Factsheet for VIT_15s0024g00070.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g008870.1.1	Tomato	extracellular, plastid	84.51	84.51
PGSC0003DMT400041701	Potato	cytosol	84.51	84.51
Zm00001d012999_P001	Maize	cytosol	40.57	83.97
GSMUA_Achr11P...	Banana	cytosol	77.78	83.39
GSMUA_Achr7P21790_001	Banana	cytosol	83.33	83.19
PGSC0003DMT400060046	Potato	cytosol	83.17	82.75
Solyc05g055730.2.1	Tomato	cytosol, unclear	82.83	82.55
Os03t0815200-01	Rice	cytosol, extracellular, nucleus, plasma membrane	82.49	82.49
EER90654	Sorghum	cytosol	82.15	82.29
TraesCS5A01G468400.1	Wheat	cytosol, golgi, unclear	81.14	81.14
TraesCS5B01G481000.1	Wheat	cytosol	81.14	81.14
TraesCS5D01G481300.1	Wheat	cytosol	81.14	81.14
HORVU5Hr1G111620.1	Barley	cytosol	80.98	80.98
Zm00001d034602_P003	Maize	cytosol	79.12	75.2
VIT_05s0094g01600.t01	Wine grape	cytosol	9.26	67.07
Zm00001d042247_P001	Maize	extracellular, golgi	9.93	50.43
Zm00001d013002_P001	Maize	golgi, mitochondrion	9.6	48.72

Protein Annotations

KEGG:00670+1.5.1.20	KEGG:00720+1.5.1.20	EntrezGene:100259124	wikigene:100259124	Gene3D:3.20.20.220	MapMan:7.5.7.4
EMBL:AM434780	ProteinID:CAN82572	ProteinID:CAN82572.1	ProteinID:CCB62205	ProteinID:CCB62205.1	UniProt:F6I5I7
InterPro:FAD-linked_oxidoreductase-like	EMBL:FN596748	InterPro:Fadh2_euk	GO:GO:0003674	GO:GO:0003824	GO:GO:0004489
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006555
GO:GO:0006730	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0035999
GO:GO:0055114	EntrezGene:LOC100259124	wikigene:LOC100259124	InterPro:Mehydrof_redctse	PFAM:PF02219	PANTHER:PTHR21091
PANTHER:PTHR21091:SF31	SUPFAM:SSF51730	TIGR:TC53168	TIGR:TC59555	TIGR:TC61975	TIGRFAMs:TIGR00677
UniParc:UPI00019838C7	ArrayExpress:VIT_15s0024g00070	EnsemblPlantsGene:VIT_15s0024g00070	EnsemblPlants:VIT_15s0024g00070.t01	unigene:Vvi.2221	RefSeq:XP_002272730
RefSeq:XP_002272730.1	:	:	:	:	:

Description

Methylenetetrahydrofolate reductase [Source:UniProtKB/TrEMBL;Acc:F6I5I7]

Coordinates

chr15:-:150042..160420

Molecular Weight (calculated)

66907.3 Da

IEP (calculated)

5.827

GRAVY (calculated)

-0.221

Length

594 amino acids

Sequence
(BLAST)

001: MKVIEKIRDA ATEEGKVVFS FEFFPPKTED GVDNLFERMD RMVAHGPAFC DITWGAGGST ADLTLEISNK MQNMICVETM MHLTCTNMPV EKIDHALDTI
101: KSNGIQNVLA LRGDPPHGQD KFVQIQGGFA CALDLVQHIR AKYGDYFGIT VAGYPEAHPD VILNGVATSE AYQSDLAYLK RKVDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGITCPIVPG IMPINNYKGF LRMTGFCKTK IPSEVTAALE PIKDNDEAVK AYGIHLGTEM CKKILAHGIK TVHLYTLNME KSALAILMNL
301: GLIEESKISR PFPWRRPTNV FRVKEDVRPI FWANRPRSYI SRTIGWDQYP HGRWSDSCNP SYGGLTDYQF MRPRARDKKL QDEWVVPLKS IEDVQERFIK
401: FCLGKLKSSP WSELDGLQPE SKIINELLGN INSKGFLTIN SQPAVNGEKS DSLSVGWGGP GGYVYQKAYL EFFCSREKLN ALVDKCKGHT SLTYMAVNKE
501: GTWMSNVGPG EVNAVTWGVF PAREIIQPTV VDPSSFMVWK DEAFEIWSRG WALLYPEDDP SRKLLEEVQN SHFLVSLVDN DYINGDLFAI FMEF

Best Arabidopsis Sequence Match ( AT2G44160.1 )
(BLAST)

001: MKVIDKIQSL ADEGKTAFSF EFFPPKTEDG VDNLFERMDR MVAYGPTFCD ITWGAGGSTA DLTLDIASRM QNVVCVESMM HLTCTNMPVE KIDHALETIR
101: SNGIQNVLAL RGDPPHGQDK FVQVEGGFDC ALDLVNHIRS KYGDYFGITV AGYPEAHPDV IGENGLASNE AYQSDLEYLK KKIDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGISCPIVPG IMPINNYRGF LRMTGFCKTK IPVEVMAALE PIKDNEEAVK AYGIHLGTEM CKKMLAHGVK SLHLYTLNME KSALAILMNL
301: GMIDESKISR SLPWRRPANV FRTKEDVRPI FWANRPKSYI SRTKGWEDFP QGRWGDSRSA SYGALSDHQF SRPRARDKKL QQEWVVPLKS VEDIQEKFKE
401: LCLGNLKSSP WSELDGLQPE TRIINEQLIK VNSKGFLTIN SQPSVNAERS DSPTVGWGGP VGYVYQKAYL EFFCSKEKLD AVVEKCKALP SITYMAVNKG
501: EQWVSNTAQA DVNAVTWGVF PAKEIIQPTI VDPASFNVWK DEAFETWSRS WANLYPEADP SRNLLEEVKN SYYLVSLVEN DYINGDIFAV FADL

Arabidopsis Description

MTHFR2Methylenetetrahydrofolate reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:O80585]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.