CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012999_P001	Maize	cytosol	46.37	95.82
Os03t0815200-01	Rice	cytosol, extracellular, nucleus, plasma membrane	92.24	92.09
TraesCS5B01G481000.1	Wheat	cytosol	90.73	90.57
TraesCS5A01G468400.1	Wheat	cytosol, golgi, unclear	90.39	90.24
TraesCS5D01G481300.1	Wheat	cytosol	90.39	90.24
HORVU5Hr1G111620.1	Barley	cytosol	90.22	90.07
Zm00001d034602_P003	Maize	cytosol	94.6	89.76
GSMUA_Achr11P...	Banana	cytosol	80.27	85.92
GSMUA_Achr7P21790_001	Banana	cytosol	85.5	85.21
VIT_15s0024g00070.t01	Wine grape	cytosol	82.29	82.15
KRH64810	Soybean	cytosol, endoplasmic reticulum, nucleus	82.29	81.88
KRH56478	Soybean	cytosol, nucleus	81.96	81.68
PGSC0003DMT400041701	Potato	cytosol	81.62	81.48
Solyc11g008870.1.1	Tomato	extracellular, plastid	81.62	81.48
PGSC0003DMT400060046	Potato	cytosol	81.79	81.24
Solyc05g055730.2.1	Tomato	cytosol, unclear	81.28	80.87
AT2G44160.1	Thale cress	cytosol	79.09	78.96
CDX79777	Canola	cytosol	78.92	78.66
CDX98401	Canola	cytosol	78.41	78.55
CDY17879	Canola	cytosol	78.58	78.45
CDX67820	Canola	cytosol	78.25	78.38
Bra003397.1-P	Field mustard	cytosol	78.25	78.38
Bra004810.1-P	Field mustard	cytosol	73.36	78.24
CDY41193	Canola	cytosol	77.91	78.04
CDX71855	Canola	cytosol	77.91	78.04
AT3G59970.3	Thale cress	cytosol	77.74	77.87
Bra007497.1-P	Field mustard	cytosol	77.74	77.87
CDY30457	Canola	cytosol	76.9	76.64
CDY23420	Canola	cytosol	76.73	76.47
Bra037664.1-P	Field mustard	cytosol	76.73	76.47
Zm00001d042247_P001	Maize	extracellular, golgi	13.15	66.67
Zm00001d013002_P001	Maize	golgi, mitochondrion	12.82	64.96
VIT_05s0094g01600.t01	Wine grape	cytosol	8.94	64.63

Protein Annotations

KEGG:00670+1.5.1.20	KEGG:00720+1.5.1.20	Gene3D:3.20.20.220	MapMan:7.5.7.4	EntrezGene:8057390	UniProt:C5WVY7
EnsemblPlants:EER90654	ProteinID:EER90654	ProteinID:EER90654.1	InterPro:FAD-linked_oxidoreductase-like	InterPro:Fadh2_euk	GO:GO:0003674
GO:GO:0003824	GO:GO:0004489	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006555	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0035999	GO:GO:0055114	InterPro:Mehydrof_redctse	PFAM:PF02219	PANTHER:PTHR21091
PANTHER:PTHR21091:SF31	MetaCyc:PWY-2201	MetaCyc:PWY-3841	EnsemblPlantsGene:SORBI_3001G040100	SUPFAM:SSF51730	unigene:Sbi.17773
TIGRFAMs:TIGR00677	UniParc:UPI0001A8200B	RefSeq:XP_002463656.1	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:2981544..2987118

Molecular Weight (calculated)

66344.4 Da

IEP (calculated)

5.887

GRAVY (calculated)

-0.277

Length

593 amino acids

Sequence
(BLAST)

001: MKVIEKIQEA AGNGRTAFSF EYFPPKTEEG VENLFERMDR MVAHGPSFCD ITWGAGGSTA DLTLEIANRM QNMVCVETMM HLTCTNMPVE KIDHALETIK
101: SNGIQNVLAL RGDPPHGQDK FVQVEGGFAC ALDLVQHIRA KYGDYFGITV AGYPEAHPDA IQGEGGATLE AYSNDLAYLK RKVDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGITCPIVPG IMPINNYKGF LRMTGFCKTK IPSEITAALD PIKDNEEAVK QYGIHLGTEM CKKILATGIK TLHLYTLNMD KSAIGILMNL
301: GLIEESKVSR PLPWRPATNV FRVKEDVRPI FWANRPKSYL KRTLGWDQYP HGRWGDSRNP SYGALTDHQF TRPRGRGKKL QEEWAVPLKS VEDISERFTN
401: FCQGKLTSSP WSELDGLQPE TKIIDDQLVK INQKGFLTIN SQPAVNGEKS DSPTVGWGGP GGYVYQKAYL EFFCAKEKLD QLIEKIKAFP SLTYIAVNKD
501: GESFSNIAPN AVNAVTWGVF PGKEIIQPTV VDPASFMVWK DEAFEIWTRG WACLFPEGDS SRELLEKVQK SYYLVSLVDN DYVQGDLFAA FKI

Best Arabidopsis Sequence Match ( AT2G44160.1 )
(BLAST)

001: MKVIDKIQSL ADEGKTAFSF EFFPPKTEDG VDNLFERMDR MVAYGPTFCD ITWGAGGSTA DLTLDIASRM QNVVCVESMM HLTCTNMPVE KIDHALETIR
101: SNGIQNVLAL RGDPPHGQDK FVQVEGGFDC ALDLVNHIRS KYGDYFGITV AGYPEAHPDV IGENGLASNE AYQSDLEYLK KKIDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGISCPIVPG IMPINNYRGF LRMTGFCKTK IPVEVMAALE PIKDNEEAVK AYGIHLGTEM CKKMLAHGVK SLHLYTLNME KSALAILMNL
301: GMIDESKISR SLPWRRPANV FRTKEDVRPI FWANRPKSYI SRTKGWEDFP QGRWGDSRSA SYGALSDHQF SRPRARDKKL QQEWVVPLKS VEDIQEKFKE
401: LCLGNLKSSP WSELDGLQPE TRIINEQLIK VNSKGFLTIN SQPSVNAERS DSPTVGWGGP VGYVYQKAYL EFFCSKEKLD AVVEKCKALP SITYMAVNKG
501: EQWVSNTAQA DVNAVTWGVF PAKEIIQPTI VDPASFNVWK DEAFETWSRS WANLYPEADP SRNLLEEVKN SYYLVSLVEN DYINGDIFAV FADL

Arabidopsis Description

MTHFR2Methylenetetrahydrofolate reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:O80585]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.