CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30457	Canola	cytosol	99.5	99.5
CDX79777	Canola	cytosol	92.1	92.1
CDY17879	Canola	cytosol	91.6	91.75
AT2G44160.1	Thale cress	cytosol	91.43	91.58
CDX67820	Canola	cytosol	83.53	83.95
CDX98401	Canola	cytosol	83.36	83.78
CDY41193	Canola	cytosol	83.03	83.45
CDX71855	Canola	cytosol	82.35	82.77
Zm00001d012999_P001	Maize	cytosol	38.49	79.79
PGSC0003DMT400041701	Potato	cytosol	78.49	78.62
KRH64810	Soybean	cytosol, endoplasmic reticulum, nucleus	78.32	78.19
Solyc11g008870.1.1	Tomato	extracellular, plastid	77.98	78.11
KRH56478	Soybean	cytosol, nucleus	77.98	77.98
GSMUA_Achr11P...	Banana	cytosol	71.93	77.26
GSMUA_Achr7P21790_001	Banana	cytosol	77.14	77.14
Os03t0815200-01	Rice	cytosol, extracellular, nucleus, plasma membrane	76.64	76.77
EER90654	Sorghum	cytosol	76.47	76.73
HORVU5Hr1G111620.1	Barley	cytosol	75.8	75.93
TraesCS5B01G481000.1	Wheat	cytosol	75.8	75.93
TraesCS5A01G468400.1	Wheat	cytosol, golgi, unclear	75.63	75.76
TraesCS5D01G481300.1	Wheat	cytosol	75.63	75.76
Solyc05g055730.2.1	Tomato	cytosol, unclear	75.8	75.67
PGSC0003DMT400060046	Potato	cytosol	75.8	75.54
Zm00001d034602_P003	Maize	cytosol	73.95	70.4
VIT_05s0094g01600.t01	Wine grape	cytosol	8.24	59.76
Zm00001d042247_P001	Maize	extracellular, golgi	9.41	47.86
Zm00001d013002_P001	Maize	golgi, mitochondrion	9.08	46.15

Protein Annotations

KEGG:00670+1.5.1.20	KEGG:00720+1.5.1.20	Gene3D:3.20.20.220	MapMan:7.5.7.4	GO:A0A078GAF4	UniProt:A0A078GAF4
EnsemblPlants:CDY23420	ProteinID:CDY23420	ProteinID:CDY23420.1	InterPro:FAD-linked_oxidoreductase-like	InterPro:Fadh2_euk	GO:GO:0003674
GO:GO:0003824	GO:GO:0004489	GO:GO:0006555	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0035999	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00022029001	InterPro:Mehydrof_redctse	PFAM:PF02219
PANTHER:PTHR21091	PANTHER:PTHR21091:SF31	MetaCyc:PWY-2201	MetaCyc:PWY-3841	SUPFAM:SSF51730	TIGRFAMs:TIGR00677
UniPathway:UPA00193	UniParc:UPI0004EEE339	:	:	:	:

Description

BnaC04g49480DMethylenetetrahydrofolate reductase [Source:UniProtKB/TrEMBL;Acc:A0A078GAF4]

Coordinates

chrLK032143:+:360253..363074

Molecular Weight (calculated)

66980.1 Da

IEP (calculated)

5.892

GRAVY (calculated)

-0.283

Length

595 amino acids

Sequence
(BLAST)

001: MKVIDKIKSW TDEGKTTFSF EFFPPRTEDG VDNLFERMDR LVAYGPAFCD ITWGAGGSTA DLTLDIVSRM QNVVCVESMM HLTCTNMPVE KIDHALETIR
101: SNGIQNVLAL RGDPPHGENK FVQVEGGFGC ALDLVNHIRS KYGDYFGVAV AGYPEAHPDV IGENGLASKE AYQSDLEYLK KKVDAGADLI VTQLFFDTDM
201: LLKFVNDCRQ IGIKCPIVPG IMPINNYKGF LRMIGFCKTK IPAEVMAALE PIQDNEEAVK AYGIHLGTEM CKKILAHGIK SLHLYTLNME KSALSILMNL
301: GMIEESKISR SLPWRRPANV FRIKEDVRPI FWANRPKSYI SRTKAWENFP QGRWGDSRSA SYGALTDHQF SRPRARDKKL QQEWVVPLKS VEDIHEKFKE
401: LCLGNLKSSP WSELDGLQPE TKIINEQLVK VNSKGFLTIN SQPSVNAERS DSSTVGWGGP GGYVYQKAYL EFFCSKDKLD ALVEICKALP SITYIAMNKG
501: ETWVSNTSQS DVNAVTWGVF PAKEIIQPTI VDPSSFNVWK DEAFETWSRN WANLYPEAAD PSRNLLEEVK NSYYLVSLVE NDYINGNIFK VFSDL

Best Arabidopsis Sequence Match ( AT2G44160.1 )
(BLAST)

001: MKVIDKIQSL ADEGKTAFSF EFFPPKTEDG VDNLFERMDR MVAYGPTFCD ITWGAGGSTA DLTLDIASRM QNVVCVESMM HLTCTNMPVE KIDHALETIR
101: SNGIQNVLAL RGDPPHGQDK FVQVEGGFDC ALDLVNHIRS KYGDYFGITV AGYPEAHPDV IGENGLASNE AYQSDLEYLK KKIDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGISCPIVPG IMPINNYRGF LRMTGFCKTK IPVEVMAALE PIKDNEEAVK AYGIHLGTEM CKKMLAHGVK SLHLYTLNME KSALAILMNL
301: GMIDESKISR SLPWRRPANV FRTKEDVRPI FWANRPKSYI SRTKGWEDFP QGRWGDSRSA SYGALSDHQF SRPRARDKKL QQEWVVPLKS VEDIQEKFKE
401: LCLGNLKSSP WSELDGLQPE TRIINEQLIK VNSKGFLTIN SQPSVNAERS DSPTVGWGGP VGYVYQKAYL EFFCSKEKLD AVVEKCKALP SITYMAVNKG
501: EQWVSNTAQA DVNAVTWGVF PAKEIIQPTI VDPASFNVWK DEAFETWSRS WANLYPEADP SRNLLEEVKN SYYLVSLVEN DYINGDIFAV FADL

Arabidopsis Description

MTHFR2Methylenetetrahydrofolate reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:O80585]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.