Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g049360.1.1 | Tomato | nucleus | 96.05 | 96.56 |
| OQU91386 | Sorghum | nucleus | 40.53 | 59.0 |
| VIT_03s0091g00280.t01 | Wine grape | nucleus | 49.47 | 55.13 |
| PGSC0003DMT400030222 | Potato | nucleus | 49.47 | 53.11 |
| PGSC0003DMT400030176 | Potato | nucleus | 48.95 | 52.25 |
| PGSC0003DMT400055428 | Potato | nucleus | 49.74 | 51.36 |
| TraesCS4B01G078300.1 | Wheat | nucleus | 49.21 | 50.4 |
| TraesCS4D01G076900.1 | Wheat | nucleus | 48.95 | 50.27 |
| HORVU4Hr1G013320.1 | Barley | nucleus | 49.21 | 50.13 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 37.63 | 50.0 |
| GSMUA_Achr10P... | Banana | nucleus | 41.58 | 49.84 |
| TraesCS4A01G236700.2 | Wheat | plastid | 48.68 | 49.33 |
| Zm00001d033365_P002 | Maize | nucleus | 46.32 | 47.31 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 47.89 | 46.55 |
| TraesCS5B01G078200.1 | Wheat | plastid | 45.53 | 45.89 |
| TraesCS5D01G084700.1 | Wheat | nucleus | 45.26 | 45.5 |
| TraesCS4D01G253200.1 | Wheat | nucleus | 29.21 | 45.49 |
| TraesCS5A01G072000.1 | Wheat | plastid | 45.0 | 45.48 |
| Zm00001d013744_P001 | Maize | nucleus | 42.63 | 45.38 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 42.11 | 44.44 |
| Os12t0581800-01 | Rice | nucleus, plastid | 44.74 | 44.16 |
| EES16237 | Sorghum | nucleus, plastid | 46.32 | 41.12 |
| Zm00001d030849_P001 | Maize | nucleus | 45.53 | 40.9 |
| Zm00001d041334_P001 | Maize | nucleus, plastid | 44.74 | 38.9 |
| EER95303 | Sorghum | nucleus, plastid | 38.95 | 38.85 |
| TraesCS4B01G254000.1 | Wheat | nucleus | 37.89 | 38.3 |
| PGSC0003DMT400075380 | Potato | nucleus | 23.68 | 37.97 |
| HORVU5Hr1G018820.2 | Barley | nucleus, plastid | 44.74 | 37.44 |
| TraesCS4A01G050700.1 | Wheat | nucleus | 37.11 | 37.11 |
| TraesCS4B01G253100.1 | Wheat | nucleus | 33.16 | 36.95 |
| TraesCS4D01G253900.1 | Wheat | nucleus | 36.84 | 36.84 |
| TraesCS4A01G051300.1 | Wheat | nucleus | 33.16 | 36.73 |
| HORVU4Hr1G069310.3 | Barley | nucleus | 38.68 | 35.42 |
| PGSC0003DMT400006576 | Potato | nucleus | 37.89 | 31.1 |
| PGSC0003DMT400015424 | Potato | plastid | 37.89 | 30.51 |
| PGSC0003DMT400067117 | Potato | plastid | 38.95 | 29.78 |
| Os03t0208700-00 | Rice | nucleus | 31.05 | 28.85 |
| Zm00001d048127_P001 | Maize | plastid | 36.32 | 28.81 |
| PGSC0003DMT400093973 | Potato | nucleus | 25.0 | 28.79 |
| Os03t0607600-00 | Rice | nucleus | 42.37 | 26.48 |
| PGSC0003DMT400058457 | Potato | nucleus | 26.84 | 24.4 |
| PGSC0003DMT400048062 | Potato | nucleus | 27.37 | 24.13 |
| PGSC0003DMT400018480 | Potato | nucleus | 26.84 | 24.0 |
