Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 3
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66718 | Soybean | plastid | 90.95 | 48.53 |
| TraesCSU01G217300.1 | Wheat | cytosol | 47.24 | 43.52 |
| Zm00001d019469_P001 | Maize | extracellular | 30.15 | 41.96 |
| KRG95056 | Soybean | cytosol | 77.39 | 39.79 |
| KXG24389 | Sorghum | nucleus | 45.73 | 36.11 |
| KRH66715 | Soybean | nucleus | 66.83 | 33.93 |
| KRG95055 | Soybean | nucleus | 76.88 | 33.63 |
| KRH66713 | Soybean | nucleus | 76.38 | 33.48 |
| CDY62475 | Canola | nucleus | 56.28 | 31.91 |
| CDY69551 | Canola | nucleus | 56.28 | 31.55 |
| HORVU0Hr1G001680.1 | Barley | nucleus | 48.74 | 30.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.23 | 30.2 |
| KRH52056 | Soybean | nucleus | 30.65 | 28.91 |
| HORVU1Hr1G068080.1 | Barley | plastid | 49.25 | 28.66 |
| Bra002046.1-P | Field mustard | nucleus | 56.28 | 28.5 |
| Bra028741.1-P | Field mustard | nucleus | 59.3 | 28.43 |
| PGSC0003DMT400018480 | Potato | nucleus | 59.8 | 28.0 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 63.32 | 27.81 |
| Bra005880.1-P | Field mustard | nucleus, plastid | 57.79 | 27.78 |
| Solyc10g078330.1.1 | Tomato | nucleus | 58.79 | 27.66 |
| AT3G11520.1 | Thale cress | nucleus | 56.28 | 27.05 |
| KRH14611 | Soybean | nucleus | 58.79 | 26.65 |
| CDX80988 | Canola | plastid | 57.29 | 26.64 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 53.77 | 26.62 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 61.31 | 26.41 |
| KRH73516 | Soybean | nucleus | 58.29 | 26.36 |
| CDY11354 | Canola | plastid | 57.29 | 26.33 |
| AT5G06150.1 | Thale cress | nucleus | 57.29 | 25.62 |
| Solyc10g080950.1.1 | Tomato | nucleus | 59.3 | 25.54 |
| AT4G37490.1 | Thale cress | nucleus | 54.77 | 25.47 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 54.27 | 25.41 |
| PGSC0003DMT400072211 | Potato | nucleus | 58.79 | 25.22 |
| CDX69311 | Canola | nucleus | 52.76 | 25.06 |
| CDX75659 | Canola | nucleus | 52.76 | 24.53 |
| Bra011769.1-P | Field mustard | nucleus | 52.76 | 24.53 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 55.78 | 24.29 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 52.26 | 23.91 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 49.75 | 23.57 |
| GSMUA_Achr10P... | Banana | nucleus | 53.27 | 23.4 |
| TraesCS3A01G192100.1 | Wheat | nucleus, plastid | 48.24 | 23.19 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 50.75 | 23.17 |
| TraesCS3D01G195200.1 | Wheat | plastid | 47.74 | 23.0 |
| EES03772 | Sorghum | nucleus, plastid | 51.76 | 22.94 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 49.75 | 22.71 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 49.75 | 22.71 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 49.25 | 22.37 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 50.75 | 22.3 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 49.75 | 22.05 |
| TraesCS3D01G326600.1 | Wheat | nucleus | 50.25 | 21.98 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 48.74 | 21.9 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 48.74 | 21.9 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 47.74 | 21.74 |
| TraesCS3A01G333000.2 | Wheat | nucleus | 50.25 | 21.74 |
| TraesCS3B01G363200.3 | Wheat | nucleus | 50.25 | 21.69 |
| KRH61375 | Soybean | nucleus | 35.18 | 21.41 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 46.73 | 21.33 |
| EES18429 | Sorghum | mitochondrion | 48.74 | 21.09 |
| Os01t0281200-01 | Rice | nucleus | 44.72 | 21.04 |
| TraesCS7A01G229300.1 | Wheat | endoplasmic reticulum | 34.17 | 20.67 |
