Factsheet for Bra004810.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79777	Canola	cytosol	99.1	92.61
AT2G44160.1	Thale cress	cytosol	93.7	87.71
Bra037664.1-P	Field mustard	cytosol	91.73	85.71
Bra003397.1-P	Field mustard	cytosol	84.17	79.05
Bra007497.1-P	Field mustard	cytosol	84.17	79.05
PGSC0003DMT400041701	Potato	cytosol	80.04	74.92
GSMUA_Achr7P21790_001	Banana	cytosol	79.68	74.45
Solyc11g008870.1.1	Tomato	extracellular, plastid	79.5	74.41
KRH64810	Soybean	cytosol, endoplasmic reticulum, nucleus	79.32	73.99
KRH56478	Soybean	cytosol, nucleus	78.96	73.78
EER90654	Sorghum	cytosol	78.24	73.36
GSMUA_Achr11P...	Banana	cytosol	72.84	73.1
Os03t0815200-01	Rice	cytosol, extracellular, nucleus, plasma membrane	78.06	73.06
HORVU5Hr1G111620.1	Barley	cytosol	77.7	72.73
TraesCS5B01G481000.1	Wheat	cytosol	77.7	72.73
Solyc05g055730.2.1	Tomato	cytosol, unclear	77.7	72.48
TraesCS5A01G468400.1	Wheat	cytosol, golgi, unclear	77.34	72.39
TraesCS5D01G481300.1	Wheat	cytosol	77.34	72.39
PGSC0003DMT400060046	Potato	cytosol	77.7	72.36
Zm00001d012999_P001	Maize	cytosol	35.79	69.34
Zm00001d034602_P003	Maize	cytosol	74.82	66.56
VIT_05s0094g01600.t01	Wine grape	cytosol	8.81	59.76
Zm00001d042247_P001	Maize	extracellular, golgi	10.61	50.43
Zm00001d013002_P001	Maize	golgi, mitochondrion	10.25	48.72

Protein Annotations

KEGG:00670+1.5.1.20	KEGG:00720+1.5.1.20	Gene3D:3.20.20.220	MapMan:7.5.7.4	EnsemblPlantsGene:Bra004810	EnsemblPlants:Bra004810.1
EnsemblPlants:Bra004810.1-P	InterPro:FAD-linked_oxidoreductase-like	InterPro:Fadh2_euk	GO:GO:0003674	GO:GO:0003824	GO:GO:0004489
GO:GO:0006555	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0035999
GO:GO:0055114	UniProt:M4CKS5	InterPro:Mehydrof_redctse	PFAM:PF02219	PANTHER:PTHR21091	PANTHER:PTHR21091:SF31
SUPFAM:SSF51730	TIGRFAMs:TIGR00677	UniParc:UPI0002547C55	:	:	:

Description

AT2G44160 (E=2e-120) MTHFR2 | MTHFR2 (METHYLENETETRAHYDROFOLATE REDUCTASE 2); methylenetetrahydrofolate reductase (NADPH)

Coordinates

chrA05:+:1915442..1918534

Molecular Weight (calculated)

62219.2 Da

IEP (calculated)

5.415

GRAVY (calculated)

-0.277

Length

556 amino acids

Sequence
(BLAST)

001: MKVIDKIQSL ADEGKTAFSF EFFPPKTEDG VDNLFERMDR MVAYGPTFCD ITWGAGGSTA DLTLDIASRM QNVVCVESMM HLTCTNMPVE KIDHALETIR
101: ANGIQNVLAL RGDPPHGHDK FVKVEGGFGC ALDLVNHVRG KYEAHPDVIG ENGLASDEAY QSDLEYLKRK VDAGADLIVT QLFYDTDVFL KFVNDCRQIG
201: IKCPIVPGIM PINNYKGFLR MTGFCKTKIP AEVMAALEPI QDNEEAVKAY GIHLGTEMCR KILAHGTKSL HLYTLNMEKS ALAILMNLGM IDESKISRSL
301: PWRRPANVFR TKEDVRPIFW ANRPKSYISR TKGWEDFPQG RWGDSRSASY GALTDHQRFR ELCLGNLKSS PWSELDGLQP ETKIINEQLV KLNSKGCLTI
401: NSQPSVNAER SDSSTVGWGG PGGYVYQKAY LEFFCSKEKL DAIVEKCKAL PSITYIAVNK GDNWVSNTAQ SDVNAVTWGV FPAKEIIQPT IVDPASFKVW
501: KDEAFETWSR SWANLYPEAA DPSRNLLEEV KNSYYLVSLV ENDYINGDIF SVFADL

Best Arabidopsis Sequence Match ( AT2G44160.1 )
(BLAST)

001: MKVIDKIQSL ADEGKTAFSF EFFPPKTEDG VDNLFERMDR MVAYGPTFCD ITWGAGGSTA DLTLDIASRM QNVVCVESMM HLTCTNMPVE KIDHALETIR
101: SNGIQNVLAL RGDPPHGQDK FVQVEGGFDC ALDLVNHIRS KYGDYFGITV AGYPEAHPDV IGENGLASNE AYQSDLEYLK KKIDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGISCPIVPG IMPINNYRGF LRMTGFCKTK IPVEVMAALE PIKDNEEAVK AYGIHLGTEM CKKMLAHGVK SLHLYTLNME KSALAILMNL
301: GMIDESKISR SLPWRRPANV FRTKEDVRPI FWANRPKSYI SRTKGWEDFP QGRWGDSRSA SYGALSDHQF SRPRARDKKL QQEWVVPLKS VEDIQEKFKE
401: LCLGNLKSSP WSELDGLQPE TRIINEQLIK VNSKGFLTIN SQPSVNAERS DSPTVGWGGP VGYVYQKAYL EFFCSKEKLD AVVEKCKALP SITYMAVNKG
501: EQWVSNTAQA DVNAVTWGVF PAKEIIQPTI VDPASFNVWK DEAFETWSRS WANLYPEADP SRNLLEEVKN SYYLVSLVEN DYINGDIFAV FADL

Arabidopsis Description

MTHFR2Methylenetetrahydrofolate reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:O80585]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.