| PGSC0003DMT400003868 | Potato | nucleus | 27.11 | 23.79 |
| PGSC0003DMT400015245 | Potato | nucleus | 27.37 | 23.69 |
| PGSC0003DMT400025854 | Potato | nucleus | 27.11 | 23.36 |
| PGSC0003DMT400072211 | Potato | nucleus | 25.53 | 20.91 |
| Os03t0208800-00 | Rice | nucleus | 14.47 | 13.85 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:102589578 | MapMan:13.1.1.1.1 | InterPro:Cyclin-A_plant | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| UniProt:M1BZP5 | PFAM:PF00134 | PFAM:PF02984 | EnsemblPlantsGene:PGSC0003DMG400022017 | PGSC:PGSC0003DMG400022017 | EnsemblPlants:PGSC0003DMT400056625 |
| PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF270 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI00029549AE | RefSeq:XP_006356489.1 | SEG:seg | : | : |
Description
Cyclin A3 [Source:PGSC_GENE;Acc:PGSC0003DMG400022017]
Coordinates
chr10:+:41086484..41092193
Molecular Weight (calculated)
43241.7 Da
IEP (calculated)
5.686
GRAVY (calculated)
-0.238
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDEENKVPA AAASSRGSNK RAFDSIAITN ENDPLQISER PYPANKKRVV LGELNNLGNV AVSTQNSDLT ETHESKRKIK LRKTTTRNVV KETVEPETSA
101: NSSPKDNLQK CSYGPLIYQH LHSLEVEERR RPLSNYMEKV QNNVIPSMRT VLVDWLVEVT EEYKLVSDTL YLAVSYIDRF LSSHVLAMDK LQLLGVSCML
201: VASKYEEISP PHVEDFCYIT DNTYTREEVV NMERDLLSFL NFEISSPTTT TFLRIFIKVA QDNFPFLTLQ FEFLSCYLAE LSLLDYSCVR FLPSMTAASA
301: IFLSRFTVLP EVCPWTLALQ QSTGYKPSEL KDCVLVIHEL QSSRMEATGR ALREKYMNHK YKCVAALHPP DIPACFFDDA
101: NSSPKDNLQK CSYGPLIYQH LHSLEVEERR RPLSNYMEKV QNNVIPSMRT VLVDWLVEVT EEYKLVSDTL YLAVSYIDRF LSSHVLAMDK LQLLGVSCML
201: VASKYEEISP PHVEDFCYIT DNTYTREEVV NMERDLLSFL NFEISSPTTT TFLRIFIKVA QDNFPFLTLQ FEFLSCYLAE LSLLDYSCVR FLPSMTAASA
301: IFLSRFTVLP EVCPWTLALQ QSTGYKPSEL KDCVLVIHEL QSSRMEATGR ALREKYMNHK YKCVAALHPP DIPACFFDDA
001: MAENQNCARM TRAAAKRKAS SMALDENPVS KKRVVLGELP NMSNVVAVPN QERETLKAKT SVNTSKRQMK KALMIPEASV LIESRSVDPQ MCEPFASDIC
101: AYLREMEGKP KHRPLPDYIE KVQSDLTPHM RAVLVDWLVE VAEEYKLVSD TLYLTISYVD RFLSVKPINR QKLQLVGVSA MLIASKYEEI GPPKVEDFCY
201: ITDNTFTKQE VVSMEADILL ALQFELGSPT IKTFLRRFTR VAQEDFKDSQ LQIEFLCCYL SELSMLDYTC VKYLPSLLSA SAVFLARFII RPKQHPWNQM
301: LEEYTKYKAA DLQVCVGIIH DLYLSRRGNT LEAVRNKYKQ HKYKCVATMP VSPELPLAFF EDITIRGMA
101: AYLREMEGKP KHRPLPDYIE KVQSDLTPHM RAVLVDWLVE VAEEYKLVSD TLYLTISYVD RFLSVKPINR QKLQLVGVSA MLIASKYEEI GPPKVEDFCY
201: ITDNTFTKQE VVSMEADILL ALQFELGSPT IKTFLRRFTR VAQEDFKDSQ LQIEFLCCYL SELSMLDYTC VKYLPSLLSA SAVFLARFII RPKQHPWNQM
301: LEEYTKYKAA DLQVCVGIIH DLYLSRRGNT LEAVRNKYKQ HKYKCVATMP VSPELPLAFF EDITIRGMA
Arabidopsis Description
CYCA3-4Cyclin-A3-4 [Source:UniProtKB/Swiss-Prot;Acc:Q3ECW2]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.