Factsheet for AT3G59970.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67820	Canola	cytosol	96.28	96.28
Bra003397.1-P	Field mustard	cytosol	96.11	96.11
CDX98401	Canola	cytosol	96.11	96.11
Bra007497.1-P	Field mustard	cytosol	94.59	94.59
CDY41193	Canola	cytosol	94.59	94.59
CDX71855	Canola	cytosol	94.09	94.09
AT2G44160.1	Thale cress	cytosol	85.98	85.69
Zm00001d012999_P001	Maize	cytosol	39.36	81.18
KRH56478	Soybean	cytosol, nucleus	79.56	79.16
KRH64810	Soybean	cytosol, endoplasmic reticulum, nucleus	79.39	78.86
Solyc11g008870.1.1	Tomato	extracellular, plastid	78.38	78.11
PGSC0003DMT400041701	Potato	cytosol	78.38	78.11
EER90654	Sorghum	cytosol	77.87	77.74
GSMUA_Achr7P21790_001	Banana	cytosol	77.87	77.48
GSMUA_Achr11P...	Banana	cytosol	72.3	77.26
PGSC0003DMT400060046	Potato	cytosol	77.7	77.05
Os03t0815200-01	Rice	cytosol, extracellular, nucleus, plasma membrane	77.2	76.94
Solyc05g055730.2.1	Tomato	cytosol, unclear	77.36	76.85
TraesCS5B01G481000.1	Wheat	cytosol	76.35	76.09
TraesCS5A01G468400.1	Wheat	cytosol, golgi, unclear	76.01	75.76
TraesCS5D01G481300.1	Wheat	cytosol	76.01	75.76
HORVU5Hr1G111620.1	Barley	cytosol	75.68	75.42
Zm00001d034602_P003	Maize	cytosol	75.17	71.2
VIT_05s0094g01600.t01	Wine grape	cytosol	7.77	56.1
Zm00001d042247_P001	Maize	extracellular, golgi	10.14	51.28
Zm00001d013002_P001	Maize	golgi, mitochondrion	9.8	49.57

Protein Annotations

KEGG:00670+1.5.1.20	KEGG:00720+1.5.1.20	Gene3D:3.20.20.220	MapMan:7.5.7.4	EntrezGene:825167	UniProt:A0A178VC94
ProteinID:AEE79992.1	ProteinID:AEE79994.1	EMBL:AF181966	ArrayExpress:AT3G59970	EnsemblPlantsGene:AT3G59970	RefSeq:AT3G59970
TAIR:AT3G59970	RefSeq:AT3G59970-TAIR-G	EnsemblPlants:AT3G59970.3	TAIR:AT3G59970.3	EMBL:AY070034	EMBL:AY122922
Unigene:At.1168	ProteinID:CAB75816.1	InterPro:FAD-linked_oxidoreductase-like	InterPro:Fadh2_euk	GO:GO:0003674	GO:GO:0003824
GO:GO:0004489	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006555	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009086
GO:GO:0009987	GO:GO:0016491	GO:GO:0035999	GO:GO:0055114	Symbol:MTHFR1	InterPro:MTHF_reductase_bac
InterPro:Mehydrof_redctse	RefSeq:NP_191556.1	RefSeq:NP_850723.1	ProteinID:OAP03930.1	PFAM:PF02219	PO:PO:0000293
PO:PO:0007131	PO:PO:0009001	PO:PO:0009025	PANTHER:PTHR21091	PANTHER:PTHR21091:SF31	UniProt:Q9SE60
SUPFAM:SSF51730	TIGRFAMs:TIGR00676	TIGRFAMs:TIGR00677	UniParc:UPI00000A2995	:	:

Description

MTHFR1Methylenetetrahydrofolate reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SE60]

Coordinates

chr3:+:22151164..22154483

Molecular Weight (calculated)

66291.9 Da

IEP (calculated)

5.561

GRAVY (calculated)

-0.278

Length

592 amino acids

Sequence
(BLAST)

001: MKVVDKIKSV TEQGQTAFSF EFFPPKTEDG VENLFERMDR LVSYGPTFCD ITWGAGGSTA DLTLEIASRM QNVICVETMM HLTCTNMPIE KIDHALETIR
101: SNGIQNVLAL RGDPPHGQDK FVQVEGGFAC ALDLVNHIRS KYGDYFGITV AGYPEAHPDV IEADGLATPE SYQSDLAYLK KKVDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGINCPIVPG IMPISNYKGF LRMAGFCKTK IPAELTAALE PIKDNDEAVK AYGIHFATEM CKKILAHGIT SLHLYTLNVD KSAIGILMNL
301: GLIDESKISR SLPWRRPANV FRTKEDVRPI FWANRPKSYI SRTKGWNDFP HGRWGDSHSA AYSTLSDYQF ARPKGRDKKL QQEWVVPLKS IEDVQEKFKE
401: LCIGNLKSSP WSELDGLQPE TKIINEQLGK INSNGFLTIN SQPSVNAAKS DSPAIGWGGP GGYVYQKAYL EFFCSKDKLD TLVEKSKAFP SITYMAVNKS
501: ENWVSNTGES DVNAVTWGVF PAKEVIQPTI VDPASFKVWK DEAFEIWSRS WANLYPEDDP SRKLLEEVKN SYYLVSLVDN NYINGDIFSV FA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.