Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97090 | Canola | nucleus | 83.26 | 83.26 |
| Bra008973.1-P | Field mustard | nucleus, plastid | 82.57 | 82.38 |
| CDX69768 | Canola | nucleus, plastid | 82.34 | 82.15 |
| AT5G25380.4 | Thale cress | plastid | 68.35 | 67.27 |
| VIT_04s0008g04260.t01 | Wine grape | nucleus, plastid | 50.69 | 55.11 |
| KRH16044 | Soybean | nucleus | 53.67 | 50.76 |
| KRH52524 | Soybean | nucleus | 52.52 | 48.83 |
| KRH61850 | Soybean | nucleus | 53.44 | 47.75 |
| KRH05060 | Soybean | nucleus | 50.0 | 47.49 |
| Solyc06g065680.2.1 | Tomato | nucleus, plastid | 51.15 | 46.95 |
| PGSC0003DMT400067117 | Potato | plastid | 50.23 | 44.06 |
| AT1G15570.1 | Thale cress | nucleus, plastid | 44.72 | 43.33 |
| AT1G80370.1 | Thale cress | plastid | 45.64 | 43.17 |
| AT1G47220.1 | Thale cress | nucleus | 32.34 | 43.12 |
| AT1G47230.2 | Thale cress | nucleus, plastid | 35.09 | 41.35 |
| AT1G47210.2 | Thale cress | nucleus | 34.63 | 40.59 |
| AT5G43080.1 | Thale cress | nucleus | 33.03 | 40.56 |
| AT1G44110.1 | Thale cress | plastid | 38.07 | 36.09 |
| AT1G77390.1 | Thale cress | plastid | 34.86 | 34.39 |
| AT2G26760.1 | Thale cress | nucleus | 27.06 | 30.49 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 18.35 | 30.19 |
| AT3G11520.1 | Thale cress | nucleus | 27.06 | 28.5 |
| AT2G17620.1 | Thale cress | nucleus | 27.75 | 28.21 |
| AT4G35620.1 | Thale cress | nucleus | 27.29 | 27.74 |
| AT1G20610.1 | Thale cress | nucleus | 26.83 | 27.27 |
| AT4G37490.1 | Thale cress | nucleus | 26.61 | 27.1 |
| AT1G76310.3 | Thale cress | nucleus | 27.29 | 25.93 |
| AT5G06150.1 | Thale cress | nucleus | 25.92 | 25.39 |
| AT1G16330.1 | Thale cress | nucleus | 26.83 | 18.06 |
| AT1G34460.5 | Thale cress | cytosol | 17.43 | 15.26 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | EntrezGene:831001 | UniProt:A0A178UDR8 | ProteinID:AED91657.1 | ArrayExpress:AT5G11300 |
| EnsemblPlantsGene:AT5G11300 | RefSeq:AT5G11300 | TAIR:AT5G11300 | RefSeq:AT5G11300-TAIR-G | EnsemblPlants:AT5G11300.1 | TAIR:AT5G11300.1 |
| Unigene:At.1678 | EMBL:BT026128 | ProteinID:CAB96665.1 | Symbol:CYC3B | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007049 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008283 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0051301 | GO:GO:2000123 | RefSeq:NP_568248.2 |
| ProteinID:OAO91760.1 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0002000 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009013 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF212 | UniProt:Q147G5 |
| SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI000016248B | EMBL:Z31402 | SEG:seg |
Description
CYCA2-2Cyclin-A2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q147G5]
Coordinates
chr5:-:3601513..3605350
Molecular Weight (calculated)
49696.7 Da
IEP (calculated)
6.782
GRAVY (calculated)
-0.309
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MYCSSSMHPN ANKENISTSD VQESFVRITR SRAKKAMGRG VSIPPTKPSF KQQKRRAVLK DVSNTSADII YSELRKGGNI KANRKCLKEP KKAAKEGANS
101: AMDILVDMHT EKSKLAEDLS KIRMAEAQDV SLSNFKDEEI TEQQEDGSGV MELLQVVDID SNVEDPQCCS LYAADIYDNI HVAELQQRPL ANYMELVQRD
201: IDPDMRKILI DWLVEVSDDY KLVPDTLYLT VNLIDRFLSN SYIERQRLQL LGVSCMLIAS KYEELSAPGV EEFCFITANT YTRPEVLSME IQILNFVHFR
301: LSVPTTKTFL RRFIKAAQAS YKVPFIELEY LANYLAELTL VEYSFLRFLP SLIAASAVFL ARWTLDQTDH PWNPTLQHYT RYEVAELKNT VLAMEDLQLN
401: TSGCTLAATR EKYNQPKFKS VAKLTSPKRV TSLFSR
101: AMDILVDMHT EKSKLAEDLS KIRMAEAQDV SLSNFKDEEI TEQQEDGSGV MELLQVVDID SNVEDPQCCS LYAADIYDNI HVAELQQRPL ANYMELVQRD
201: IDPDMRKILI DWLVEVSDDY KLVPDTLYLT VNLIDRFLSN SYIERQRLQL LGVSCMLIAS KYEELSAPGV EEFCFITANT YTRPEVLSME IQILNFVHFR
301: LSVPTTKTFL RRFIKAAQAS YKVPFIELEY LANYLAELTL VEYSFLRFLP SLIAASAVFL ARWTLDQTDH PWNPTLQHYT RYEVAELKNT VLAMEDLQLN
401: TSGCTLAATR EKYNQPKFKS VAKLTSPKRV TSLFSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.