Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92252 | Canola | nucleus | 93.98 | 93.51 |
| Bra022338.1-P | Field mustard | nucleus | 24.25 | 55.56 |
| VIT_05s0020g00100.t01 | Wine grape | mitochondrion | 10.54 | 47.37 |
| Bra018764.1-P | Field mustard | nucleus | 36.29 | 43.4 |
| Bra032269.1-P | Field mustard | nucleus | 31.27 | 42.5 |
| AT3G18610.1 | Thale cress | nucleus | 44.65 | 41.98 |
| GSMUA_Achr10P... | Banana | nucleus | 20.07 | 41.24 |
| GSMUA_Achr11P... | Banana | nucleus | 20.57 | 40.59 |
| Bra014162.1-P | Field mustard | nucleus | 39.3 | 40.45 |
| Bra018762.1-P | Field mustard | nucleus | 38.96 | 36.12 |
| Os08t0192900-01 | Rice | nucleus | 32.94 | 34.44 |
| TraesCS7B01G183600.1 | Wheat | nucleus | 30.94 | 32.8 |
| HORVU7Hr1G068630.2 | Barley | nucleus | 31.27 | 32.69 |
| Solyc02g014310.2.1 | Tomato | nucleus | 34.45 | 32.65 |
| PGSC0003DMT400003013 | Potato | nucleus | 33.61 | 32.11 |
| TraesCS7D01G289200.1 | Wheat | nucleus | 30.6 | 31.99 |
| VIT_01s0011g02180.t01 | Wine grape | nucleus | 37.96 | 31.97 |
| EER94106 | Sorghum | nucleus | 32.78 | 29.52 |
| TraesCS7A01G286200.1 | Wheat | nucleus | 29.77 | 29.28 |
| Os04t0620700-01 | Rice | nucleus | 33.78 | 28.57 |
| Zm00001d049399_P001 | Maize | plasma membrane | 33.11 | 28.29 |
| EES14672 | Sorghum | nucleus | 30.43 | 28.13 |
| KRH24189 | Soybean | nucleus | 34.11 | 27.42 |
| TraesCS2B01G486000.4 | Wheat | nucleus | 32.61 | 26.75 |
| KRH29160 | Soybean | nucleus | 33.44 | 26.74 |
| Zm00001d032748_P001 | Maize | nucleus | 34.28 | 26.69 |
| TraesCS2D01G465200.1 | Wheat | nucleus | 32.44 | 26.54 |
| TraesCS2A01G464300.3 | Wheat | nucleus | 30.94 | 25.27 |
| Bra005114.1-P | Field mustard | nucleus | 9.7 | 24.79 |
| Bra020207.1-P | Field mustard | nucleus | 9.53 | 20.43 |
| Bra012610.1-P | Field mustard | nucleus | 5.85 | 18.23 |
| Bra032377.1-P | Field mustard | nucleus, plastid | 4.68 | 17.83 |
| KRG89142 | Soybean | nucleus | 19.73 | 17.1 |
| KRH40855 | Soybean | nucleus | 19.57 | 17.06 |
| Bra010724.1-P | Field mustard | nucleus | 16.56 | 11.48 |
Protein Annotations
| MapMan:17.1.1.1.1 | Gene3D:3.30.70.330 | EnsemblPlantsGene:Bra022337 | EnsemblPlants:Bra022337.1 | EnsemblPlants:Bra022337.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:M4E0P0 |
| InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI000254814E | SEG:seg | : | : | : |
Description
AT3G18610 (E=6e-069) ATRANGAP1, PARLL1 | ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding
Coordinates
chrA05:+:18315195..18319066
Molecular Weight (calculated)
64523.1 Da
IEP (calculated)
5.228
GRAVY (calculated)
-1.124
