Factsheet for Zm00001d012999_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90654	Sorghum	cytosol	95.82	46.37
GSMUA_Achr11P...	Banana	cytosol	86.41	44.77
Os03t0815200-01	Rice	cytosol, extracellular, nucleus, plasma membrane	91.29	44.11
Zm00001d034602_P003	Maize	cytosol	95.82	44.0
HORVU5Hr1G111620.1	Barley	cytosol	88.85	42.93
TraesCS5D01G481300.1	Wheat	cytosol	88.5	42.76
TraesCS5B01G481000.1	Wheat	cytosol	88.5	42.76
TraesCS5A01G468400.1	Wheat	cytosol, golgi, unclear	88.5	42.76
GSMUA_Achr7P21790_001	Banana	cytosol	86.41	41.68
KRH64810	Soybean	cytosol, endoplasmic reticulum, nucleus	84.67	40.77
VIT_15s0024g00070.t01	Wine grape	cytosol	83.97	40.57
KRH56478	Soybean	cytosol, nucleus	83.97	40.5
PGSC0003DMT400060046	Potato	cytosol	83.97	40.37
Solyc05g055730.2.1	Tomato	cytosol, unclear	83.28	40.1
PGSC0003DMT400041701	Potato	cytosol	82.23	39.73
Solyc11g008870.1.1	Tomato	extracellular, plastid	82.23	39.73
CDX98401	Canola	cytosol	81.88	39.7
CDX67820	Canola	cytosol	81.88	39.7
Bra003397.1-P	Field mustard	cytosol	81.88	39.7
AT3G59970.3	Thale cress	cytosol	81.18	39.36
AT2G44160.1	Thale cress	cytosol	80.84	39.06
CDX79777	Canola	cytosol	80.49	38.82
CDY41193	Canola	cytosol	79.79	38.68
CDX71855	Canola	cytosol	79.79	38.68
Bra007497.1-P	Field mustard	cytosol	79.79	38.68
CDY30457	Canola	cytosol	80.14	38.66
CDY23420	Canola	cytosol	79.79	38.49
Bra037664.1-P	Field mustard	cytosol	79.79	38.49
CDY17879	Canola	cytosol	79.44	38.38
Bra004810.1-P	Field mustard	cytosol	69.34	35.79
VIT_05s0094g01600.t01	Wine grape	cytosol	2.79	9.76
Zm00001d013002_P001	Maize	golgi, mitochondrion	3.14	7.69
Zm00001d042247_P001	Maize	extracellular, golgi	3.14	7.69

Protein Annotations

KEGG:00670+1.5.1.20	KEGG:00720+1.5.1.20	Gene3D:3.20.20.220	MapMan:7.5.7.4	UniProt:A0A1D6GER4	ProteinID:AQK62072.1
InterPro:FAD-linked_oxidoreductase-like	InterPro:Fadh2_euk	GO:GO:0003674	GO:GO:0003824	GO:GO:0004489	GO:GO:0006555
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0035999	GO:GO:0055114	InterPro:Mehydrof_redctse
PFAM:PF02219	PANTHER:PTHR21091	PANTHER:PTHR21091:SF31	SUPFAM:SSF51730	TIGRFAMs:TIGR00677	UniParc:UPI000843BC3B
EnsemblPlantsGene:Zm00001d012999	EnsemblPlants:Zm00001d012999_P001	EnsemblPlants:Zm00001d012999_T001	:	:	:

Description

Methylenetetrahydrofolate reductase 2

Coordinates

chr5:+:2930870..2933511

Molecular Weight (calculated)

31749.4 Da

IEP (calculated)

6.623

GRAVY (calculated)

-0.166

Length

287 amino acids

Sequence
(BLAST)

001: MPVEKIDHAL ETIKFNGIHN VLALRGDPPH GQDKFVQVEG GFACALDLVQ HIRSKYGDYF GITVAGYPEA HPDAIQGEGG ATLEAYSNDL AYLKRKVDAG
101: ADLIVTQLFY DTDIFLKFVN DCRQIGITCP IVPGIMPINN YKGFMRMTGF CKTKIPSEIT AALDPIKDNE EAVRAYGIHL GTEMCKKIIA SGIKTLHLYT
201: LNVDKSALGI LMFTRPRGRG KKLQEEWAVP LKSVEGISER FTNFCQGKLT SSPWSELDGL QPETKIIDDQ LVKINQKGFL TINSEPA

Best Arabidopsis Sequence Match ( AT3G59970.2 )
(BLAST)

001: MKVVDKIKSV TEQGQTAFSF EFFPPKTEDG VENLFERMDR LVSYGPTFCD ITWGAGGSTA DLTLEIASRM QNVICVETMM HLTCTNMPIE KIDHALETIR
101: SNGIQNVLAL RGDPPHGQDK FVQVEGGFAC ALDLVNHIRS KYGDYFGITV AGYPEAHPDV IEADGLATPE SYQSDLAYLK KKVDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGINCPIVPG IMPISNYKGF LRMAGFCKTK IPAELTAALE PIKDNDEAVK AYGIHFATEM CKKILAHGIT SLHLYTLNVD KSAIGILMNL
301: GLIDESKISR SLPWRRPANV FRTKEDVRPI FWANRPKSYI SRTKGWNDFP HGRWGDSHSA AYSTLSDYQF ARPKGRDKKL QQEWVVPLKS IEDVQERIGY
401: QTPVSPM

Arabidopsis Description

MTHFR1Methylenetetrahydrofolate reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SE60]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.