| Zm00001d010656_P001 | Maize | nucleus | 46.23 | 20.63 |
| Zm00001d043164_P002 | Maize | nucleus | 49.75 | 20.45 |
| EES02793 | Sorghum | nucleus | 46.73 | 20.09 |
| KRH61371 | Soybean | nucleus | 35.18 | 20.06 |
| Os05t0493500-00 | Rice | nucleus | 48.74 | 19.92 |
| KRH60628 | Soybean | nucleus | 40.2 | 19.75 |
| Zm00001d008221_P001 | Maize | nucleus | 47.24 | 19.62 |
| KRH76553 | Soybean | nucleus | 42.21 | 19.44 |
| KRH51329 | Soybean | nucleus, plastid | 40.2 | 19.28 |
| Os02t0627800-00 | Rice | cytosol, mitochondrion, peroxisome | 38.19 | 19.19 |
| KRH28901 | Soybean | nucleus | 41.21 | 18.94 |
| HORVU3Hr1G040990.2 | Barley | nucleus, plastid | 46.73 | 18.9 |
| KRH15427 | Soybean | nucleus, plastid | 34.17 | 18.68 |
| KRH05614 | Soybean | nucleus | 34.17 | 18.53 |
| KRH52055 | Soybean | nucleus | 33.17 | 18.44 |
| KRH61373 | Soybean | nucleus, plastid | 34.67 | 18.4 |
| CDY14091 | Canola | plastid | 59.3 | 17.99 |
| KRH16044 | Soybean | nucleus | 40.7 | 17.57 |
| KRH05060 | Soybean | nucleus | 40.2 | 17.43 |
| Zm00001d020033_P001 | Maize | nucleus | 47.24 | 17.28 |
| KRH52524 | Soybean | nucleus | 40.2 | 17.06 |
| Zm00001d020996_P001 | Maize | nucleus | 45.73 | 16.73 |
| KRH47513 | Soybean | nucleus | 39.2 | 16.39 |
| CDY04980 | Canola | nucleus | 58.79 | 16.3 |
| KRH61369 | Soybean | nucleus | 26.63 | 16.21 |
| KRH61850 | Soybean | nucleus | 39.7 | 16.19 |
| KRH44391 | Soybean | nucleus | 37.69 | 15.92 |
| KRH17986 | Soybean | plastid | 39.2 | 15.51 |
| KRH64625 | Soybean | plastid | 37.69 | 15.5 |
| KRH16410 | Soybean | plastid | 38.69 | 15.28 |
| KRH53279 | Soybean | plastid | 36.68 | 15.21 |
| AT1G34460.5 | Thale cress | cytosol | 35.18 | 14.06 |
| KRH44849 | Soybean | nucleus | 38.69 | 10.39 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:35.1 | UniProt:A0A0R0KI58 | EMBL:ACUP02002006 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_03G124200 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | EnsemblPlants:KRH66720 | ProteinID:KRH66720 | ProteinID:KRH66720.1 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0006ED6992 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:33695736..33699879
Molecular Weight (calculated)
23029.4 Da
IEP (calculated)
4.989
GRAVY (calculated)
0.319
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAILVDWLI QVQTKFELSL ETLYLTINIV DWFLAVKNVP KRELQLVGIS AVQMATKYEE IYPPQVHNFV FLSGRAYTHE QILIMEKIIL AKLDWTLTVP
101: IPLVFLLRFI KASVPDQELE NMAHFLSELG LMNYATEMYW PSMVAASAVF AARCTLNKAP LWNETLKLQT GYSQEQLMFM EDDACLLRQF LQIFFGLNA
101: IPLVFLLRFI KASVPDQELE NMAHFLSELG LMNYATEMYW PSMVAASAVF AARCTLNKAP LWNETLKLQT GYSQEQLMFM EDDACLLRQF LQIFFGLNA
001: MASSRVSDLP HQRGIAGEIK PKNVAGHGRQ NRKVLGDIGN LVTGRDVATG KDVAKKAKQP QQQTKAEVIV ISPDENEKCK PHFSRRTHIR GTKTFTATLR
101: ARSKAASGLK DAVIDIDAVD ANNELAAVEY VEDIFKFYRT VEEEGGIKDY IGSQPEINEK MRSILIDWLV DVHRKFELMP ETLYLTINLV DRFLSLTMVH
201: RRELQLLGLG AMLIACKYEE IWAPEVNDFV CISDNAYNRK QVLAMEKSIL GQVEWYITVP TPYVFLARYV KAAVPCDAEM EKLVFYLAEL GLMQYPIVVL
301: NRPSMLAASA VYAARQILKK TPFWTETLKH HTGYSEDEIM EHAKMLMKLR DSASESKLIA VFKKYSVSEN AEVALLPSLD DFSVSCA
101: ARSKAASGLK DAVIDIDAVD ANNELAAVEY VEDIFKFYRT VEEEGGIKDY IGSQPEINEK MRSILIDWLV DVHRKFELMP ETLYLTINLV DRFLSLTMVH
201: RRELQLLGLG AMLIACKYEE IWAPEVNDFV CISDNAYNRK QVLAMEKSIL GQVEWYITVP TPYVFLARYV KAAVPCDAEM EKLVFYLAEL GLMQYPIVVL
301: NRPSMLAASA VYAARQILKK TPFWTETLKH HTGYSEDEIM EHAKMLMKLR DSASESKLIA VFKKYSVSEN AEVALLPSLD DFSVSCA
Arabidopsis Description
CYCB1-4CYCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VPU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.