Factsheet for GSMUA_Achr11P10550_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P21790_001	Banana	cytosol	93.32	86.89
Zm00001d012999_P001	Maize	cytosol	44.77	86.41
Os03t0815200-01	Rice	cytosol, extracellular, nucleus, plasma membrane	86.28	80.47
EER90654	Sorghum	cytosol	85.92	80.27
TraesCS5B01G481000.1	Wheat	cytosol	85.02	79.29
HORVU5Hr1G111620.1	Barley	cytosol	85.02	79.29
TraesCS5D01G481300.1	Wheat	cytosol	84.84	79.12
TraesCS5A01G468400.1	Wheat	cytosol, golgi, unclear	84.84	79.12
Solyc11g008870.1.1	Tomato	extracellular, plastid	83.94	78.28
PGSC0003DMT400041701	Potato	cytosol	83.94	78.28
VIT_15s0024g00070.t01	Wine grape	cytosol	83.39	77.78
KRH64810	Soybean	cytosol, endoplasmic reticulum, nucleus	83.39	77.52
KRH56478	Soybean	cytosol, nucleus	82.85	77.14
PGSC0003DMT400060046	Potato	cytosol	81.95	76.05
Solyc05g055730.2.1	Tomato	cytosol, unclear	81.77	76.01
AT2G44160.1	Thale cress	cytosol	78.88	73.57
CDX79777	Canola	cytosol	78.88	73.45
Zm00001d034602_P003	Maize	cytosol	82.85	73.44
CDY41193	Canola	cytosol	78.34	73.31
CDX71855	Canola	cytosol	78.16	73.14
Bra007497.1-P	Field mustard	cytosol	78.16	73.14
CDY17879	Canola	cytosol	78.16	72.9
Bra004810.1-P	Field mustard	cytosol	73.1	72.84
CDX67820	Canola	cytosol	77.62	72.64
Bra003397.1-P	Field mustard	cytosol	77.62	72.64
CDX98401	Canola	cytosol	77.44	72.47
AT3G59970.3	Thale cress	cytosol	77.26	72.3
CDY30457	Canola	cytosol	77.44	72.1
CDY23420	Canola	cytosol	77.26	71.93
Bra037664.1-P	Field mustard	cytosol	77.26	71.93
VIT_05s0094g01600.t01	Wine grape	cytosol	9.57	64.63
Zm00001d042247_P001	Maize	extracellular, golgi	11.01	52.14
Zm00001d013002_P001	Maize	golgi, mitochondrion	10.83	51.28

Protein Annotations

KEGG:00670+1.5.1.20	KEGG:00720+1.5.1.20	Gene3D:3.20.20.220	MapMan:7.5.7.4	InterPro:FAD-linked_oxidoreductase-like	InterPro:Fadh2_euk
GO:GO:0003674	GO:GO:0003824	GO:GO:0004489	GO:GO:0006555	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0035999	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr11G10550_001	EnsemblPlants:GSMUA_Achr11P10550_001
EnsemblPlants:GSMUA_Achr11T10550_001	UniProt:M0RR35	InterPro:Mehydrof_redctse	PFAM:PF02219	PANTHER:PTHR21091	PANTHER:PTHR21091:SF31
SUPFAM:SSF51730	TIGRFAMs:TIGR00677	UniParc:UPI000295E340	SEG:seg	:	:

Description

Probable methylenetetrahydrofolate reductase [Source:GMGC_GENE;Acc:GSMUA_Achr11G10550_001]

Coordinates

chr11:+:8352006..8358835

Molecular Weight (calculated)

61928.4 Da

IEP (calculated)

6.580

GRAVY (calculated)

-0.222

Length

554 amino acids

Sequence
(BLAST)

001: MVAHNPNFCD ITWGAGGSTA DLTLDIANRM QNMICVETMM HLTCTNMPVE KIDHALDTIK ANGIQNVLAL RGDPPHGQDK FVQVAGGFAC ALDLVQHIRA
101: KYGDYFGITV AGYPEAHPDM IQGDGGATQE AYNNDLAYLK RKVDAGADLI ITQLFYDTDI FLKFVNDCRQ IGITCPIVPG IMPINNYKGF LRMTGFCKTK
201: IPPEITAALD PIKDNEDAVR AYGVHLGTEM CKKILSHGIK TLHLYTLNME KSALAILMNL GLIEESKVSR SLPWRRPANV FRVKEDVRPI FWANRPKSYI
301: SRTVGWDQYP HGRWGDSNNP SYGALTDYQF MRPRSRDKKL QEEWATPLKS VDDINERFMK FCLGKLRSSP WSELDGLQPE TKIINEQLSQ VNLKGFLTIN
401: SQPPVNGEKS DSPAVGWGGP GGYVYQKAYL EFFCSKDKLI SITENCKALP SLTYIAVNKE GEYVSNVVLN AVNAVTWGVF PGKEIIQPTV VDPASFMIWK
501: DEAFEIWTRG WARLFPEGDP SRELLAQVQK SCFLVSLVDN DYIHGDIFAA FKGA

Best Arabidopsis Sequence Match ( AT2G44160.1 )
(BLAST)

001: MKVIDKIQSL ADEGKTAFSF EFFPPKTEDG VDNLFERMDR MVAYGPTFCD ITWGAGGSTA DLTLDIASRM QNVVCVESMM HLTCTNMPVE KIDHALETIR
101: SNGIQNVLAL RGDPPHGQDK FVQVEGGFDC ALDLVNHIRS KYGDYFGITV AGYPEAHPDV IGENGLASNE AYQSDLEYLK KKIDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGISCPIVPG IMPINNYRGF LRMTGFCKTK IPVEVMAALE PIKDNEEAVK AYGIHLGTEM CKKMLAHGVK SLHLYTLNME KSALAILMNL
301: GMIDESKISR SLPWRRPANV FRTKEDVRPI FWANRPKSYI SRTKGWEDFP QGRWGDSRSA SYGALSDHQF SRPRARDKKL QQEWVVPLKS VEDIQEKFKE
401: LCLGNLKSSP WSELDGLQPE TRIINEQLIK VNSKGFLTIN SQPSVNAERS DSPTVGWGGP VGYVYQKAYL EFFCSKEKLD AVVEKCKALP SITYMAVNKG
501: EQWVSNTAQA DVNAVTWGVF PAKEIIQPTI VDPASFNVWK DEAFETWSRS WANLYPEADP SRNLLEEVKN SYYLVSLVEN DYINGDIFAV FADL

Arabidopsis Description

MTHFR2Methylenetetrahydrofolate reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:O80585]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.