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRSKKESLT KVEAASLVST TKPSKKSKRD AEVDLDIKKK PKKQKKEVIQ AEKKAPPPKK VETSSSSSDS EDEVKIKKVT AKKPLSKKDD SSSEDSSSDE
101: EAVTVKKKPA ILKKAKAESS SSEDDSSSSD EEAAPPKKQP AVVTKAKAES SSSEDDESSS DEEVVPAKKQ PAVVKKAKVE SISSEEESSS DEEPAPAKKE
201: PAVVKKDSSS EEESSSDEEP VPAKKQLTVV KSVKPAAKDS SSSEDESDED SDEESEDKRK KEPATQKLPA AAKTKSESSE EDSDDEESDD EKPPTKKAKV
301: SPTKTSKQES SSGESSEEES EDEKVTPKKK DTDVEMAEAE QKSEAKQPKT PTTQRPTTQA RGGSTTLFAG NLPFQIEKSD VEDFFKEVGG IVDVRFASDS
401: DGRLKGYGHF EFASVEAAQK ALKLNGKQLL GRTIRLSDAN AKPAPRSSNA DGNFQSNRKG EGSQVKTIFV SRFDKSVAES DMRCALRGHF SDCGEITRIS
501: LPCDQETGAT RGMAYLDLKE EDGFKKALEL NGSELGGWKI LVLEGKPRGW NSDGNNSGRI PPGRGRTGRV PPGRGRPGRP SKPSILASAE GKKIVFDD
101: EAVTVKKKPA ILKKAKAESS SSEDDSSSSD EEAAPPKKQP AVVTKAKAES SSSEDDESSS DEEVVPAKKQ PAVVKKAKVE SISSEEESSS DEEPAPAKKE
201: PAVVKKDSSS EEESSSDEEP VPAKKQLTVV KSVKPAAKDS SSSEDESDED SDEESEDKRK KEPATQKLPA AAKTKSESSE EDSDDEESDD EKPPTKKAKV
301: SPTKTSKQES SSGESSEEES EDEKVTPKKK DTDVEMAEAE QKSEAKQPKT PTTQRPTTQA RGGSTTLFAG NLPFQIEKSD VEDFFKEVGG IVDVRFASDS
401: DGRLKGYGHF EFASVEAAQK ALKLNGKQLL GRTIRLSDAN AKPAPRSSNA DGNFQSNRKG EGSQVKTIFV SRFDKSVAES DMRCALRGHF SDCGEITRIS
501: LPCDQETGAT RGMAYLDLKE EDGFKKALEL NGSELGGWKI LVLEGKPRGW NSDGNNSGRI PPGRGRTGRV PPGRGRPGRP SKPSILASAE GKKIVFDD
001: MGKSSKKSVT EVETPASMTK PLKKGKRDAE EDLDMQVTKK QKKELIDVVQ KEKAEKTVPK KVESSSSDAS DSDEEEKTKE TPSKLKDESS SEEEDDSSSD
101: EEIAPAKKRP EPIKKAKVES SSSDDDSTSD EETAPVKKQP AVLEKAKVES SSSDDDSSSD EETVPMKKQT AVLEKAKAES SSSDDGSSSD EEPTPAKKEP
201: IVVKKDSSDE SSSDEETPVV KKKPTTVVKD AKAESSSSEE ESSSDDEPTP AKKPTVVKNA KPAAKDSSSS EEDSDEEESD DEKPPTKKAK VSSKTSKQES
301: SSDESSDESD KEESKDEKVT PKKKDSDVEM VDAEQKSNAK QPKTPTNQTQ GGSKTLFAGN LSYQIARSDI ENFFKEAGEV VDVRLSSFDD GSFKGYGHIE
401: FASPEEAQKA LEMNGKLLLG RDVRLDLANE RGTPRNSNPG RKGEGSQSRT IYVRGFSSSL GEDEIKKELR SHFSKCGEVT RVHVPTDRET GASRGFAYID
501: LTSGFDEALQ LSGSEIGGGN IHVEESRPRD SDEGRSSNRA PARGAPRGRH SDRAPRGGRF SDRAPRGRHS DRGAPRGRFS TRGRGPSKPS VMESSKGTKT
601: VFNDEE
101: EEIAPAKKRP EPIKKAKVES SSSDDDSTSD EETAPVKKQP AVLEKAKVES SSSDDDSSSD EETVPMKKQT AVLEKAKAES SSSDDGSSSD EEPTPAKKEP
201: IVVKKDSSDE SSSDEETPVV KKKPTTVVKD AKAESSSSEE ESSSDDEPTP AKKPTVVKNA KPAAKDSSSS EEDSDEEESD DEKPPTKKAK VSSKTSKQES
301: SSDESSDESD KEESKDEKVT PKKKDSDVEM VDAEQKSNAK QPKTPTNQTQ GGSKTLFAGN LSYQIARSDI ENFFKEAGEV VDVRLSSFDD GSFKGYGHIE
401: FASPEEAQKA LEMNGKLLLG RDVRLDLANE RGTPRNSNPG RKGEGSQSRT IYVRGFSSSL GEDEIKKELR SHFSKCGEVT RVHVPTDRET GASRGFAYID
501: LTSGFDEALQ LSGSEIGGGN IHVEESRPRD SDEGRSSNRA PARGAPRGRH SDRAPRGGRF SDRAPRGRHS DRGAPRGRFS TRGRGPSKPS VMESSKGTKT
601: VFNDEE
Arabidopsis Description
NUCL2Nucleolin 2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEP5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.