CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89142	Soybean	nucleus	73.18	72.75
GSMUA_Achr10P...	Banana	nucleus	17.2	40.55
GSMUA_Achr11P...	Banana	nucleus	16.33	36.96
VIT_05s0020g00100.t01	Wine grape	mitochondrion	7.14	36.84
Bra022338.1-P	Field mustard	nucleus	11.95	31.42
Bra032269.1-P	Field mustard	nucleus	20.12	31.36
Bra018764.1-P	Field mustard	nucleus	20.12	27.6
TraesCS7B01G183600.1	Wheat	nucleus	20.99	25.53
Os08t0192900-01	Rice	nucleus	21.28	25.52
HORVU7Hr1G068630.2	Barley	nucleus	21.28	25.52
Bra014162.1-P	Field mustard	nucleus	21.28	25.13
TraesCS7D01G289200.1	Wheat	nucleus	20.85	25.0
AT1G48920.1	Thale cress	nucleus	19.39	23.88
PGSC0003DMT400003013	Potato	nucleus	21.14	23.16
EER94106	Sorghum	nucleus	22.3	23.04
TraesCS7A01G286200.1	Wheat	nucleus	20.26	22.86
Solyc02g014310.2.1	Tomato	nucleus	20.99	22.82
KRH29160	Soybean	nucleus	24.34	22.33
Os04t0620700-01	Rice	nucleus	22.89	22.21
KRH24189	Soybean	nucleus	24.05	22.18
EES14672	Sorghum	nucleus	20.41	21.64
CDY20455	Canola	nucleus	9.48	21.52
Bra018762.1-P	Field mustard	nucleus	19.68	20.93
Zm00001d032748_P001	Maize	nucleus	22.89	20.44
Zm00001d049399_P001	Maize	plasma membrane	20.55	20.14
TraesCS2B01G486000.4	Wheat	nucleus	21.28	20.03
Bra022337.1-P	Field mustard	nucleus	17.06	19.57
TraesCS2D01G465200.1	Wheat	nucleus	20.7	19.43
AT3G18610.1	Thale cress	nucleus	17.49	18.87
TraesCS2A01G464300.3	Wheat	nucleus	20.12	18.85
CDY36208	Canola	endoplasmic reticulum, mitochondrion, nucleus, vacuole	9.62	12.79

Protein Annotations

EntrezGene:102664796	MapMan:17.1.1.1.1	Gene3D:3.30.70.330	EMBL:ACUP02006067	EnsemblPlantsGene:GLYMA_09G281700	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	UniProt:K7LGK2
EnsemblPlants:KRH40855	ProteinID:KRH40855	ProteinID:KRH40855.1	InterPro:NUCL_RRM1	InterPro:NUCL_RRM2	InterPro:Nucleotide-bd_a/b_plait_sf
PFAM:PF00076	PFscan:PS50102	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54928
UniParc:UPI0002960BFB	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:49706859..49732701

Molecular Weight (calculated)

76263.6 Da

IEP (calculated)

6.483

GRAVY (calculated)

-0.869

Length

686 amino acids

Sequence
(BLAST)

001: MGNKSDPKAG ATAVPPPRIG KREGENEDEQ QVNAKKHKRH EVAEEQRIMD EIVSDDSFED FEPDKNPEAK KDSLSKQEKK GKPDSANCSG SLESLADGSE
101: EGKGNMDIDE GNHSEECNEE TLEKMQVLPV KSSENSEKGI EEKDPKAPQE NPKMLATPNE RNAGSKTIVT RNLSYSVERA DLENLFKECG EIVDVRLHTD
201: AEGRFRGFGH VEFATAEAAQ NALQLNNTEL LRCRIRVVIA PQKNKHRSFH VISSNSSHSF QRSEGTQPVK GSEISGDCEQ ETEPKLIATC KEPSAASKTI
301: YAKNLAYSME QDDMEYLFKN CGEIVSIRLH TDHNRRFKGY GHVEFATTEA AQKALELNNT VYLGRRVGVF IAKGKGEYTS NRSNWSKSFH QSEQTKPIKS
401: TESSEYCEEE VEGKASNSSW ESSKRVATLK EQNAPSKTIY VKNLSYRVER ADMENLFKEC GKIVDVHLHR NPDGRLNGFG QVEFATAEAA KKALELHNTE
501: LLRRPIGVDL AEEKGEYTYS RSNWSNSFQK CERDQSPTVF VTGFDSSLPA EKIKASLEEH FGSCGEIQRI SIPTFHDSGA VKGFAHLGFK DVVSVRKALH
601: LDQNELGGFH LRVEKAKPRR ENQGIGGGRG GGGGHQFGGR DGSGYTSRMG WGRSGGGGWH SLHFSDEGTG SCLREMIINM GLRNWF

Best Arabidopsis Sequence Match ( AT3G18610.2 )
(BLAST)

001: MGKSSKKSVT EVETPASMTK PLKKGKRDAE EDLDMQVTKK QKKELIDVVQ KEKAEKTVPK KVESSSSDAS DSDEEEKTKE TPSKLKDESS SEEEDDSSSD
101: EEIAPAKKRP EPIKKAKVES SSSDDDSTSD EETVPMKKQT AVLEKAKAES SSSDDGSSSD EEPTPAKKEP IVVKKDSSDE SSSDEETPVV KKKPTTVVKD
201: AKAESSSSEE ESSSDDEPTP AKKPTVVKNA KPAAKDSSSS EEDSDEEESD DEKPPTKKAK VSSKTSKQES SSDESSDESD KEESKDEKVT PKKKDSDVEM
301: VDAEQKSNAK QPKTPTNQTQ GGSKTLFAGN LSYQIARSDI ENFFKEAGEV VDVRLSSFDD GSFKGYGHIE FASPEEAQKA LEMNGKLLLG RDVRLDLANE
401: RGTPRNSNPG RKGEGSQSRT IYVRGFSSSL GEDEIKKELR SHFSKCGEVT RVHVPTDRET GASRGFAYID LTSGFDEALQ LSGSEIGGGN IHVEESRPRD
501: SDEGRSSNRA PARGAPRGRH SDRAPRGGRF SDRAPRGRHS DRGAPRGRFS TRGRGPSKPS VMESSKGTKT VFNDEE

Arabidopsis Description

NUCL2Nucleolin 2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEP5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.