Factsheet for Zm00001d013002_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

mitochondrion 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042247_P001	Maize	extracellular, golgi	97.44	97.44
VIT_05s0094g01600.t01	Wine grape	cytosol	29.06	41.46
EER90654	Sorghum	cytosol	64.96	12.82
Os03t0815200-01	Rice	cytosol, extracellular, nucleus, plasma membrane	61.54	12.12
Zm00001d034602_P003	Maize	cytosol	63.25	11.84
HORVU5Hr1G111620.1	Barley	cytosol	59.83	11.78
TraesCS5D01G481300.1	Wheat	cytosol	58.12	11.45
TraesCS5B01G481000.1	Wheat	cytosol	58.12	11.45
TraesCS5A01G468400.1	Wheat	cytosol, golgi, unclear	58.12	11.45
GSMUA_Achr11P...	Banana	cytosol	51.28	10.83
GSMUA_Achr7P21790_001	Banana	cytosol	54.7	10.76
Bra004810.1-P	Field mustard	cytosol	48.72	10.25
CDX98401	Canola	cytosol	51.28	10.14
CDX67820	Canola	cytosol	50.43	9.97
Bra003397.1-P	Field mustard	cytosol	50.43	9.97
CDY17879	Canola	cytosol	50.43	9.93
CDX79777	Canola	cytosol	50.43	9.92
AT3G59970.3	Thale cress	cytosol	49.57	9.8
KRH64810	Soybean	cytosol, endoplasmic reticulum, nucleus	49.57	9.73
CDX71855	Canola	cytosol	48.72	9.63
CDY41193	Canola	cytosol	48.72	9.63
Bra007497.1-P	Field mustard	cytosol	48.72	9.63
AT2G44160.1	Thale cress	cytosol	48.72	9.6
Solyc11g008870.1.1	Tomato	extracellular, plastid	48.72	9.6
VIT_15s0024g00070.t01	Wine grape	cytosol	48.72	9.6
KRH56478	Soybean	cytosol, nucleus	48.72	9.58
PGSC0003DMT400041701	Potato	cytosol	47.86	9.43
Solyc05g055730.2.1	Tomato	cytosol, unclear	47.86	9.4
PGSC0003DMT400060046	Potato	cytosol	47.86	9.38
Bra037664.1-P	Field mustard	cytosol	46.15	9.08
CDY23420	Canola	cytosol	46.15	9.08
CDY30457	Canola	cytosol	46.15	9.08
Zm00001d012999_P001	Maize	cytosol	7.69	3.14

Protein Annotations

EnsemblPlants:Zm00001d013002_P001	EnsemblPlants:Zm00001d013002_T001	EnsemblPlantsGene:Zm00001d013002	ProteinID:AQK62073.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI000221F71A	UniProt:A0A1D6GER5	MapMan:35.1	:	:	:

Description

Methylenetetrahydrofolate reductase 2

Coordinates

chr5:+:2973947..2975342

Molecular Weight (calculated)

12374.7 Da

IEP (calculated)

8.190

GRAVY (calculated)

0.125

Length

117 amino acids

Sequence
(BLAST)

001: MAAGIGGQDW RVRNRGGAWL AAVIGGELGA WRAAFCAFLA AVIGGGGWGG PGGYVYQKAY LEFFCAKEKL YDQLIEKIKA FPSLTFIAVN KDGESFSNIA
101: PNAANAVTWG GLPWQGD

Best Arabidopsis Sequence Match ( AT3G59970.3 )
(BLAST)

001: MKVVDKIKSV TEQGQTAFSF EFFPPKTEDG VENLFERMDR LVSYGPTFCD ITWGAGGSTA DLTLEIASRM QNVICVETMM HLTCTNMPIE KIDHALETIR
101: SNGIQNVLAL RGDPPHGQDK FVQVEGGFAC ALDLVNHIRS KYGDYFGITV AGYPEAHPDV IEADGLATPE SYQSDLAYLK KKVDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGINCPIVPG IMPISNYKGF LRMAGFCKTK IPAELTAALE PIKDNDEAVK AYGIHFATEM CKKILAHGIT SLHLYTLNVD KSAIGILMNL
301: GLIDESKISR SLPWRRPANV FRTKEDVRPI FWANRPKSYI SRTKGWNDFP HGRWGDSHSA AYSTLSDYQF ARPKGRDKKL QQEWVVPLKS IEDVQEKFKE
401: LCIGNLKSSP WSELDGLQPE TKIINEQLGK INSNGFLTIN SQPSVNAAKS DSPAIGWGGP GGYVYQKAYL EFFCSKDKLD TLVEKSKAFP SITYMAVNKS
501: ENWVSNTGES DVNAVTWGVF PAKEVIQPTI VDPASFKVWK DEAFEIWSRS WANLYPEDDP SRKLLEEVKN SYYLVSLVDN NYINGDIFSV FA

Arabidopsis Description

MTHFR1Methylenetetrahydrofolate reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SE60]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.