Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005880.1-P | Field mustard | nucleus, plastid | 80.67 | 86.72 |
| Bra028741.1-P | Field mustard | nucleus | 79.33 | 85.06 |
| CDX80988 | Canola | plastid | 81.35 | 84.58 |
| CDY11354 | Canola | plastid | 82.02 | 84.3 |
| AT3G11520.1 | Thale cress | nucleus | 64.04 | 68.84 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 25.62 | 57.29 |
| AT1G34460.5 | Thale cress | cytosol | 63.37 | 56.63 |
| TraesCSU01G217300.1 | Wheat | cytosol | 27.19 | 56.02 |
| Zm00001d019469_P001 | Maize | extracellular | 17.53 | 54.55 |
| CDY14091 | Canola | plastid | 80.0 | 54.27 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 55.06 | 54.08 |
| KRH66713 | Soybean | nucleus | 55.06 | 53.96 |
| KRG95055 | Soybean | nucleus | 55.06 | 53.85 |
| KRH66715 | Soybean | nucleus | 47.19 | 53.57 |
| AT4G37490.1 | Thale cress | nucleus | 50.79 | 52.8 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 49.89 | 52.24 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 53.71 | 51.73 |
| Solyc10g078330.1.1 | Tomato | nucleus | 48.09 | 50.59 |
| KRH66718 | Soybean | plastid | 42.02 | 50.13 |
| PGSC0003DMT400018480 | Potato | nucleus | 47.87 | 50.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.26 | 49.66 |
| CDY04980 | Canola | nucleus | 80.0 | 49.58 |
| Solyc10g080950.1.1 | Tomato | nucleus | 51.01 | 49.13 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 50.11 | 48.8 |
| PGSC0003DMT400072211 | Potato | nucleus | 50.79 | 48.71 |
| AT2G26760.1 | Thale cress | nucleus | 42.25 | 48.58 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 47.19 | 48.28 |
| GSMUA_Achr10P... | Banana | nucleus | 48.99 | 48.12 |
| KRG95056 | Soybean | cytosol | 41.57 | 47.8 |
| EES03772 | Sorghum | nucleus, plastid | 48.09 | 47.66 |
| HORVU0Hr1G001680.1 | Barley | nucleus | 34.16 | 47.5 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 42.25 | 46.77 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 46.97 | 46.55 |
| KXG24389 | Sorghum | nucleus | 26.29 | 46.43 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 46.97 | 46.14 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 45.17 | 46.1 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 44.94 | 45.87 |
| TraesCS3D01G326600.1 | Wheat | nucleus | 46.74 | 45.71 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 42.92 | 45.48 |
| TraesCS3A01G333000.2 | Wheat | nucleus | 46.97 | 45.43 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 44.27 | 45.18 |
| TraesCS3B01G363200.3 | Wheat | nucleus | 46.74 | 45.12 |
| HORVU1Hr1G068080.1 | Barley | plastid | 34.61 | 45.03 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 43.82 | 44.62 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 43.6 | 44.29 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 43.82 | 44.02 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 43.82 | 44.02 |
| Zm00001d043164_P002 | Maize | nucleus | 47.42 | 43.59 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 42.7 | 43.58 |
| Os01t0281200-01 | Rice | nucleus | 40.0 | 42.08 |
| Zm00001d010656_P001 | Maize | nucleus | 42.02 | 41.93 |
| EES18429 | Sorghum | mitochondrion | 42.47 | 41.09 |
| TraesCS3A01G192100.1 | Wheat | nucleus, plastid | 38.2 | 41.06 |
| TraesCS3D01G195200.1 | Wheat | plastid | 37.98 | 40.92 |
| TraesCS7A01G229300.1 | Wheat | endoplasmic reticulum | 29.66 | 40.12 |
| Os05t0493500-00 | Rice | nucleus | 42.47 | 38.81 |
| EES02793 | Sorghum | nucleus | 39.55 | 38.01 |
| Zm00001d008221_P001 | Maize | nucleus | 40.22 | 37.37 |
| AT2G17620.1 | Thale cress | nucleus | 35.06 | 36.36 |
| AT4G35620.1 | Thale cress | nucleus | 34.38 | 35.66 |
| AT1G20610.1 | Thale cress | nucleus | 34.16 | 35.43 |
| Os02t0627800-00 | Rice | cytosol, mitochondrion, peroxisome | 31.01 | 34.85 |
| HORVU3Hr1G040990.2 | Barley | nucleus, plastid | 37.53 | 33.94 |
| AT1G47220.1 | Thale cress | nucleus | 24.49 | 33.33 |
| AT1G47210.2 | Thale cress | nucleus | 27.64 | 33.06 |
| AT5G43080.1 | Thale cress | nucleus | 26.29 | 32.96 |
| AT1G76310.3 | Thale cress | nucleus | 33.93 | 32.9 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 19.1 | 32.08 |
| Zm00001d020033_P001 | Maize | nucleus | 38.88 | 31.8 |
| Zm00001d020996_P001 | Maize | nucleus | 38.43 | 31.43 |
| AT1G47230.2 | Thale cress | nucleus, plastid | 24.94 | 30.0 |
| AT1G77390.1 | Thale cress | plastid | 26.29 | 26.47 |
| AT5G25380.4 | Thale cress | plastid | 26.29 | 26.41 |
| AT1G80370.1 | Thale cress | plastid | 27.19 | 26.25 |
| AT5G11300.1 | Thale cress | plastid | 25.39 | 25.92 |
| AT1G44110.1 | Thale cress | plastid | 26.52 | 25.65 |
| AT1G15570.1 | Thale cress | nucleus, plastid | 24.94 | 24.67 |
| AT1G16330.1 | Thale cress | nucleus | 31.24 | 21.45 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | EntrezGene:830502 | ProteinID:AED90976.1 | ArrayExpress:AT5G06150 | EnsemblPlantsGene:AT5G06150 |
| RefSeq:AT5G06150 | TAIR:AT5G06150 | RefSeq:AT5G06150-TAIR-G | EnsemblPlants:AT5G06150.1 | TAIR:AT5G06150.1 | Unigene:At.8011 |
| ProteinID:BAB09680.1 | Symbol:CYC1BAT | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0010332 | GO:GO:0051301 | EMBL:L27223 | RefSeq:NP_196233.1 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | PO:PO:0000293 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | UniProt:Q39067 |
| SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI000009DB66 | SEG:seg | : |
Description
CYCB1-2Cyclin-B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39067]
Coordinates
chr5:-:1859279..1861703
Molecular Weight (calculated)
49849.7 Da
IEP (calculated)
9.755
GRAVY (calculated)
-0.260
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRANVPEQ VRGAPLVDGL KIQNKNGAVK SRRALGDIGN LVSVPGVQGG KAQPPINRPI TRSFRAQLLA NAQLERKPIN GDNKVPALGP KRQPLAARNP
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.