Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92253 | Canola | nucleus | 79.31 | 73.4 |
| VIT_05s0020g00100.t01 | Wine grape | mitochondrion | 18.77 | 36.84 |
| GSMUA_Achr10P... | Banana | nucleus | 37.16 | 33.33 |
| CDX99339 | Canola | nucleus | 70.5 | 31.4 |
| GSMUA_Achr11P... | Banana | nucleus | 36.4 | 31.35 |
| Bra032269.1-P | Field mustard | nucleus | 44.83 | 26.59 |
| Bra022337.1-P | Field mustard | nucleus | 55.56 | 24.25 |
| Bra018764.1-P | Field mustard | nucleus | 43.3 | 22.6 |
| Bra005114.1-P | Field mustard | nucleus | 18.77 | 20.94 |
| Bra012610.1-P | Field mustard | nucleus | 15.33 | 20.83 |
| Bra014162.1-P | Field mustard | nucleus | 44.44 | 19.97 |
| TraesCS7B01G183600.1 | Wheat | nucleus | 41.76 | 19.33 |
| AT3G18610.1 | Thale cress | nucleus | 45.98 | 18.87 |
| HORVU7Hr1G068630.2 | Barley | nucleus | 40.61 | 18.53 |
| TraesCS7D01G289200.1 | Wheat | nucleus | 39.46 | 18.01 |
| Os08t0192900-01 | Rice | nucleus | 39.08 | 17.83 |
| Bra018762.1-P | Field mustard | nucleus | 43.68 | 17.67 |
| PGSC0003DMT400003013 | Potato | nucleus | 41.0 | 17.09 |
| Solyc02g014310.2.1 | Tomato | nucleus | 41.0 | 16.96 |
| TraesCS7A01G286200.1 | Wheat | nucleus | 39.46 | 16.94 |
| VIT_01s0011g02180.t01 | Wine grape | nucleus | 45.59 | 16.76 |
| Bra020207.1-P | Field mustard | nucleus | 17.24 | 16.13 |
| EER94106 | Sorghum | nucleus | 39.46 | 15.51 |
| EES14672 | Sorghum | nucleus | 37.16 | 14.99 |
| Os04t0620700-01 | Rice | nucleus | 39.85 | 14.71 |
| Bra032377.1-P | Field mustard | nucleus, plastid | 8.81 | 14.65 |
| KRH29160 | Soybean | nucleus | 41.76 | 14.57 |
| KRH24189 | Soybean | nucleus | 41.0 | 14.38 |
| Zm00001d032748_P001 | Maize | nucleus | 42.15 | 14.32 |
| TraesCS2B01G486000.4 | Wheat | nucleus | 39.85 | 14.27 |
| TraesCS2D01G465200.1 | Wheat | nucleus | 39.46 | 14.09 |
| Zm00001d049399_P001 | Maize | plasma membrane | 37.55 | 14.0 |
| TraesCS2A01G464300.3 | Wheat | nucleus | 39.08 | 13.93 |
| KRG89142 | Soybean | nucleus | 32.57 | 12.32 |
| KRH40855 | Soybean | nucleus | 31.42 | 11.95 |
| Bra010724.1-P | Field mustard | nucleus | 22.22 | 6.73 |
Protein Annotations
| MapMan:17.1.1.1.1 | Gene3D:3.30.70.330 | EnsemblPlantsGene:Bra022338 | EnsemblPlants:Bra022338.1 | EnsemblPlants:Bra022338.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:M4E0P1 |
| InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI0002548078 | SEG:seg | : | : | : |
Description
AT3G18610 (E=4e-045) ATRANGAP1, PARLL1 | ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding
Coordinates
chrA05:+:18310267..18311893
Molecular Weight (calculated)
28857.7 Da
IEP (calculated)
10.399
GRAVY (calculated)
-0.831
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKSCKKEAI TKVEAAAALD SNTKPSKKSK RDVEVDLDIP KDAKKQKKEL IQAVQKAPPK KNKKKKKKKS KTLFAGRLPF HTEKSDLEKF FKEVGEIKDV
101: RLAKGIAHVE FASEEAAQKA LKLNGEPLLG RNILLDFANT KPAPRPQNLV KTIFVTGFNK SLSEDEMKTA LRAHFSACGE IKRISLPYYQ ETGDSKGVAY
201: LDFSEDGFNK AMELNGSELG GRNIVVIEAR PKEKNADRDS GRGNDDSSKK GPGRGNGEMR P
101: RLAKGIAHVE FASEEAAQKA LKLNGEPLLG RNILLDFANT KPAPRPQNLV KTIFVTGFNK SLSEDEMKTA LRAHFSACGE IKRISLPYYQ ETGDSKGVAY
201: LDFSEDGFNK AMELNGSELG GRNIVVIEAR PKEKNADRDS GRGNDDSSKK GPGRGNGEMR P
001: MGKSSKKSVT EVETPASMTK PLKKGKRDAE EDLDMQVTKK QKKELIDVVQ KEKAEKTVPK KVESSSSDAS DSDEEEKTKE TPSKLKDESS SEEEDDSSSD
101: EEIAPAKKRP EPIKKAKVES SSSDDDSTSD EETAPVKKQP AVLEKAKVES SSSDDDSSSD EETVPVKKQP AVLEKAKIES SSSDDDSSSD EETVPMKKQT
201: AVLEKAKAES SSSDDGSSSD EEPTPAKKEP IVVKKDSSDE SSSDEETPVV KKKPTTVVKD AKAESSSSEE ESSSDDEPTP AKKPTVVKNA KPAAKDSSSS
301: EEDSDEEESD DEKPPTKKAK VSSKTSKQES SSDESSDESD KEESKDEKVT PKKKDSDVEM VDAEQKSNAK QPKTPTNQTQ GGSKTLFAGN LSYQIARSDI
401: ENFFKEAGEV VDVRLSSFDD GSFKGYGHIE FASPEEAQKA LEMNGKLLLG RDVRLDLANE RGTPRNSNPG RKGEGSQSRT IYVRGFSSSL GEDEIKKELR
501: SHFSKCGEVT RVHVPTDRET GASRGFAYID LTSGFDEALQ LSGSEIGGGN IHVEESRPRD SDEGRSSNRA PARGAPRGRH SDRAPRGGRF SDRAPRGRHS
601: DRGAPRGRFS TRGRGPSKPS VMESSKGTKT VFNDEE
101: EEIAPAKKRP EPIKKAKVES SSSDDDSTSD EETAPVKKQP AVLEKAKVES SSSDDDSSSD EETVPVKKQP AVLEKAKIES SSSDDDSSSD EETVPMKKQT
201: AVLEKAKAES SSSDDGSSSD EEPTPAKKEP IVVKKDSSDE SSSDEETPVV KKKPTTVVKD AKAESSSSEE ESSSDDEPTP AKKPTVVKNA KPAAKDSSSS
301: EEDSDEEESD DEKPPTKKAK VSSKTSKQES SSDESSDESD KEESKDEKVT PKKKDSDVEM VDAEQKSNAK QPKTPTNQTQ GGSKTLFAGN LSYQIARSDI
401: ENFFKEAGEV VDVRLSSFDD GSFKGYGHIE FASPEEAQKA LEMNGKLLLG RDVRLDLANE RGTPRNSNPG RKGEGSQSRT IYVRGFSSSL GEDEIKKELR
501: SHFSKCGEVT RVHVPTDRET GASRGFAYID LTSGFDEALQ LSGSEIGGGN IHVEESRPRD SDEGRSSNRA PARGAPRGRH SDRAPRGGRF SDRAPRGRHS
601: DRGAPRGRFS TRGRGPSKPS VMESSKGTKT VFNDEE
Arabidopsis Description
NUCL2Nucleolin 2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEP5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.