Factsheet for HORVU7Hr1G068630.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G183600.1	Wheat	nucleus	87.24	88.48
TraesCS7D01G289200.1	Wheat	nucleus	88.11	88.11
TraesCS7A01G286200.1	Wheat	nucleus	77.1	72.53
Os08t0192900-01	Rice	nucleus	55.77	55.77
GSMUA_Achr10P...	Banana	nucleus	28.15	55.33
GSMUA_Achr11P...	Banana	nucleus	27.1	51.16
VIT_05s0020g00100.t01	Wine grape	mitochondrion	10.66	45.86
CDY60074	Canola	nucleus	33.22	43.18
Bra032269.1-P	Field mustard	nucleus	33.22	43.18
CDY65178	Canola	nucleus	36.01	42.74
EES14672	Sorghum	nucleus	48.08	42.5
Bra018764.1-P	Field mustard	nucleus	36.71	42.0
CDX93706	Canola	nucleus	36.36	41.52
Bra022338.1-P	Field mustard	nucleus	18.53	40.61
Zm00001d049399_P001	Maize	plasma membrane	48.78	39.86
CDX92253	Canola	nucleus	19.06	38.65
AT1G48920.1	Thale cress	nucleus	37.41	38.42
CDY59893	Canola	nucleus	34.09	38.16
CDX77274	Canola	nucleus	38.29	37.82
Bra014162.1-P	Field mustard	nucleus	38.11	37.52
PGSC0003DMT400003013	Potato	nucleus	39.16	35.78
Solyc02g014310.2.1	Tomato	nucleus	37.59	34.07
Bra018762.1-P	Field mustard	nucleus	38.29	33.95
CDY16474	Canola	nucleus	27.97	33.06
KRH24189	Soybean	nucleus	42.66	32.8
VIT_01s0011g02180.t01	Wine grape	nucleus	40.38	32.54
CDX93704	Canola	nucleus	37.94	31.82
AT3G18610.1	Thale cress	nucleus	35.14	31.6
KRH29160	Soybean	nucleus	40.91	31.28
CDX92252	Canola	nucleus	32.87	31.28
Bra022337.1-P	Field mustard	nucleus	32.69	31.27
CDX99340	Canola	nucleus	33.22	30.4
CDY20455	Canola	nucleus	11.89	22.52
KRH40855	Soybean	nucleus	25.52	21.28
CDX99339	Canola	nucleus	21.33	20.82
KRG89142	Soybean	nucleus	24.65	20.43
CDY36208	Canola	endoplasmic reticulum, mitochondrion, nucleus, vacuole	13.29	14.73

Protein Annotations

MapMan:17.1.1.1.1	Gene3D:3.30.70.330	UniProt:A0A287WRZ3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	EnsemblPlantsGene:HORVU7Hr1G068630	EnsemblPlants:HORVU7Hr1G068630.2	InterPro:IPR000504	InterPro:IPR012677	InterPro:NUCL_RRM2
InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFscan:PS50102	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360
SUPFAM:SSF54928	UniParc:UPI000B460AF7	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:363314120..363319259

Molecular Weight (calculated)

59476.1 Da

IEP (calculated)

5.194

GRAVY (calculated)

-1.100

Length

572 amino acids

Sequence
(BLAST)

001: MGKSSKKSAA PTVVAPSAVL PKGKAGKKRE ADDEIEKAVS AKKQKAAPAK AVTAPKEAAR KAKKQPPPKK VDSSSSEEES SESEEDEVPK KTAKPVKQES
101: SDDSSDDSSS DEEIAKKPSA KPATLAASNG SKKGKPESSS SSSGDESDED EKPAAPVKIT PVNESESSET DSDDSSDEDV PAKSPATATK KADSSDSSES
201: ESESEDEQNS KKAVQATKIA PAAAKRKDDS SDSSDSDESD EEPRQKKQKD AGKVAPKSVK KDSSSDDDSS NESSDDEPKK EVMTATKSQK EEPKTPASNK
301: GQATGTKTLW MGNLSFNIEY DQVKQFFAQI GEVVDVRLAT HEDGHPKGFG HVEFASEEDA QKALDALNGG DLIGRPVRLD LAAERGASAL RTRDGGSFGK
401: PSGGPSLSVF VKGFDSSQQE DAIRSSLQEH FSKCGEITRV SVPMDHENGA SKGIAYMDFT DESSFSKALE LSGSDLGGCN LYVAEAKPKG QFGGGGGRSG
501: GRDGGRSGGG RFGRSGGRDG GGRFGRSGGR DGGGRFGRSG GRDGGRGGGR GYQSRQSAGT ASAGKKTTFG DD

Best Arabidopsis Sequence Match ( AT3G18610.1 )
(BLAST)

001: MGKSSKKSVT EVETPASMTK PLKKGKRDAE EDLDMQVTKK QKKELIDVVQ KEKAEKTVPK KVESSSSDAS DSDEEEKTKE TPSKLKDESS SEEEDDSSSD
101: EEIAPAKKRP EPIKKAKVES SSSDDDSTSD EETAPVKKQP AVLEKAKVES SSSDDDSSSD EETVPVKKQP AVLEKAKIES SSSDDDSSSD EETVPMKKQT
201: AVLEKAKAES SSSDDGSSSD EEPTPAKKEP IVVKKDSSDE SSSDEETPVV KKKPTTVVKD AKAESSSSEE ESSSDDEPTP AKKPTVVKNA KPAAKDSSSS
301: EEDSDEEESD DEKPPTKKAK VSSKTSKQES SSDESSDESD KEESKDEKVT PKKKDSDVEM VDAEQKSNAK QPKTPTNQTQ GGSKTLFAGN LSYQIARSDI
401: ENFFKEAGEV VDVRLSSFDD GSFKGYGHIE FASPEEAQKA LEMNGKLLLG RDVRLDLANE RGTPRNSNPG RKGEGSQSRT IYVRGFSSSL GEDEIKKELR
501: SHFSKCGEVT RVHVPTDRET GASRGFAYID LTSGFDEALQ LSGSEIGGGN IHVEESRPRD SDEGRSSNRA PARGAPRGRH SDRAPRGGRF SDRAPRGRHS
601: DRGAPRGRFS TRGRGPSKPS VMESSKGTKT VFNDEE

Arabidopsis Description

NUCL2Nucleolin 2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEP5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.