Factsheet for Zm00001d042247_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

mitochondrion 3
golgi 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013002_P001	Maize	golgi, mitochondrion	97.44	97.44
VIT_05s0094g01600.t01	Wine grape	cytosol	29.06	41.46
EER90654	Sorghum	cytosol	66.67	13.15
Os03t0815200-01	Rice	cytosol, extracellular, nucleus, plasma membrane	63.25	12.46
Zm00001d034602_P003	Maize	cytosol	64.96	12.16
HORVU5Hr1G111620.1	Barley	cytosol	61.54	12.12
TraesCS5D01G481300.1	Wheat	cytosol	59.83	11.78
TraesCS5B01G481000.1	Wheat	cytosol	59.83	11.78
TraesCS5A01G468400.1	Wheat	cytosol, golgi, unclear	59.83	11.78
GSMUA_Achr7P21790_001	Banana	cytosol	56.41	11.09
GSMUA_Achr11P...	Banana	cytosol	52.14	11.01
Bra004810.1-P	Field mustard	cytosol	50.43	10.61
CDX98401	Canola	cytosol	52.99	10.47
Bra003397.1-P	Field mustard	cytosol	52.14	10.3
CDX67820	Canola	cytosol	52.14	10.3
CDY17879	Canola	cytosol	52.14	10.27
CDX79777	Canola	cytosol	52.14	10.25
AT3G59970.3	Thale cress	cytosol	51.28	10.14
CDY41193	Canola	cytosol	50.43	9.97
CDX71855	Canola	cytosol	50.43	9.97
Bra007497.1-P	Field mustard	cytosol	50.43	9.97
AT2G44160.1	Thale cress	cytosol	50.43	9.93
VIT_15s0024g00070.t01	Wine grape	cytosol	50.43	9.93
KRH64810	Soybean	cytosol, endoplasmic reticulum, nucleus	50.43	9.9
PGSC0003DMT400041701	Potato	cytosol	49.57	9.76
Solyc11g008870.1.1	Tomato	extracellular, plastid	49.57	9.76
KRH56478	Soybean	cytosol, nucleus	49.57	9.75
Solyc05g055730.2.1	Tomato	cytosol, unclear	49.57	9.73
PGSC0003DMT400060046	Potato	cytosol	49.57	9.72
Bra037664.1-P	Field mustard	cytosol	47.86	9.41
CDY30457	Canola	cytosol	47.86	9.41
CDY23420	Canola	cytosol	47.86	9.41
Zm00001d012999_P001	Maize	cytosol	7.69	3.14

Protein Annotations

EnsemblPlants:Zm00001d042247_P001	EnsemblPlants:Zm00001d042247_T001	EnsemblPlantsGene:Zm00001d042247	ProteinID:ONM34853.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002218533	UniProt:A0A1D6N2B1	MapMan:35.1	:	:	:

Description

Methylenetetrahydrofolate reductase 2

Coordinates

chr3:-:157429918..157431004

Molecular Weight (calculated)

12404.8 Da

IEP (calculated)

8.190

GRAVY (calculated)

0.195

Length

117 amino acids

Sequence
(BLAST)

001: MAVGIGGQDW RVRNRGGAWL AAVIGGELGA WRAAFCAFLA AVIGGGGWGG PGGYVYQKAY LEFFCAKEKL YDQLIEKIKA FPSLTFIAVN KDGESFSNIA
101: PNAVNAVTWG GLAWQGD

Best Arabidopsis Sequence Match ( AT3G59970.3 )
(BLAST)

001: MKVVDKIKSV TEQGQTAFSF EFFPPKTEDG VENLFERMDR LVSYGPTFCD ITWGAGGSTA DLTLEIASRM QNVICVETMM HLTCTNMPIE KIDHALETIR
101: SNGIQNVLAL RGDPPHGQDK FVQVEGGFAC ALDLVNHIRS KYGDYFGITV AGYPEAHPDV IEADGLATPE SYQSDLAYLK KKVDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGINCPIVPG IMPISNYKGF LRMAGFCKTK IPAELTAALE PIKDNDEAVK AYGIHFATEM CKKILAHGIT SLHLYTLNVD KSAIGILMNL
301: GLIDESKISR SLPWRRPANV FRTKEDVRPI FWANRPKSYI SRTKGWNDFP HGRWGDSHSA AYSTLSDYQF ARPKGRDKKL QQEWVVPLKS IEDVQEKFKE
401: LCIGNLKSSP WSELDGLQPE TKIINEQLGK INSNGFLTIN SQPSVNAAKS DSPAIGWGGP GGYVYQKAYL EFFCSKDKLD TLVEKSKAFP SITYMAVNKS
501: ENWVSNTGES DVNAVTWGVF PAKEVIQPTI VDPASFKVWK DEAFEIWSRS WANLYPEDDP SRKLLEEVKN SYYLVSLVDN NYINGDIFSV FA

Arabidopsis Description

MTHFR1Methylenetetrahydrofolate reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SE60]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.