 34.76 |
| Os01t0281200-01 | Rice | nucleus | 37.98 | 34.75 |
| EES18429 | Sorghum | mitochondrion | 40.57 | 34.13 |
| Os05t0493500-00 | Rice | nucleus | 41.86 | 33.26 |
| Zm00001d043164_P002 | Maize | nucleus | 41.09 | 32.85 |
| TraesCS7A01G229300.1 | Wheat | endoplasmic reticulum | 26.36 | 31.0 |
| EES02793 | Sorghum | nucleus | 36.69 | 30.67 |
| Zm00001d008221_P001 | Maize | nucleus | 37.47 | 30.27 |
| KRH60628 | Soybean | nucleus | 31.27 | 29.88 |
| KRH52056 | Soybean | nucleus | 16.28 | 29.86 |
| KRH51329 | Soybean | nucleus, plastid | 31.01 | 28.92 |
| Os02t0627800-00 | Rice | cytosol, mitochondrion, peroxisome | 28.94 | 28.28 |
| HORVU3Hr1G040990.2 | Barley | nucleus, plastid | 35.92 | 28.25 |
| KRH76553 | Soybean | nucleus | 30.75 | 27.55 |
| KRH28901 | Soybean | nucleus | 30.49 | 27.25 |
| CDY14091 | Canola | plastid | 45.74 | 26.98 |
| KRH61371 | Soybean | nucleus | 23.26 | 25.79 |
| Zm00001d020033_P001 | Maize | nucleus | 36.18 | 25.74 |
| Zm00001d020996_P001 | Maize | nucleus | 35.92 | 25.55 |
| CDY04980 | Canola | nucleus | 46.51 | 25.07 |
| AT1G34460.5 | Thale cress | cytosol | 31.27 | 24.3 |
| KRH61375 | Soybean | nucleus | 20.41 | 24.16 |
| KRH05614 | Soybean | nucleus | 22.22 | 23.43 |
| KRH15427 | Soybean | nucleus, plastid | 21.96 | 23.35 |
| KRH52055 | Soybean | nucleus | 21.45 | 23.18 |
| KRH61373 | Soybean | nucleus, plastid | 21.71 | 22.4 |
| KRH61369 | Soybean | nucleus | 18.6 | 22.02 |
| KRH16044 | Soybean | nucleus | 26.1 | 21.91 |
| KRH05060 | Soybean | nucleus | 25.84 | 21.79 |
| KRH64625 | Soybean | plastid | 26.1 | 20.87 |
| KRH17986 | Soybean | plastid | 26.87 | 20.68 |
| KRH53279 | Soybean | plastid | 25.58 | 20.62 |
| KRH47513 | Soybean | nucleus | 24.81 | 20.17 |
| KRH61850 | Soybean | nucleus | 25.32 | 20.08 |
| KRH52524 | Soybean | nucleus | 24.29 | 20.04 |
| KRH16410 | Soybean | plastid | 25.84 | 19.84 |
| KRH44391 | Soybean | nucleus | 23.77 | 19.53 |
| KRH44849 | Soybean | nucleus | 32.3 | 16.87 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:35.1 | UniProt:A0A0R0EM05 | EMBL:ACUP02012075 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_19G127300 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | EnsemblPlants:KRG95056 | ProteinID:KRG95056 | ProteinID:KRG95056.1 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0006ED8EE8 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:38587425..38591555
Molecular Weight (calculated)
43587.5 Da
IEP (calculated)
9.424
GRAVY (calculated)
-0.061
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRPIVQQE ARVIYFYDPL RIFGAKLLGN APAPATAENN KKQACANVAG SPTVANGGVV VAKRMAPKPD QKKVVLKPKP KKVIDIKASP NKKEVLKDKK
101: KEGDSNFKKK SHHTLTLVFT TRSKATWGIT NKLKERIIDI DSDDVDDELV VVECIDDIYK AILFDWLILV HTKFNLLLET LYLTINIVDR FLAVKNVPKR
201: ELQLIDISAL LMATKYEEIY PPQVFGNFVC LSDRAYTHEQ ILVMEKIILA KLEWTLTMPI PLVFLLRFIK ASVPDQELEN MAHFLSELGM MHYATIKYFP
301: SMVAASAVFA ARCALNKAPL WNETLKLHSG YSQEQLMDCA RLLVSFHSTV ANREEKVVYL KYSDPEKGVV AMLPPAKNLL PEGSNSQ
101: KEGDSNFKKK SHHTLTLVFT TRSKATWGIT NKLKERIIDI DSDDVDDELV VVECIDDIYK AILFDWLILV HTKFNLLLET LYLTINIVDR FLAVKNVPKR
201: ELQLIDISAL LMATKYEEIY PPQVFGNFVC LSDRAYTHEQ ILVMEKIILA KLEWTLTMPI PLVFLLRFIK ASVPDQELEN MAHFLSELGM MHYATIKYFP
301: SMVAASAVFA ARCALNKAPL WNETLKLHSG YSQEQLMDCA RLLVSFHSTV ANREEKVVYL KYSDPEKGVV AMLPPAKNLL PEGSNSQ
001: MASSRVSDLP HQRGIAGEIK PKNVAGHGRQ NRKVLGDIGN LVTGRDVATG KDVAKKAKQP QQQTKAEVIV ISPDENEKCK PHFSRRTHIR GTKTFTATLR
101: ARSKAASGLK DAVIDIDAVD ANNELAAVEY VEDIFKFYRT VEEEGGIKDY IGSQPEINEK MRSILIDWLV DVHRKFELMP ETLYLTINLV DRFLSLTMVH
201: RRELQLLGLG AMLIACKYEE IWAPEVNDFV CISDNAYNRK QVLAMEKSIL GQVEWYITVP TPYVFLARYV KAAVPCDAEM EKLVFYLAEL GLMQYPIVVL
301: NRPSMLAASA VYAARQILKK TPFWTETLKH HTGYSEDEIM EHAKMLMKLR DSASESKLIA VFKKYSVSEN AEVALLPSLD DFSVSCA
101: ARSKAASGLK DAVIDIDAVD ANNELAAVEY VEDIFKFYRT VEEEGGIKDY IGSQPEINEK MRSILIDWLV DVHRKFELMP ETLYLTINLV DRFLSLTMVH
201: RRELQLLGLG AMLIACKYEE IWAPEVNDFV CISDNAYNRK QVLAMEKSIL GQVEWYITVP TPYVFLARYV KAAVPCDAEM EKLVFYLAEL GLMQYPIVVL
301: NRPSMLAASA VYAARQILKK TPFWTETLKH HTGYSEDEIM EHAKMLMKLR DSASESKLIA VFKKYSVSEN AEVALLPSLD DFSVSCA
Arabidopsis Description
CYCB1-4CYCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VPU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.