Factsheet for GSMUA_Achr7P21790_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	86.89	93.32
Zm00001d012999_P001	Maize	cytosol	41.68	86.41
EER90654	Sorghum	cytosol	85.21	85.5
Os03t0815200-01	Rice	cytosol, extracellular, nucleus, plasma membrane	85.04	85.19
TraesCS5B01G481000.1	Wheat	cytosol	84.2	84.34
TraesCS5D01G481300.1	Wheat	cytosol	84.2	84.34
TraesCS5A01G468400.1	Wheat	cytosol, golgi, unclear	84.2	84.34
HORVU5Hr1G111620.1	Barley	cytosol	84.03	84.18
VIT_15s0024g00070.t01	Wine grape	cytosol	83.19	83.33
Solyc11g008870.1.1	Tomato	extracellular, plastid	83.19	83.33
PGSC0003DMT400041701	Potato	cytosol	83.03	83.17
KRH64810	Soybean	cytosol, endoplasmic reticulum, nucleus	82.18	82.05
KRH56478	Soybean	cytosol, nucleus	81.85	81.85
PGSC0003DMT400060046	Potato	cytosol	81.51	81.24
Solyc05g055730.2.1	Tomato	cytosol, unclear	81.34	81.21
Bra004810.1-P	Field mustard	cytosol	74.45	79.68
CDX79777	Canola	cytosol	79.5	79.5
CDY17879	Canola	cytosol	78.82	78.96
AT2G44160.1	Thale cress	cytosol	78.66	78.79
Zm00001d034602_P003	Maize	cytosol	82.52	78.56
CDY41193	Canola	cytosol	78.15	78.55
Bra007497.1-P	Field mustard	cytosol	78.15	78.55
CDX71855	Canola	cytosol	77.98	78.38
CDX67820	Canola	cytosol	77.65	78.04
Bra003397.1-P	Field mustard	cytosol	77.65	78.04
AT3G59970.3	Thale cress	cytosol	77.48	77.87
CDX98401	Canola	cytosol	77.48	77.87
CDY30457	Canola	cytosol	77.31	77.31
CDY23420	Canola	cytosol	77.14	77.14
Bra037664.1-P	Field mustard	cytosol	77.14	77.14
VIT_05s0094g01600.t01	Wine grape	cytosol	8.91	64.63
Zm00001d042247_P001	Maize	extracellular, golgi	11.09	56.41
Zm00001d013002_P001	Maize	golgi, mitochondrion	10.76	54.7

Protein Annotations

KEGG:00670+1.5.1.20	KEGG:00720+1.5.1.20	Gene3D:3.20.20.220	MapMan:7.5.7.4	InterPro:FAD-linked_oxidoreductase-like	InterPro:Fadh2_euk
GO:GO:0003674	GO:GO:0003824	GO:GO:0004489	GO:GO:0006555	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0035999	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G21790_001	EnsemblPlants:GSMUA_Achr7P21790_001
EnsemblPlants:GSMUA_Achr7T21790_001	UniProt:M0TJL5	InterPro:Mehydrof_redctse	PFAM:PF02219	PANTHER:PTHR21091	PANTHER:PTHR21091:SF31
SUPFAM:SSF51730	TIGRFAMs:TIGR00677	UniParc:UPI0002948B50	SEG:seg	:	:

Description

Probable methylenetetrahydrofolate reductase [Source:GMGC_GENE;Acc:GSMUA_Achr7G21790_001]

Coordinates

chr7:-:24481094..24487897

Molecular Weight (calculated)

66866.0 Da

IEP (calculated)

6.162

GRAVY (calculated)

-0.273

Length

595 amino acids

Sequence
(BLAST)

001: MKVIDKIRAA TEGDGRTVFS FEFFPPKTEE GVENLFERMD RMVAHNPTFC DITWGAGGST ADLTLDIANR MQNMICVETM MHLTCTNMPV EKIDHALDTI
101: KANGIQNVLA LRGDPPHGQD KFVQVAGGFA CALDLVQHIR AKYGDYFGIT VAGYPEAHPD MIQGDGGATL EAYNSDLAYL KRKVDAGADL IITQLFYDTD
201: NFLKFVNDCR QIGINCPIVP GIMPINNYKG FLRMTGFCKT KIPSEITAAL EPIKDNEEAV RAYGIHLGTE MCRKILAHGI KTLHLYTLNM EKSALAILMN
301: FGLIEESKVS RSLPWRRPAN IFRVKEDVRP IFWANRPKSY ISRTVGWDQY PHGRWGDSNN PSYGALTDYQ FMRPRSRDKK FQEEWATPLK SAADINERFM
401: KFCLGKLRSS PWSELDGLQP ETKIIDEQLS QVNLKGFLTI NSQPAVNGEK SDSSAVGWGG PGGYVYQKAY LEFFCSKDKL NLIIEKCKTL PSLTYIAVNK
501: EGDSVSNVAP NAVNAVTWGI FPGKEIIQPT VVDPASFMIW KDEAFEIWSR GWARLFPEGD PSRELLEQAQ RSYYLVSLVD NDYIHGDIFA AFKDI

Best Arabidopsis Sequence Match ( AT2G44160.1 )
(BLAST)

001: MKVIDKIQSL ADEGKTAFSF EFFPPKTEDG VDNLFERMDR MVAYGPTFCD ITWGAGGSTA DLTLDIASRM QNVVCVESMM HLTCTNMPVE KIDHALETIR
101: SNGIQNVLAL RGDPPHGQDK FVQVEGGFDC ALDLVNHIRS KYGDYFGITV AGYPEAHPDV IGENGLASNE AYQSDLEYLK KKIDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGISCPIVPG IMPINNYRGF LRMTGFCKTK IPVEVMAALE PIKDNEEAVK AYGIHLGTEM CKKMLAHGVK SLHLYTLNME KSALAILMNL
301: GMIDESKISR SLPWRRPANV FRTKEDVRPI FWANRPKSYI SRTKGWEDFP QGRWGDSRSA SYGALSDHQF SRPRARDKKL QQEWVVPLKS VEDIQEKFKE
401: LCLGNLKSSP WSELDGLQPE TRIINEQLIK VNSKGFLTIN SQPSVNAERS DSPTVGWGGP VGYVYQKAYL EFFCSKEKLD AVVEKCKALP SITYMAVNKG
501: EQWVSNTAQA DVNAVTWGVF PAKEIIQPTI VDPASFNVWK DEAFETWSRS WANLYPEADP SRNLLEEVKN SYYLVSLVEN DYINGDIFAV FADL

Arabidopsis Description

MTHFR2Methylenetetrahydrofolate reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:O80585]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.